| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is sseA [H]
Identifier: 17546945
GI number: 17546945
Start: 2414197
End: 2415087
Strand: Direct
Name: sseA [H]
Synonym: RSc2226
Alternate gene names: 17546945
Gene position: 2414197-2415087 (Clockwise)
Preceding gene: 17546944
Following gene: 17546950
Centisome position: 64.96
GC content: 72.39
Gene sequence:
>891_bases ATGAGCGAACGCGCACCCCGCTATGCCACGCTGATCACCGCACCCCAGCTCGCCGCGCTGCAGCAGAGCGCGCCCCGCAG CACGATCGTGTTCGACTGCAGCTTCGATCTGGCCAACCCGGCCGCCGGGCGCGAGGCGTATCGCGCGAGCCACATCCCCG GGGCGTTCTACCTGCACCTGGACAACGAGCTGTCGGGACCCAAGACCGGCACCAACGGCCGCCATCCGCTGCCCGATGCC GATGCCTTCGTCGCCCGCATGCGCGCGCTGGGCGTGAACGACGACACCCAGGTCGTCGCCTGCGACCGGCAGGCCGGCAT GTTCGCCGCGCGGCTGTGGTGGCTGATGCGCTGGGTCGGCCATGCCGACGTCGCCGTACTCGACGGCGGCCTGCCGGCCT GGGAGGCTGCGCGTCTGCCGGTCGACAGCGTGGTGCCCGACGAACTGCAACTGAGCACCGCACCGGGCAACCTGAGCCGC AAGCCGTCCCTGGTGCCGCTGATGACGGCCGGCCTGGTGCTCAAGCGCCTGGGCCAGCCGGCCCTGCCGATCATCGACGC CCGCGCGCCGGACCGCTACCGCGGCGAGAACGAGACCCTCGACCCGGTCGGCGGCCACATCCCCGGCGCGCGCAACCGCT TCTTCCGCGACAACCTGCAGGCCGACGGCACCTTCAAGCCCGCGGCCCAGCTGCGCAGCGATTTCGAGGCCGTGCTGGCC GGCGCCCGGCCGGAAGACGCCGTGCTGCAATGCGGCTCGGGGGTGACCGCCAGCCACAACCTGCTGGCAATGGAAGTGGC CGGGCTGCCCGGCGCCGCGCTCTATGCCGGCTCGTGGAGCGAATGGGTCAGCGACCCCTCGCGCCCGGTGGCGACCGGAC CGAATCCATGA
Upstream 100 bases:
>100_bases CGGGCGTTGCGCATCCGACACCGCAGACCGCCGTGTCGGGGCCGGAAGCCGAGATCCACCCGGAAGTCTGATTCCGACTC TTCGATCCAGGAGATTGCCT
Downstream 100 bases:
>100_bases CGCCGGGCCCCGGCGCGACCAGCAAAAAGCCCGGCAATGCCGGGCTTTTTTTCATGCGGTTCCGCTCACCGGACCATCAA TGCGCGTGGTGGTGCAGACC
Product: thiosulfate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSERAPRYATLITAPQLAALQQSAPRSTIVFDCSFDLANPAAGREAYRASHIPGAFYLHLDNELSGPKTGTNGRHPLPDA DAFVARMRALGVNDDTQVVACDRQAGMFAARLWWLMRWVGHADVAVLDGGLPAWEAARLPVDSVVPDELQLSTAPGNLSR KPSLVPLMTAGLVLKRLGQPALPIIDARAPDRYRGENETLDPVGGHIPGARNRFFRDNLQADGTFKPAAQLRSDFEAVLA GARPEDAVLQCGSGVTASHNLLAMEVAGLPGAALYAGSWSEWVSDPSRPVATGPNP
Sequences:
>Translated_296_residues MSERAPRYATLITAPQLAALQQSAPRSTIVFDCSFDLANPAAGREAYRASHIPGAFYLHLDNELSGPKTGTNGRHPLPDA DAFVARMRALGVNDDTQVVACDRQAGMFAARLWWLMRWVGHADVAVLDGGLPAWEAARLPVDSVVPDELQLSTAPGNLSR KPSLVPLMTAGLVLKRLGQPALPIIDARAPDRYRGENETLDPVGGHIPGARNRFFRDNLQADGTFKPAAQLRSDFEAVLA GARPEDAVLQCGSGVTASHNLLAMEVAGLPGAALYAGSWSEWVSDPSRPVATGPNP >Mature_295_residues SERAPRYATLITAPQLAALQQSAPRSTIVFDCSFDLANPAAGREAYRASHIPGAFYLHLDNELSGPKTGTNGRHPLPDAD AFVARMRALGVNDDTQVVACDRQAGMFAARLWWLMRWVGHADVAVLDGGLPAWEAARLPVDSVVPDELQLSTAPGNLSRK PSLVPLMTAGLVLKRLGQPALPIIDARAPDRYRGENETLDPVGGHIPGARNRFFRDNLQADGTFKPAAQLRSDFEAVLAG ARPEDAVLQCGSGVTASHNLLAMEVAGLPGAALYAGSWSEWVSDPSRPVATGPNP
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI194473668, Length=291, Percent_Identity=33.3333333333333, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI61835204, Length=291, Percent_Identity=33.3333333333333, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI194473681, Length=291, Percent_Identity=33.3333333333333, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI17402865, Length=258, Percent_Identity=32.9457364341085, Blast_Score=112, Evalue=4e-25, Organism=Escherichia coli, GI87082121, Length=253, Percent_Identity=31.2252964426877, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87081967, Length=303, Percent_Identity=27.7227722772277, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71997283, Length=277, Percent_Identity=31.4079422382672, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17561888, Length=253, Percent_Identity=27.6679841897233, Blast_Score=71, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6324825, Length=253, Percent_Identity=26.0869565217391, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 31571; Mature: 31440
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00380 RHODANESE_1 ; PS00683 RHODANESE_2 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERAPRYATLITAPQLAALQQSAPRSTIVFDCSFDLANPAAGREAYRASHIPGAFYLHL CCCCCCCEEEEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEE DNELSGPKTGTNGRHPLPDADAFVARMRALGVNDDTQVVACDRQAGMFAARLWWLMRWVG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHC HADVAVLDGGLPAWEAARLPVDSVVPDELQLSTAPGNLSRKPSLVPLMTAGLVLKRLGQP CCCEEEEECCCCCHHHHCCCHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC ALPIIDARAPDRYRGENETLDPVGGHIPGARNRFFRDNLQADGTFKPAAQLRSDFEAVLA CCCEEECCCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHC GARPEDAVLQCGSGVTASHNLLAMEVAGLPGAALYAGSWSEWVSDPSRPVATGPNP CCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCEEECCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SERAPRYATLITAPQLAALQQSAPRSTIVFDCSFDLANPAAGREAYRASHIPGAFYLHL CCCCCCEEEEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEE DNELSGPKTGTNGRHPLPDADAFVARMRALGVNDDTQVVACDRQAGMFAARLWWLMRWVG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHC HADVAVLDGGLPAWEAARLPVDSVVPDELQLSTAPGNLSRKPSLVPLMTAGLVLKRLGQP CCCEEEEECCCCCHHHHCCCHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC ALPIIDARAPDRYRGENETLDPVGGHIPGARNRFFRDNLQADGTFKPAAQLRSDFEAVLA CCCEEECCCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHC GARPEDAVLQCGSGVTASHNLLAMEVAGLPGAALYAGSWSEWVSDPSRPVATGPNP CCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCEEECCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]