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The map label for this gene is ybeB [H]

Identifier: 17546913

GI number: 17546913

Start: 2376478

End: 2377089

Strand: Direct

Name: ybeB [H]

Synonym: RSc2194

Alternate gene names: 17546913

Gene position: 2376478-2377089 (Clockwise)

Preceding gene: 17546912

Following gene: 17546914

Centisome position: 63.95

GC content: 67.48

Gene sequence:

>612_bases
ATGGATATTCGCAAACTACAACGCGTGATCGTCGACGCGCTCGAAGACGTCAAGGCGCAGGACATCAAGGTCTTCAACAC
GACCCACCTGACCGAGCTGTTCGACCGCACGGTCATCGCCAGCGGCACCTCCAACCGCCAGACCAAGGCGCTGGCCGCCT
CGGTGCGTGACGCCGTCAAGGAAGCCGGCGGCCACGTGATCGCCGTGGAAGGCGAAGACGTGGGCGAGTGGGTGCTGGTC
GACTGCGGCGACGCCGTGGTCCACATCATGCAGCCGCAACTGCGCCAGTACTACAACCTGGAAGAGATCTGGGGCGACAA
GCCGGTGCGCATCCAGCTCGGCGGCACCAGCGGCCGCGGCCTGCCCAAGGCCAGCGAAGGCTACGACGACGAGGAAGACG
AGGCCGAAGAAGTCACGCCGGCCAAGCGCCGCACCACCAAGCCGAAACTGGCCGGCGAGCGCCCGACCAAAGCGGCCGCC
CCCGCCAAGACCGCCGCCAAGAAGACGACCAGCCGCCCGGCCACCAAGCGGGCTTCCGGCACGAGCAAGCCCGCCACGAA
GACCGCCGCAAAAACGGCTGCAAAGCGCGCCCCGGCCAAGCGCGCATCGTAA

Upstream 100 bases:

>100_bases
TCCAGTCGCATGCGCTGTACCGCCGTGCCGATGGCACGGTCAGTGCTTGATCCGATTTTTGACCGCCTTTTTCCCGCCCC
CAACGTTCTTCTTACTCAGT

Downstream 100 bases:

>100_bases
TCCCGCGCGGGCAGCCTCGCCATGCAGTTGCTGATCGTCGCAGTCGGGCACAAGATGCCGCGCTGGATCGAAGACGGCTT
CGCCGAATACGCCAAGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MDIRKLQRVIVDALEDVKAQDIKVFNTTHLTELFDRTVIASGTSNRQTKALAASVRDAVKEAGGHVIAVEGEDVGEWVLV
DCGDAVVHIMQPQLRQYYNLEEIWGDKPVRIQLGGTSGRGLPKASEGYDDEEDEAEEVTPAKRRTTKPKLAGERPTKAAA
PAKTAAKKTTSRPATKRASGTSKPATKTAAKTAAKRAPAKRAS

Sequences:

>Translated_203_residues
MDIRKLQRVIVDALEDVKAQDIKVFNTTHLTELFDRTVIASGTSNRQTKALAASVRDAVKEAGGHVIAVEGEDVGEWVLV
DCGDAVVHIMQPQLRQYYNLEEIWGDKPVRIQLGGTSGRGLPKASEGYDDEEDEAEEVTPAKRRTTKPKLAGERPTKAAA
PAKTAAKKTTSRPATKRASGTSKPATKTAAKTAAKRAPAKRAS
>Mature_203_residues
MDIRKLQRVIVDALEDVKAQDIKVFNTTHLTELFDRTVIASGTSNRQTKALAASVRDAVKEAGGHVIAVEGEDVGEWVLV
DCGDAVVHIMQPQLRQYYNLEEIWGDKPVRIQLGGTSGRGLPKASEGYDDEEDEAEEVTPAKRRTTKPKLAGERPTKAAA
PAKTAAKKTTSRPATKRASGTSKPATKTAAKTAAKRAPAKRAS

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=101, Percent_Identity=35.6435643564356, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 21873; Mature: 21873

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRKLQRVIVDALEDVKAQDIKVFNTTHLTELFDRTVIASGTSNRQTKALAASVRDAVK
CCHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHH
EAGGHVIAVEGEDVGEWVLVDCGDAVVHIMQPQLRQYYNLEEIWGDKPVRIQLGGTSGRG
HCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCCCCC
LPKASEGYDDEEDEAEEVTPAKRRTTKPKLAGERPTKAAAPAKTAAKKTTSRPATKRASG
CCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHCCCC
TSKPATKTAAKTAAKRAPAKRAS
CCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDIRKLQRVIVDALEDVKAQDIKVFNTTHLTELFDRTVIASGTSNRQTKALAASVRDAVK
CCHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHH
EAGGHVIAVEGEDVGEWVLVDCGDAVVHIMQPQLRQYYNLEEIWGDKPVRIQLGGTSGRG
HCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCCCCC
LPKASEGYDDEEDEAEEVTPAKRRTTKPKLAGERPTKAAAPAKTAAKKTTSRPATKRASG
CCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHCCCC
TSKPATKTAAKTAAKRAPAKRAS
CCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]