| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is yieH [H]
Identifier: 17546860
GI number: 17546860
Start: 2323951
End: 2324649
Strand: Reverse
Name: yieH [H]
Synonym: RSc2141
Alternate gene names: 17546860
Gene position: 2324649-2323951 (Counterclockwise)
Preceding gene: 17546861
Following gene: 17546859
Centisome position: 62.55
GC content: 72.25
Gene sequence:
>699_bases ATGAGCGAGCGCATCCGAGAAGAGGGCATCCTGATCTGCGACTGCGACGGCGTGCTGATCGACAGCGAGGCGATCGCGGC CGACGTGCTCGTGCGTGAGCTCGAGGCGCGCTGGCCGGGTGCGGACACGCGATCCGCCGTGTTGCCGCTGCTCGGATTGC AGATCCCGCGCGTGCTGTCCGGCACATGCGACGCGCTGGGCCGCACGCTGTCGGAAGCCGACGCGGCGGCGATCGAGCGC GCGGTCCTCGCCGAAGCGGTCAACGCGCCGGCCGTCGACGGGATCGATTCGGCGCTCGCCGAGGTGCCGCTGACGATCGC GTGCGCGAGCAACAGCCGCCGGGTGTATGTCGAAGCGGTGCTGAGCCGCACCGGGCTCAAGCGCTTCTTCGGCGAGCGGC TGTTCTGCGCGGACAGCGTCGCGCGCCCGAAGCCCTCGCCGGACGTCTATCTGGCGGCGGCGCACACGCTCGGGGTGACG CCGCTCCAATGCCTCGTCGTCGAGGACAGCATCGCCGGCATCACCGCGGCGGCGGCGGCGGGCATGACGGTGCTCGGCTT CACGGGCGCGGGCCACGCGACGCCCGCGCAGACCGATGCGCTGCGCGGCATCGGCGCGCGCCACGTATTCGACGACATGC GCGAGCTGCCCGGCTATGTCGCGCGCTGGCGCACGACGGGCGCTGTGCTGCCGAATTGA
Upstream 100 bases:
>100_bases AGCTGTCGGCCGCGTCGCTGCTGGCGGTGGCGCCGATCCTGGTGGTCGGCTGGCTGTCGCAGAAGCAGCTGGTTCGCGGG CTCACGTTCGGAGCGGTCAA
Downstream 100 bases:
>100_bases ATCCGGCGCCGCGCGACAGCGGCGCACGATACCCATCAATGGAGACCCATCATGGCAAGCGTGCTTCTGCGCAATATCGC GAAACGCTACGACAACAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSERIREEGILICDCDGVLIDSEAIAADVLVRELEARWPGADTRSAVLPLLGLQIPRVLSGTCDALGRTLSEADAAAIER AVLAEAVNAPAVDGIDSALAEVPLTIACASNSRRVYVEAVLSRTGLKRFFGERLFCADSVARPKPSPDVYLAAAHTLGVT PLQCLVVEDSIAGITAAAAAGMTVLGFTGAGHATPAQTDALRGIGARHVFDDMRELPGYVARWRTTGAVLPN
Sequences:
>Translated_232_residues MSERIREEGILICDCDGVLIDSEAIAADVLVRELEARWPGADTRSAVLPLLGLQIPRVLSGTCDALGRTLSEADAAAIER AVLAEAVNAPAVDGIDSALAEVPLTIACASNSRRVYVEAVLSRTGLKRFFGERLFCADSVARPKPSPDVYLAAAHTLGVT PLQCLVVEDSIAGITAAAAAGMTVLGFTGAGHATPAQTDALRGIGARHVFDDMRELPGYVARWRTTGAVLPN >Mature_231_residues SERIREEGILICDCDGVLIDSEAIAADVLVRELEARWPGADTRSAVLPLLGLQIPRVLSGTCDALGRTLSEADAAAIERA VLAEAVNAPAVDGIDSALAEVPLTIACASNSRRVYVEAVLSRTGLKRFFGERLFCADSVARPKPSPDVYLAAAHTLGVTP LQCLVVEDSIAGITAAAAAGMTVLGFTGAGHATPAQTDALRGIGARHVFDDMRELPGYVARWRTTGAVLPN
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=187, Percent_Identity=25.1336898395722, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1789046, Length=182, Percent_Identity=32.4175824175824, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24275; Mature: 24144
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERIREEGILICDCDGVLIDSEAIAADVLVRELEARWPGADTRSAVLPLLGLQIPRVLS CCCCHHHCCEEEECCCCEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH GTCDALGRTLSEADAAAIERAVLAEAVNAPAVDGIDSALAEVPLTIACASNSRRVYVEAV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCCCEEHHHHH LSRTGLKRFFGERLFCADSVARPKPSPDVYLAAAHTLGVTPLQCLVVEDSIAGITAAAAA HHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEEHHCCCCCEEEEEECCCHHHHHHHHHC GMTVLGFTGAGHATPAQTDALRGIGARHVFDDMRELPGYVARWRTTGAVLPN CCEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SERIREEGILICDCDGVLIDSEAIAADVLVRELEARWPGADTRSAVLPLLGLQIPRVLS CCCHHHCCEEEECCCCEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH GTCDALGRTLSEADAAAIERAVLAEAVNAPAVDGIDSALAEVPLTIACASNSRRVYVEAV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCCCEEHHHHH LSRTGLKRFFGERLFCADSVARPKPSPDVYLAAAHTLGVTPLQCLVVEDSIAGITAAAAA HHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEEHHCCCCCEEEEEECCCHHHHHHHHHC GMTVLGFTGAGHATPAQTDALRGIGARHVFDDMRELPGYVARWRTTGAVLPN CCEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]