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The map label for this gene is ycjP [C]

Identifier: 17546861

GI number: 17546861

Start: 2324646

End: 2325506

Strand: Reverse

Name: ycjP [C]

Synonym: RSc2142

Alternate gene names: 17546861

Gene position: 2325506-2324646 (Counterclockwise)

Preceding gene: 17546862

Following gene: 17546860

Centisome position: 62.57

GC content: 65.04

Gene sequence:

>861_bases
ATGAGCGATGGGATGCTCGATATGCGCCGTGCGGGCGGCCCGCCGAACGTGTTTGGCGCGGTGCGGCGCGCGCTGCCGGG
CGTGCTCGCCTGGTTGATCGCGCTGGCGCTGTTTTTCCCGATCTTCTGGATGGCGATCACCGCGTTCAAGACCGAGCAGC
AGGCCTACGAGGCATCGCTGTTCTTCGTGCCGACGCTCGACAGCTTCCGGGAGGTGTTCGCGCGCAGCAACTACTTCGCG
TTCGCCTGGAATTCGGTGCTGATCTCGGCCGGCGTAACGGTCATCTGCCTCGCGCTCGCGGTGCCCGCCGCGTATGCGAT
GGCCTTCTTCCCGAACCGCCGCACGCAGAAGGTGCTGCTGTGGATGCTGTCGACGAAGATGATGCCGTCGGTCGGCGTGC
TCGTGCCGATCTATCTGCTGTGGAAGAACGCCGGGCTGCTCGATACGGTCTCCGGGCTCGTCATTGTCTATGCGCTGATC
AACCTGCCGATCGCGGTGTGGATGGCGTTCACCTACTTCAACGAGATCCCGAAGGACATCCTCGAGTCGGGGCGGATCGA
CGGCGCATCGACGTGGCAGGAGATCGTCTACCTGCTGATGCCGATGGCGCTGCCGGGCCTGGCGTCGACCGCGCTCCTGC
TCGTCATCCTGTCGTGGAACGAGGCGTTCTGGAGCATCAACCTGTCGAGCTCGAATGCGGCGCCGCTGACCGTGTTCATC
GCGTCGTACTCGAGTCCGGAGGGGCTGTTCTGGGCGAAGCTGTCGGCCGCGTCGCTGCTGGCGGTGGCGCCGATCCTGGT
GGTCGGCTGGCTGTCGCAGAAGCAGCTGGTTCGCGGGCTCACGTTCGGAGCGGTCAAATGA

Upstream 100 bases:

>100_bases
TCGCCTCGGCGGGCGGGATCCTGGCTGTCGTGGTCGCGAACATCGTGTCGTTCTTCCTGGTGCGGATGCTCGCGAAGAAC
CTGAAAGGGGAGTACCAGCA

Downstream 100 bases:

>100_bases
GCGAGCGCATCCGAGAAGAGGGCATCCTGATCTGCGACTGCGACGGCGTGCTGATCGACAGCGAGGCGATCGCGGCCGAC
GTGCTCGTGCGTGAGCTCGA

Product: transmembrane ABC transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSDGMLDMRRAGGPPNVFGAVRRALPGVLAWLIALALFFPIFWMAITAFKTEQQAYEASLFFVPTLDSFREVFARSNYFA
FAWNSVLISAGVTVICLALAVPAAYAMAFFPNRRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYALI
NLPIAVWMAFTYFNEIPKDILESGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFI
ASYSSPEGLFWAKLSAASLLAVAPILVVGWLSQKQLVRGLTFGAVK

Sequences:

>Translated_286_residues
MSDGMLDMRRAGGPPNVFGAVRRALPGVLAWLIALALFFPIFWMAITAFKTEQQAYEASLFFVPTLDSFREVFARSNYFA
FAWNSVLISAGVTVICLALAVPAAYAMAFFPNRRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYALI
NLPIAVWMAFTYFNEIPKDILESGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFI
ASYSSPEGLFWAKLSAASLLAVAPILVVGWLSQKQLVRGLTFGAVK
>Mature_285_residues
SDGMLDMRRAGGPPNVFGAVRRALPGVLAWLIALALFFPIFWMAITAFKTEQQAYEASLFFVPTLDSFREVFARSNYFAF
AWNSVLISAGVTVICLALAVPAAYAMAFFPNRRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYALIN
LPIAVWMAFTYFNEIPKDILESGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFIA
SYSSPEGLFWAKLSAASLLAVAPILVVGWLSQKQLVRGLTFGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=282, Percent_Identity=30.4964539007092, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1790464, Length=213, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31361; Mature: 31229

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDGMLDMRRAGGPPNVFGAVRRALPGVLAWLIALALFFPIFWMAITAFKTEQQAYEASL
CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
FFVPTLDSFREVFARSNYFAFAWNSVLISAGVTVICLALAVPAAYAMAFFPNRRTQKVLL
EEEECHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
WMLSTKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYALINLPIAVWMAFTYFNEIPKDI
HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LESGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFI
HHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEE
ASYSSPEGLFWAKLSAASLLAVAPILVVGWLSQKQLVRGLTFGAVK
EECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDGMLDMRRAGGPPNVFGAVRRALPGVLAWLIALALFFPIFWMAITAFKTEQQAYEASL
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
FFVPTLDSFREVFARSNYFAFAWNSVLISAGVTVICLALAVPAAYAMAFFPNRRTQKVLL
EEEECHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
WMLSTKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYALINLPIAVWMAFTYFNEIPKDI
HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LESGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFI
HHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEE
ASYSSPEGLFWAKLSAASLLAVAPILVVGWLSQKQLVRGLTFGAVK
EECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]