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The map label for this gene is 17546660

Identifier: 17546660

GI number: 17546660

Start: 2114488

End: 2115573

Strand: Direct

Name: 17546660

Synonym: RSc1941

Alternate gene names: NA

Gene position: 2114488-2115573 (Clockwise)

Preceding gene: 17546659

Following gene: 17546665

Centisome position: 56.9

GC content: 65.19

Gene sequence:

>1086_bases
ATGAGCCGCAACAAGACCCGCCGCGCCGCGCGCACGGCATCCGCCCACGTGCGCACCGCCAACACCGACGCACCGACCGA
GCGCCACACCGACCGGGCCGCGCAGGCCGAGGTGTTCTCTTTCGGCGATCCGGTCGAAGTGTTGGACCGGCGCGAGCTGC
TGGATTACGTCGAGTGCATGCGCATGGGCCAGTGGTATGAACCGCCGCTGCCGTGGGACGGCCTGGCGCGCTCGTTCCGC
GCCGCCGCACACCACAGCTCGGCCATCTACGTGAAGCGCAATATCCTGGTCAGCACGTTCATCCCGCACCGCCTACTCTC
GCGCGCGACGTTCGAGCGCCTGGTGCTCGACTGGCAGGTATTCGGCAATGCCTACCTGGAGCGCCGCGACAACGTGCTCG
GCCGCCCGATGCGGCTGGATACGCCCCTGGCCAAGTACGTGCGGCGCGGGCTCGACCTGAACACCTATTTTTTCGTGCAG
AACTGGCAGCAGCCATACACCTTCGCCGCCGGCTCCATGTTCCACCTCCAGGAACCGGACATCAATCAAGAGGTGTACGG
CCTGCCGGAATACCTGTCCGCGCTGAACGCCACATGGTTGAACGAATCGGCCACGCTGTTCCGCCGCCGGTACTACAAAA
ATGGCTCCCACGCCGGCTTCATCCTCTACATGACCGACGCGGCGCAGAGGCAAGAGGATGTCGACACGCTGCGCGAGGCG
ATGAAGAGTGCCAAGGGGCCGGGCAATTTCCGCAACCTGTTCATGTACGCGCCTAACGGCAAGAAGGACGGGATCCAGCT
GCTACCGGTGTCCGAGGTGGCCGCGAAGGACGAGTTCTGGAACATCAAAAACGTCACGCGCGACGACCAGCTCGCCGCGC
ACCGCGTGCCGCCGCAGCTCATGGGCATCATCCCGAACAACACCGGCGGATTCGGCGACGTGGAGAAGGCCGCCCTGGTG
TTCGCGCGCAACGAGGTGAAGCCATTGCAGGACCGCCTGTTGGCGGTCAATGACTGGATCGGGGAGGAGGTGGTGCGGTT
CGCGCCATATGCACTGGGTGCAGCCGGCCAAGCGGATGCGCCATAG

Upstream 100 bases:

>100_bases
ACACCAGCCACGCTGACCTGGCGTGGGCCTGCATGCATGCGCTTTCGCACGAACCGCTCGAAGGCGTCACCACCACCAAT
ACCAGCATCCTGGAGCTGTC

Downstream 100 bases:

>100_bases
CCGGCCCGAGCTTCCCACCATGGTCGATGGAGTCGCCCAGACGGCTGATTCAGCGCATATCGGGTTTCAGGAAGAGGCTG
GTTGAGCGGCACCCGCTTGC

Product: bacteriophage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MSRNKTRRAARTASAHVRTANTDAPTERHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPLPWDGLARSFR
AAAHHSSAIYVKRNILVSTFIPHRLLSRATFERLVLDWQVFGNAYLERRDNVLGRPMRLDTPLAKYVRRGLDLNTYFFVQ
NWQQPYTFAAGSMFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQRQEDVDTLREA
MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAALV
FARNEVKPLQDRLLAVNDWIGEEVVRFAPYALGAAGQADAP

Sequences:

>Translated_361_residues
MSRNKTRRAARTASAHVRTANTDAPTERHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPLPWDGLARSFR
AAAHHSSAIYVKRNILVSTFIPHRLLSRATFERLVLDWQVFGNAYLERRDNVLGRPMRLDTPLAKYVRRGLDLNTYFFVQ
NWQQPYTFAAGSMFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQRQEDVDTLREA
MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAALV
FARNEVKPLQDRLLAVNDWIGEEVVRFAPYALGAAGQADAP
>Mature_360_residues
SRNKTRRAARTASAHVRTANTDAPTERHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPLPWDGLARSFRA
AAHHSSAIYVKRNILVSTFIPHRLLSRATFERLVLDWQVFGNAYLERRDNVLGRPMRLDTPLAKYVRRGLDLNTYFFVQN
WQQPYTFAAGSMFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQRQEDVDTLREAM
KSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAALVF
ARNEVKPLQDRLLAVNDWIGEEVVRFAPYALGAAGQADAP

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 41069; Mature: 40938

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNKTRRAARTASAHVRTANTDAPTERHTDRAAQAEVFSFGDPVEVLDRRELLDYVECM
CCCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RMGQWYEPPLPWDGLARSFRAAAHHSSAIYVKRNILVSTFIPHRLLSRATFERLVLDWQV
HCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
FGNAYLERRDNVLGRPMRLDTPLAKYVRRGLDLNTYFFVQNWQQPYTFAAGSMFHLQEPD
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEECCCEEEECCCC
INQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQRQEDVDTLREA
CCCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHH
MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQL
HHHCCCCCCCCEEEEECCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHH
MGIIPNNTGGFGDVEKAALVFARNEVKPLQDRLLAVNDWIGEEVVRFAPYALGAAGQADA
EEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC
P
C
>Mature Secondary Structure 
SRNKTRRAARTASAHVRTANTDAPTERHTDRAAQAEVFSFGDPVEVLDRRELLDYVECM
CCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RMGQWYEPPLPWDGLARSFRAAAHHSSAIYVKRNILVSTFIPHRLLSRATFERLVLDWQV
HCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
FGNAYLERRDNVLGRPMRLDTPLAKYVRRGLDLNTYFFVQNWQQPYTFAAGSMFHLQEPD
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEECCCEEEECCCC
INQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQRQEDVDTLREA
CCCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHH
MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQL
HHHCCCCCCCCEEEEECCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHH
MGIIPNNTGGFGDVEKAALVFARNEVKPLQDRLLAVNDWIGEEVVRFAPYALGAAGQADA
EEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]