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The map label for this gene is accD [H]

Identifier: 17546699

GI number: 17546699

Start: 2154794

End: 2155666

Strand: Reverse

Name: accD [H]

Synonym: RSc1980

Alternate gene names: 17546699

Gene position: 2155666-2154794 (Counterclockwise)

Preceding gene: 17546700

Following gene: 17546698

Centisome position: 58.0

GC content: 66.32

Gene sequence:

>873_bases
ATGAGCTGGCTGGACAAACTGCTTCCGCCCAAGATCCAACAGACCGATCCGTCGCAACGCAAGGGCATTCCGGAAGGCCT
GTGGATCAAATGCCCCGCCTGCGAGTCGGTGCTGTACCGTACCGACGTCGAAGCCAACCTGCACGTCTGCCCCAAGTGCG
AACACCACATGCGCATCGGCGCCCGCGCGCGCCTGGATGCGCTGCTGGACGCCGAGGGCCGCTATGAGCTGGGCCAGGAG
ATCCTCCCGGTCGACGCGCTCAAGTTCAAGGACACCAAGAAGTATCCCGACCGCATCAAGACGGCCATGGACGACACCGG
CGAGACCGACGCCATGGTCGTGATGGGCGGCGCCATCCACGCGCTGCCGGTGGTGGTGGCCTGCTTCGAGTTCGAATTCA
TGGGCGGCTCGATGGGCTCGGTGGTGGGCGAGCGCTTCACGCGCGGCGCGCAGACGGCGCTGGAGCAGAAGGTGCCGTTC
ATCTGCGTGTCAGCCACGGGCGGCGCGCGCATGCAGGAAAGCCTGCTGTCGCTGATGCAGATGGCCAAGACCACGGCCAT
GGTCAACAAGCTGGCCGAAGCCAAGCTGCCGTTCATCAGCGTGCTGACCGATCCGACCATGGGCGGCGTTTCCGCCAGCT
TCGCCTTCATGGGCGACGTGGTGATCGCCGAGCCGCGCGCGCTGATCGGCTTCGCCGGCCCGCGCGTGATCGAGCAGACC
GTGCGCGAAAAGCTGCCGGAAGGCTTCCAGCGCGCCGAATTCCTGCTGCAGAAGGGGGCCATCGACATGATCATCGACCG
CCGCAGCATGCGCCGCGAAATCGCCGAGCTGCTTGCCCTGCTGCAGAAGCAGCCGGCCGACGCGCTGGCCTGA

Upstream 100 bases:

>100_bases
GAACAAGCGGTACAATGTCTGACTGATTTCATCGCGGACATCCGCCAGGCGCTCGACGCCTGAGCCACATGACCCGCGCG
AGCGCATTCAAGGAGTACGC

Downstream 100 bases:

>100_bases
TGTCCCGCACCCTGTGAACTGAAGCGCGGGCGAGAGTCCGCGCTTCTTCTTTTTGCGCGATCCGATCGCACACCGCACCG
CATGCATTGTTTCGATAACC

Product: acetyl-CoA carboxylase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSWLDKLLPPKIQQTDPSQRKGIPEGLWIKCPACESVLYRTDVEANLHVCPKCEHHMRIGARARLDALLDAEGRYELGQE
ILPVDALKFKDTKKYPDRIKTAMDDTGETDAMVVMGGAIHALPVVVACFEFEFMGGSMGSVVGERFTRGAQTALEQKVPF
ICVSATGGARMQESLLSLMQMAKTTAMVNKLAEAKLPFISVLTDPTMGGVSASFAFMGDVVIAEPRALIGFAGPRVIEQT
VREKLPEGFQRAEFLLQKGAIDMIIDRRSMRREIAELLALLQKQPADALA

Sequences:

>Translated_290_residues
MSWLDKLLPPKIQQTDPSQRKGIPEGLWIKCPACESVLYRTDVEANLHVCPKCEHHMRIGARARLDALLDAEGRYELGQE
ILPVDALKFKDTKKYPDRIKTAMDDTGETDAMVVMGGAIHALPVVVACFEFEFMGGSMGSVVGERFTRGAQTALEQKVPF
ICVSATGGARMQESLLSLMQMAKTTAMVNKLAEAKLPFISVLTDPTMGGVSASFAFMGDVVIAEPRALIGFAGPRVIEQT
VREKLPEGFQRAEFLLQKGAIDMIIDRRSMRREIAELLALLQKQPADALA
>Mature_289_residues
SWLDKLLPPKIQQTDPSQRKGIPEGLWIKCPACESVLYRTDVEANLHVCPKCEHHMRIGARARLDALLDAEGRYELGQEI
LPVDALKFKDTKKYPDRIKTAMDDTGETDAMVVMGGAIHALPVVVACFEFEFMGGSMGSVVGERFTRGAQTALEQKVPFI
CVSATGGARMQESLLSLMQMAKTTAMVNKLAEAKLPFISVLTDPTMGGVSASFAFMGDVVIAEPRALIGFAGPRVIEQTV
REKLPEGFQRAEFLLQKGAIDMIIDRRSMRREIAELLALLQKQPADALA

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=286, Percent_Identity=61.5384615384615, Blast_Score=369, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 31838; Mature: 31706

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLDKLLPPKIQQTDPSQRKGIPEGLWIKCPACESVLYRTDVEANLHVCPKCEHHMRIG
CCHHHHHCCCCCCCCCCHHHCCCCCCCEEECCHHHHHHHHCCCCCCCEECCCCHHHHHCC
ARARLDALLDAEGRYELGQEILPVDALKFKDTKKYPDRIKTAMDDTGETDAMVVMGGAIH
HHHHHHHHHCCCCCHHHCCHHCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCHHH
ALPVVVACFEFEFMGGSMGSVVGERFTRGAQTALEQKVPFICVSATGGARMQESLLSLMQ
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH
MAKTTAMVNKLAEAKLPFISVLTDPTMGGVSASFAFMGDVVIAEPRALIGFAGPRVIEQT
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCEECCCHHHCCCCHHHHHHH
VREKLPEGFQRAEFLLQKGAIDMIIDRRSMRREIAELLALLQKQPADALA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SWLDKLLPPKIQQTDPSQRKGIPEGLWIKCPACESVLYRTDVEANLHVCPKCEHHMRIG
CHHHHHCCCCCCCCCCHHHCCCCCCCEEECCHHHHHHHHCCCCCCCEECCCCHHHHHCC
ARARLDALLDAEGRYELGQEILPVDALKFKDTKKYPDRIKTAMDDTGETDAMVVMGGAIH
HHHHHHHHHCCCCCHHHCCHHCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCHHH
ALPVVVACFEFEFMGGSMGSVVGERFTRGAQTALEQKVPFICVSATGGARMQESLLSLMQ
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH
MAKTTAMVNKLAEAKLPFISVLTDPTMGGVSASFAFMGDVVIAEPRALIGFAGPRVIEQT
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCEECCCHHHCCCCHHHHHHH
VREKLPEGFQRAEFLLQKGAIDMIIDRRSMRREIAELLALLQKQPADALA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA