| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is maeB1 [H]
Identifier: 17546842
GI number: 17546842
Start: 2299025
End: 2301346
Strand: Reverse
Name: maeB1 [H]
Synonym: RSc2123
Alternate gene names: 17546842
Gene position: 2301346-2299025 (Counterclockwise)
Preceding gene: 17546843
Following gene: 17546835
Centisome position: 61.92
GC content: 67.79
Gene sequence:
>2322_bases ATGAACGACAAGCTTCACGACGCCTCGCCCGATACACTCGACAAGGGGGCCGAGGCCGAACTGCGCCGCGCCGCGCTCGA ATACCACCGCTCGCCGACGCGCGGCAAGATCGAGGTCCGCTCGACCAAGACGCTGATCAACCAGCGCGACCTGTCGCTGG CGTATTCGCCGGGCGTGGCCTATGCGTGTACCGAGATCGAGCGCGACCCGTCGCTGGCGGCCGAGTACACCTCGCGCGCC AACCTGGTCGGCGTGATCACCAACGGCACCGCGGTGCTCGGCCTGGGCGACATCGGCCCGCTGGCCGGCAAGCCGGTGAT GGAAGGCAAGGGCTGCCTGTTCAAGAAGTTCGCCGGCGTGGACGTGTTCGACATCGAGCTGGCCGAGCGCGATCCGGACA AGCTGGTCGACATCATCGCCTCGCTGGAGCCGACGCTGGGCGGCATCAACCTCGAGGACATCAAGGCGCCGGAGTGCTTC TACATCGAGCAGAAGCTGCGCGAGCGCCTGAACATTCCCGTCTTCCACGATGACCAGCACGGCACGGCGATCATCTCGTC GGCCGCGCTGCTCAACGGCATGAAGGTGGTCGGCAAGCAGATCGGCGAGGTCAAGGTGGCGGTGTCGGGCGCGGGCGCCG CGGCCATCGCCTGCCTGGACCTGATGGTGAGCCTGGGCGTCAAGCGCGAGAACGTGTTCGTGGTCGACTCCAAGGGCGTC ATCTATGCCGGCCGCGACGCCAAGATGGAGCCGAACAAGGCGCGCTACGCGCAGGACACCGCGGCCCGCACGCTGGCCGA CATCGTGCGCGATGCGGACGTGTTCCTGGGCTGCTCGGCCGCCGGCGTGCTGACCGCCGACATGGTCAAGACCATGGCGC CCAATCCGATCATCCTGGCGCTGGCCAACCCCGAGCCGGAGATCCGTCCCGAGATCGCCAAGGCCGCGCGTCCGGACTGC ATCATCGCCACGGGCCGTTCGGACTACCCGAACCAGGTCAACAACGTGCTGTGCTTCCCGTACATCTTCCGCGGCGCGCT CGATTGCGGCGCCACCAAGATCACGGAAGCAATGAAGCTGGCCTGCGTGAAGGCCATCGCCGAGCTGGCCGAAGCCGAGA CCAACGACGCCGTGGCCCAGGCCTATGCCGGCCAGGAGCTGAACTTCGGTCCGGACTACATCATCCCGAAGCCGTTCGAT TCGCGCCTGATCGAGAAGATCGCGCCGGCGGTGGCCAAGGCAGCGATGGAGTCCGGCGTGGCGACGCGCCCGATCGCCGA CCTGGACGCCTACCGCCACCAGCTCAACGACTTCGTCTACCACACCGGCATGACCATGCGCCCGGTGTTCTCCGCCGCCA AGGCCGCGCCCAAGCGCGTGGTCTACGCCGAGGGCGAAGAGGAGCGCGTGCTGCGCGCGGTGCAGACGGTGATCGACGAG GGCCTGGCCAAGCCGATCCTGGTCGGCCGCCCGCACGTGATCGAGATGCGCATCCAGAAGGCCGGCCTGCGCCTGAAGCC GGGCGTGGATTTCGAGCTGGTGAACCCGGAAGACGATCCGCGCTACCACCAGTACCACACCGCCTACCACGAGCTGATGG GCCGCAACGGCGTGACGCCCGACATGGCGAAGTCGGCGCTGCGCCGCTCCAACACGCTGATCGGCGCGCTGCTGGTGCGC CTGGGCGATGCCGACGCGATGCTGTGCGGCACGGTGGGCCGCTTCGACGCGCATCTCGAGCACGTGCGCGACGTGATCGG CCTGGCGCCCAACGCCAAGGTGTTCGCCGCCATGAACGGCCTGATGCTGGAAAAGCACACGCTGTTCATCGCCGACACCT TCGTCAACGAAGACCCGACGGCTGAAGAGCTGGCCGCGATCACCGAGCTGGCCGCGGAAGAAGTGCGCCGCTTCGGCCTG GAGCCGAAGGTGGCGATGCTGTCGCACTCGATGTTCGGTTCGTCCAAGAGCAAGTCGGCGCGCAAGATGCGCGCGGCGTA CGACCTGCTCAAGACGCAGGCGCCGAGCCTGCAGGTGGAAGGCGAGATCCAGGGCGATGCCGCGCTGGTCGAAGACATCC GCCACCACTTCCTGCCCAAGAGCGCGTTTGCCGGCAGCGCCAACCTGCTGGTGATGCCGACGCTGGACGCGGCCAACATC GCCTTCAACCTGCTCAAGATCACGGGCGGGCACGGCGTGACGGTGGGCCCGATCCTGCTGGGCGCGGCCAAGCCGGTGCA CATCCTCAACCCGGCGGCCACGTCGCGGCGCATCGTCAACATGACCGCGCTGGCGGTGGCGGACGTGTCGGCGACACGCT GA
Upstream 100 bases:
>100_bases TTTTTCCGTTTTTTTTGCTTCTCCTCCGTACCAGGACGCCTTCGCCTGAAGCGCTCACCAGCGCTTGATCCGCGGAACGT CCCTCCAGGATGTCATTGAT
Downstream 100 bases:
>100_bases TCGGCGGATCGCCCCGCATGGCCGCTGCGTTGCGCGGCGGCCAGGAAAAACGAAACGGCGCCTGAAGCGATTCGGGCGCC GTTTTCTTTTGCCGTGGATC
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 773; Mature: 773
Protein sequence:
>773_residues MNDKLHDASPDTLDKGAEAELRRAALEYHRSPTRGKIEVRSTKTLINQRDLSLAYSPGVAYACTEIERDPSLAAEYTSRA NLVGVITNGTAVLGLGDIGPLAGKPVMEGKGCLFKKFAGVDVFDIELAERDPDKLVDIIASLEPTLGGINLEDIKAPECF YIEQKLRERLNIPVFHDDQHGTAIISSAALLNGMKVVGKQIGEVKVAVSGAGAAAIACLDLMVSLGVKRENVFVVDSKGV IYAGRDAKMEPNKARYAQDTAARTLADIVRDADVFLGCSAAGVLTADMVKTMAPNPIILALANPEPEIRPEIAKAARPDC IIATGRSDYPNQVNNVLCFPYIFRGALDCGATKITEAMKLACVKAIAELAEAETNDAVAQAYAGQELNFGPDYIIPKPFD SRLIEKIAPAVAKAAMESGVATRPIADLDAYRHQLNDFVYHTGMTMRPVFSAAKAAPKRVVYAEGEEERVLRAVQTVIDE GLAKPILVGRPHVIEMRIQKAGLRLKPGVDFELVNPEDDPRYHQYHTAYHELMGRNGVTPDMAKSALRRSNTLIGALLVR LGDADAMLCGTVGRFDAHLEHVRDVIGLAPNAKVFAAMNGLMLEKHTLFIADTFVNEDPTAEELAAITELAAEEVRRFGL EPKVAMLSHSMFGSSKSKSARKMRAAYDLLKTQAPSLQVEGEIQGDAALVEDIRHHFLPKSAFAGSANLLVMPTLDAANI AFNLLKITGGHGVTVGPILLGAAKPVHILNPAATSRRIVNMTALAVADVSATR
Sequences:
>Translated_773_residues MNDKLHDASPDTLDKGAEAELRRAALEYHRSPTRGKIEVRSTKTLINQRDLSLAYSPGVAYACTEIERDPSLAAEYTSRA NLVGVITNGTAVLGLGDIGPLAGKPVMEGKGCLFKKFAGVDVFDIELAERDPDKLVDIIASLEPTLGGINLEDIKAPECF YIEQKLRERLNIPVFHDDQHGTAIISSAALLNGMKVVGKQIGEVKVAVSGAGAAAIACLDLMVSLGVKRENVFVVDSKGV IYAGRDAKMEPNKARYAQDTAARTLADIVRDADVFLGCSAAGVLTADMVKTMAPNPIILALANPEPEIRPEIAKAARPDC IIATGRSDYPNQVNNVLCFPYIFRGALDCGATKITEAMKLACVKAIAELAEAETNDAVAQAYAGQELNFGPDYIIPKPFD SRLIEKIAPAVAKAAMESGVATRPIADLDAYRHQLNDFVYHTGMTMRPVFSAAKAAPKRVVYAEGEEERVLRAVQTVIDE GLAKPILVGRPHVIEMRIQKAGLRLKPGVDFELVNPEDDPRYHQYHTAYHELMGRNGVTPDMAKSALRRSNTLIGALLVR LGDADAMLCGTVGRFDAHLEHVRDVIGLAPNAKVFAAMNGLMLEKHTLFIADTFVNEDPTAEELAAITELAAEEVRRFGL EPKVAMLSHSMFGSSKSKSARKMRAAYDLLKTQAPSLQVEGEIQGDAALVEDIRHHFLPKSAFAGSANLLVMPTLDAANI AFNLLKITGGHGVTVGPILLGAAKPVHILNPAATSRRIVNMTALAVADVSATR >Mature_773_residues MNDKLHDASPDTLDKGAEAELRRAALEYHRSPTRGKIEVRSTKTLINQRDLSLAYSPGVAYACTEIERDPSLAAEYTSRA NLVGVITNGTAVLGLGDIGPLAGKPVMEGKGCLFKKFAGVDVFDIELAERDPDKLVDIIASLEPTLGGINLEDIKAPECF YIEQKLRERLNIPVFHDDQHGTAIISSAALLNGMKVVGKQIGEVKVAVSGAGAAAIACLDLMVSLGVKRENVFVVDSKGV IYAGRDAKMEPNKARYAQDTAARTLADIVRDADVFLGCSAAGVLTADMVKTMAPNPIILALANPEPEIRPEIAKAARPDC IIATGRSDYPNQVNNVLCFPYIFRGALDCGATKITEAMKLACVKAIAELAEAETNDAVAQAYAGQELNFGPDYIIPKPFD SRLIEKIAPAVAKAAMESGVATRPIADLDAYRHQLNDFVYHTGMTMRPVFSAAKAAPKRVVYAEGEEERVLRAVQTVIDE GLAKPILVGRPHVIEMRIQKAGLRLKPGVDFELVNPEDDPRYHQYHTAYHELMGRNGVTPDMAKSALRRSNTLIGALLVR LGDADAMLCGTVGRFDAHLEHVRDVIGLAPNAKVFAAMNGLMLEKHTLFIADTFVNEDPTAEELAAITELAAEEVRRFGL EPKVAMLSHSMFGSSKSKSARKMRAAYDLLKTQAPSLQVEGEIQGDAALVEDIRHHFLPKSAFAGSANLLVMPTLDAANI AFNLLKITGGHGVTVGPILLGAAKPVHILNPAATSRRIVNMTALAVADVSATR
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505145, Length=410, Percent_Identity=25.609756097561, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI4505143, Length=397, Percent_Identity=24.9370277078086, Blast_Score=90, Evalue=8e-18, Organism=Homo sapiens, GI270265879, Length=369, Percent_Identity=26.0162601626016, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI62420882, Length=345, Percent_Identity=27.2463768115942, Blast_Score=84, Evalue=5e-16, Organism=Homo sapiens, GI62420880, Length=345, Percent_Identity=27.2463768115942, Blast_Score=84, Evalue=5e-16, Organism=Homo sapiens, GI239049447, Length=345, Percent_Identity=27.2463768115942, Blast_Score=84, Evalue=5e-16, Organism=Escherichia coli, GI1788806, Length=750, Percent_Identity=63.8666666666667, Blast_Score=989, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=335, Percent_Identity=29.5522388059701, Blast_Score=142, Evalue=7e-35, Organism=Escherichia coli, GI1788800, Length=315, Percent_Identity=32.0634920634921, Blast_Score=138, Evalue=2e-33, Organism=Escherichia coli, GI87081919, Length=475, Percent_Identity=23.3684210526316, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17537199, Length=410, Percent_Identity=24.390243902439, Blast_Score=75, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322823, Length=275, Percent_Identity=29.0909090909091, Blast_Score=98, Evalue=4e-21, Organism=Drosophila melanogaster, GI21356279, Length=505, Percent_Identity=27.5247524752475, Blast_Score=99, Evalue=2e-20, Organism=Drosophila melanogaster, GI281362672, Length=482, Percent_Identity=27.5933609958506, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI281362674, Length=482, Percent_Identity=27.5933609958506, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI24646388, Length=345, Percent_Identity=29.2753623188406, Blast_Score=90, Evalue=5e-18, Organism=Drosophila melanogaster, GI24646386, Length=345, Percent_Identity=29.2753623188406, Blast_Score=90, Evalue=7e-18, Organism=Drosophila melanogaster, GI78707242, Length=434, Percent_Identity=24.6543778801843, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI78707238, Length=434, Percent_Identity=24.6543778801843, Blast_Score=75, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 83126; Mature: 83126
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDKLHDASPDTLDKGAEAELRRAALEYHRSPTRGKIEVRSTKTLINQRDLSLAYSPGVA CCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCEEEECCCCE YACTEIERDPSLAAEYTSRANLVGVITNGTAVLGLGDIGPLAGKPVMEGKGCLFKKFAGV EEECCCCCCCCHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCC DVFDIELAERDPDKLVDIIASLEPTLGGINLEDIKAPECFYIEQKLRERLNIPVFHDDQH EEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCC GTAIISSAALLNGMKVVGKQIGEVKVAVSGAGAAAIACLDLMVSLGVKRENVFVVDSKGV CHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCE IYAGRDAKMEPNKARYAQDTAARTLADIVRDADVFLGCSAAGVLTADMVKTMAPNPIILA EEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHCCCCCEEEE LANPEPEIRPEIAKAARPDCIIATGRSDYPNQVNNVLCFPYIFRGALDCGATKITEAMKL ECCCCCCCCHHHHHCCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHCCHHHHHHHHHH ACVKAIAELAEAETNDAVAQAYAGQELNFGPDYIIPKPFDSRLIEKIAPAVAKAAMESGV HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC ATRPIADLDAYRHQLNDFVYHTGMTMRPVFSAAKAAPKRVVYAEGEEERVLRAVQTVIDE CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH GLAKPILVGRPHVIEMRIQKAGLRLKPGVDFELVNPEDDPRYHQYHTAYHELMGRNGVTP HCCCCEEECCCCEEEEEEHHCCCEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCH DMAKSALRRSNTLIGALLVRLGDADAMLCGTVGRFDAHLEHVRDVIGLAPNAKVFAAMNG HHHHHHHHHCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEEHHHCC LMLEKHTLFIADTFVNEDPTAEELAAITELAAEEVRRFGLEPKVAMLSHSMFGSSKSKSA EEEECEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH RKMRAAYDLLKTQAPSLQVEGEIQGDAALVEDIRHHFLPKSAFAGSANLLVMPTLDAANI HHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCHHCCCCCCEEEEECCCHHHH AFNLLKITGGHGVTVGPILLGAAKPVHILNPAATSRRIVNMTALAVADVSATR EEEEEEEECCCCCEEHHHHHCCCCCEEEECCCHHCCHHHHHHHHHEECCCCCC >Mature Secondary Structure MNDKLHDASPDTLDKGAEAELRRAALEYHRSPTRGKIEVRSTKTLINQRDLSLAYSPGVA CCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCEEEECCCCE YACTEIERDPSLAAEYTSRANLVGVITNGTAVLGLGDIGPLAGKPVMEGKGCLFKKFAGV EEECCCCCCCCHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCC DVFDIELAERDPDKLVDIIASLEPTLGGINLEDIKAPECFYIEQKLRERLNIPVFHDDQH EEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCC GTAIISSAALLNGMKVVGKQIGEVKVAVSGAGAAAIACLDLMVSLGVKRENVFVVDSKGV CHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCE IYAGRDAKMEPNKARYAQDTAARTLADIVRDADVFLGCSAAGVLTADMVKTMAPNPIILA EEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHCCCCCEEEE LANPEPEIRPEIAKAARPDCIIATGRSDYPNQVNNVLCFPYIFRGALDCGATKITEAMKL ECCCCCCCCHHHHHCCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHCCHHHHHHHHHH ACVKAIAELAEAETNDAVAQAYAGQELNFGPDYIIPKPFDSRLIEKIAPAVAKAAMESGV HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC ATRPIADLDAYRHQLNDFVYHTGMTMRPVFSAAKAAPKRVVYAEGEEERVLRAVQTVIDE CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH GLAKPILVGRPHVIEMRIQKAGLRLKPGVDFELVNPEDDPRYHQYHTAYHELMGRNGVTP HCCCCEEECCCCEEEEEEHHCCCEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCH DMAKSALRRSNTLIGALLVRLGDADAMLCGTVGRFDAHLEHVRDVIGLAPNAKVFAAMNG HHHHHHHHHCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEEHHHCC LMLEKHTLFIADTFVNEDPTAEELAAITELAAEEVRRFGLEPKVAMLSHSMFGSSKSKSA EEEECEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH RKMRAAYDLLKTQAPSLQVEGEIQGDAALVEDIRHHFLPKSAFAGSANLLVMPTLDAANI HHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCHHCCCCCCEEEEECCCHHHH AFNLLKITGGHGVTVGPILLGAAKPVHILNPAATSRRIVNMTALAVADVSATR EEEEEEEECCCCCEEHHHHHCCCCCEEEECCCHHCCHHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]