| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546665
Identifier: 17546665
GI number: 17546665
Start: 2122215
End: 2122484
Strand: Direct
Name: 17546665
Synonym: RSc1946
Alternate gene names: NA
Gene position: 2122215-2122484 (Clockwise)
Preceding gene: 17546660
Following gene: 17546669
Centisome position: 57.1
GC content: 57.04
Gene sequence:
>270_bases ATGGGTACCTTGTTCGAACAACCACGGCGCCAATTCCTAGACGTCTCAACGGACAACATCGATGATTTTCTGTCGGTCGC CAATCATCTGGCCAAGAAGCACAAGCTCTCTGTGGCCGACGTGATTGCAGCTAGGGCTGTACTGGAAACGGCCCGTGCGA GCGACCTTGCCGTGCGCAACGGTGATGTGTTTGATGAGCAGATGGCGGGCTTGGGCCGGCTTTTGGAGGAACTCACCAGC GCGATCGAGTCACTGAAGGTGGCGGGCTAA
Upstream 100 bases:
>100_bases TTGCCGGCCACGCGATTTCATCCAGCACGCGCTGTCGCTCGCAATCCGTTTTGGCCCGCAGTAGGATGGACGTTTTAATG TCGAGGCAAAGGGGGGAGTG
Downstream 100 bases:
>100_bases TCCGCCACGCGCGAGCAGTGAAGGAGTGGTCAGCGGGTGCACTGCACGTGTACTTCGCGTGGACTTTCAGCGACAACCAA AGACCACCACAGACAGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MGTLFEQPRRQFLDVSTDNIDDFLSVANHLAKKHKLSVADVIAARAVLETARASDLAVRNGDVFDEQMAGLGRLLEELTS AIESLKVAG
Sequences:
>Translated_89_residues MGTLFEQPRRQFLDVSTDNIDDFLSVANHLAKKHKLSVADVIAARAVLETARASDLAVRNGDVFDEQMAGLGRLLEELTS AIESLKVAG >Mature_88_residues GTLFEQPRRQFLDVSTDNIDDFLSVANHLAKKHKLSVADVIAARAVLETARASDLAVRNGDVFDEQMAGLGRLLEELTSA IESLKVAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9668; Mature: 9537
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTLFEQPRRQFLDVSTDNIDDFLSVANHLAKKHKLSVADVIAARAVLETARASDLAVRN CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GDVFDEQMAGLGRLLEELTSAIESLKVAG CCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GTLFEQPRRQFLDVSTDNIDDFLSVANHLAKKHKLSVADVIAARAVLETARASDLAVRN CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GDVFDEQMAGLGRLLEELTSAIESLKVAG CCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA