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The map label for this gene is 17546843

Identifier: 17546843

GI number: 17546843

Start: 2301639

End: 2302280

Strand: Reverse

Name: 17546843

Synonym: RSc2124

Alternate gene names: NA

Gene position: 2302280-2301639 (Counterclockwise)

Preceding gene: 17546846

Following gene: 17546842

Centisome position: 61.95

GC content: 71.03

Gene sequence:

>642_bases
ATGTGGAACGGAATCAAGATGCCCGTGCGCTGGGCACTGGCGGGCGCGTTGGCCGCCGCCGGTCTGCTGGCCGGCTGCGC
CAGCACCGTGACCAGCCAGGTGACGGCGTTCAGGCAGCCCGGCTGGACCGACAACCCGCCGCGCACCTTCGCCTTCGAGC
GTACCGCGGCGCAGCAGAACGACCTGGAGCGCCAGACCTACGAGGCCTGGACCGCCGACCAACTGGCCGCGCGCGGGTTT
GCCGCTGCGCCGCACGGCAGCGCCCGCTACCTCGTCCGGCTCGACTATTCGGCCGCCACGCGCCTGATGCAGGTGCGCCA
GCCGGTCTATCCCGACCCGTACTGGGGCCCGGGCCCGTGGGGACCGTGGCACGGACCGTGGGGGGCCTGGGGCCCGTGGG
GTCCGCAGTATGTCGATACCACCGTGCAAGTGCCGTTCTATGCCTATCACGCGGAGATCGACGAGGCGGCGACGGGCAAG
CGCGTCTACCAGGTGACCGCGCAGACGCAAGGCGGCGACGGCTCGCTGGCGGGCGTGATGCCCTACCTGGTCCGCAGCGC
CTTCGCCAATTTCCCGGCGCCGAACGCGCAGCCGATCCTGGTGGAGTTGCCGCTCGACGCCAAGGTCAAGCCGGTCAAAT
GA

Upstream 100 bases:

>100_bases
GGGAATCTTCCCGGCGCGGGTGACTCTGAGTAAACAGGCGGCGCGCCCGGCCCAGCGGCCGGCAGGTGCGCCGCTCCGAT
CATGTTGTGGGGGAACATCC

Downstream 100 bases:

>100_bases
GTCGCGGGTGGGCCGGGCGGCCGGTCTACGTTAGAATGCCTGACCTAATTTGCGGGCCGACCAGCCGTACCCTCGCTTGA
GCGCTGTGATCCCATTCCAC

Product: lipoprotein transmembrane

Products: NA

Alternate protein names: Lipoprotein Transmembrane; Lipoprotein

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MWNGIKMPVRWALAGALAAAGLLAGCASTVTSQVTAFRQPGWTDNPPRTFAFERTAAQQNDLERQTYEAWTADQLAARGF
AAAPHGSARYLVRLDYSAATRLMQVRQPVYPDPYWGPGPWGPWHGPWGAWGPWGPQYVDTTVQVPFYAYHAEIDEAATGK
RVYQVTAQTQGGDGSLAGVMPYLVRSAFANFPAPNAQPILVELPLDAKVKPVK

Sequences:

>Translated_213_residues
MWNGIKMPVRWALAGALAAAGLLAGCASTVTSQVTAFRQPGWTDNPPRTFAFERTAAQQNDLERQTYEAWTADQLAARGF
AAAPHGSARYLVRLDYSAATRLMQVRQPVYPDPYWGPGPWGPWHGPWGAWGPWGPQYVDTTVQVPFYAYHAEIDEAATGK
RVYQVTAQTQGGDGSLAGVMPYLVRSAFANFPAPNAQPILVELPLDAKVKPVK
>Mature_213_residues
MWNGIKMPVRWALAGALAAAGLLAGCASTVTSQVTAFRQPGWTDNPPRTFAFERTAAQQNDLERQTYEAWTADQLAARGF
AAAPHGSARYLVRLDYSAATRLMQVRQPVYPDPYWGPGPWGPWHGPWGAWGPWGPQYVDTTVQVPFYAYHAEIDEAATGK
RVYQVTAQTQGGDGSLAGVMPYLVRSAFANFPAPNAQPILVELPLDAKVKPVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23259; Mature: 23259

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWNGIKMPVRWALAGALAAAGLLAGCASTVTSQVTAFRQPGWTDNPPRTFAFERTAAQQN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHH
DLERQTYEAWTADQLAARGFAAAPHGSARYLVRLDYSAATRLMQVRQPVYPDPYWGPGPW
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCC
GPWHGPWGAWGPWGPQYVDTTVQVPFYAYHAEIDEAATGKRVYQVTAQTQGGDGSLAGVM
CCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHH
PYLVRSAFANFPAPNAQPILVELPLDAKVKPVK
HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MWNGIKMPVRWALAGALAAAGLLAGCASTVTSQVTAFRQPGWTDNPPRTFAFERTAAQQN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHH
DLERQTYEAWTADQLAARGFAAAPHGSARYLVRLDYSAATRLMQVRQPVYPDPYWGPGPW
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCC
GPWHGPWGAWGPWGPQYVDTTVQVPFYAYHAEIDEAATGKRVYQVTAQTQGGDGSLAGVM
CCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHH
PYLVRSAFANFPAPNAQPILVELPLDAKVKPVK
HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA