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The map label for this gene is trg [H]

Identifier: 17546613

GI number: 17546613

Start: 2080692

End: 2082299

Strand: Reverse

Name: trg [H]

Synonym: RSc1894

Alternate gene names: 17546613

Gene position: 2082299-2080692 (Counterclockwise)

Preceding gene: 17546614

Following gene: 17546612

Centisome position: 56.03

GC content: 67.29

Gene sequence:

>1608_bases
TTGAATTTTTTTGAGATTCAGGGAAATCATCAAGGGGAAGTTATGGGTTTGCATCGCTTGACCGTTAAAACCAAGTTGCT
CGCCAGTTTCGGTTTGCTGGCGGCGATCGTCGTGGCGCTTTCTGGTTTCGCCATTCTCGCGCTGGACGGCGCCAATGCGC
GTTTCATCGGATTTGTCGACGGCGTGAATGCCCGTGTGATGCTGGTCAACAGGATCCGGGCTGCGGTTGACCGGCGCGCC
CTCGCGGCGCGCAACCTGGTGCTGGCGACCACAGCGCAGGAGCGGGCGTTTGAAAAGGCGGAAGCCGAGCGGGCCCATGA
GGAAGTCCACGCGGGTCTGGCCGAGCTGGAAACCAGGCTGGCCGCGCCGGGCGTCACGGACAAGGCGAGACAACTGGGCG
CGGAGATCCGGCGGATCGAGAACGCCTATGGCCCGGTCGCGCTGGACATCGTCAAGCTGGCGGCGGAGGGGCAGCGCGAG
GCGGCCAACCAGAAGATCAATGCCGAGTGCAAGCCGTTGCTCGATACGTTGGTCAAGGCCGTGAAGGTCTATGCGGGCTA
CGGTGCCGAGCTGTCCCAGCGGACCCTGCAGGAGGCGGAGGTGCGCGCGGCCTGGCTGCGCAGCATCGTGATCGGCGCGA
GCGTGGCTGCCGTCATGCTGGCGGTCGGGCTGGGGCTGGTGATCACGCGCAGCCTGCTGAAGGCACTGGGCACGGAGCCC
GCGGTGCTCAACGAGATCACGCGGAAGATCTCGGCGGGGGACCTGGCGCCGATTCCCCTTGCGCAAGCCGCGCCGAAGGG
CAGCGTGTTCGAATCGATGGCGGCCATGCAGCAGAGCCTGGCGGGGATCGTCGGTGCGGTGCGCGGCGCCGCCAATGCCA
TCTCGGTCGGCTCGGCGCAGATCGCGGCCGGCAATGTGGATCTGTCTTCGCGCACGGAAGAGCAGGCGTCCTCGCTGCAG
CAGACCGTTTCGACCATGGAGCAGCTGACCGCGACGGTGCGGCAGAACGCCGACAACGCGCGGCAGGCGAACACCCTGTC
CATCGATGCCTCGGCCGTGGCCCAGAAGGGTAGCGCGGAGGTGGGCCAGGTCGTGGCAACGATGGGGGACATCAGCCGGG
AGTCCGTCAAGATCGGCGAGATCACCGGGATCATCGAGAGCATTGCGTTCCAGACCAATATCCTGGCCCTGAACGCGGCG
GTCGAGGCGGCGCGCGCGGGCGAGCAGGGCCGCGGGTTCGCGGTGGTGGCCAGCGAGGTGCGCACGCTGGCGCAGCGCTC
GTCCAGCGCGGCCAAGGACATCAAGGAGCTGATCGGTGCGTCGCTGGAGAAGATCACGACCGGCTCGGGCGCGGCCGAGC
AGGCGGGCCGCACCATGCAGGCGGTCACGCTGGCGGTCGAAAAGGTCACGGCGATCATCCACGAGATCACCCAGGCTTCC
GAGGAGCAGACCAGCGGCATCGAGCAGATCAGCCATGCGATGGGCCAGATGGACCAGGTGACGCAGCACAACGCGGCGCT
GGTGGAGCAGGCGGCGGCGGCCTCCCAGTCCCTGGAGCAGCAGGGCCGGGAGCTGGACCACGCGGTGGCGTCGTTCCGGC
TCGCCTGA

Upstream 100 bases:

>100_bases
GTCAACTAATACGAAAGACCTATGTAGAAAAAATCGAATTGACCGACTTTCCCGCTTGTGCGGTGCGGCGGATATTCTGC
ATGCCACGCTGTTTTTTTAT

Downstream 100 bases:

>100_bases
GCCGGTCCGGCGCCGGCTTCCGGGGTGGCGGGTCGCGCACAGCCGCGCGGCGGCATGCGGGGTTTCACCGGTCGCGCTGA
AACACTTGGGGCCATGCTAC

Product: methyl-accepting chemotaxis transducer transmembrane protein

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MNFFEIQGNHQGEVMGLHRLTVKTKLLASFGLLAAIVVALSGFAILALDGANARFIGFVDGVNARVMLVNRIRAAVDRRA
LAARNLVLATTAQERAFEKAEAERAHEEVHAGLAELETRLAAPGVTDKARQLGAEIRRIENAYGPVALDIVKLAAEGQRE
AANQKINAECKPLLDTLVKAVKVYAGYGAELSQRTLQEAEVRAAWLRSIVIGASVAAVMLAVGLGLVITRSLLKALGTEP
AVLNEITRKISAGDLAPIPLAQAAPKGSVFESMAAMQQSLAGIVGAVRGAANAISVGSAQIAAGNVDLSSRTEEQASSLQ
QTVSTMEQLTATVRQNADNARQANTLSIDASAVAQKGSAEVGQVVATMGDISRESVKIGEITGIIESIAFQTNILALNAA
VEAARAGEQGRGFAVVASEVRTLAQRSSSAAKDIKELIGASLEKITTGSGAAEQAGRTMQAVTLAVEKVTAIIHEITQAS
EEQTSGIEQISHAMGQMDQVTQHNAALVEQAAAASQSLEQQGRELDHAVASFRLA

Sequences:

>Translated_535_residues
MNFFEIQGNHQGEVMGLHRLTVKTKLLASFGLLAAIVVALSGFAILALDGANARFIGFVDGVNARVMLVNRIRAAVDRRA
LAARNLVLATTAQERAFEKAEAERAHEEVHAGLAELETRLAAPGVTDKARQLGAEIRRIENAYGPVALDIVKLAAEGQRE
AANQKINAECKPLLDTLVKAVKVYAGYGAELSQRTLQEAEVRAAWLRSIVIGASVAAVMLAVGLGLVITRSLLKALGTEP
AVLNEITRKISAGDLAPIPLAQAAPKGSVFESMAAMQQSLAGIVGAVRGAANAISVGSAQIAAGNVDLSSRTEEQASSLQ
QTVSTMEQLTATVRQNADNARQANTLSIDASAVAQKGSAEVGQVVATMGDISRESVKIGEITGIIESIAFQTNILALNAA
VEAARAGEQGRGFAVVASEVRTLAQRSSSAAKDIKELIGASLEKITTGSGAAEQAGRTMQAVTLAVEKVTAIIHEITQAS
EEQTSGIEQISHAMGQMDQVTQHNAALVEQAAAASQSLEQQGRELDHAVASFRLA
>Mature_535_residues
MNFFEIQGNHQGEVMGLHRLTVKTKLLASFGLLAAIVVALSGFAILALDGANARFIGFVDGVNARVMLVNRIRAAVDRRA
LAARNLVLATTAQERAFEKAEAERAHEEVHAGLAELETRLAAPGVTDKARQLGAEIRRIENAYGPVALDIVKLAAEGQRE
AANQKINAECKPLLDTLVKAVKVYAGYGAELSQRTLQEAEVRAAWLRSIVIGASVAAVMLAVGLGLVITRSLLKALGTEP
AVLNEITRKISAGDLAPIPLAQAAPKGSVFESMAAMQQSLAGIVGAVRGAANAISVGSAQIAAGNVDLSSRTEEQASSLQ
QTVSTMEQLTATVRQNADNARQANTLSIDASAVAQKGSAEVGQVVATMGDISRESVKIGEITGIIESIAFQTNILALNAA
VEAARAGEQGRGFAVVASEVRTLAQRSSSAAKDIKELIGASLEKITTGSGAAEQAGRTMQAVTLAVEKVTAIIHEITQAS
EEQTSGIEQISHAMGQMDQVTQHNAALVEQAAAASQSLEQQGRELDHAVASFRLA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=420, Percent_Identity=45.7142857142857, Blast_Score=285, Evalue=6e-78,
Organism=Escherichia coli, GI2367378, Length=404, Percent_Identity=46.2871287128713, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI1788194, Length=345, Percent_Identity=49.2753623188406, Blast_Score=267, Evalue=1e-72,
Organism=Escherichia coli, GI1788195, Length=289, Percent_Identity=54.6712802768166, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1789453, Length=247, Percent_Identity=44.5344129554656, Blast_Score=199, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 55893; Mature: 55893

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFEIQGNHQGEVMGLHRLTVKTKLLASFGLLAAIVVALSGFAILALDGANARFIGFVD
CCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEC
GVNARVMLVNRIRAAVDRRALAARNLVLATTAQERAFEKAEAERAHEEVHAGLAELETRL
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAPGVTDKARQLGAEIRRIENAYGPVALDIVKLAAEGQREAANQKINAECKPLLDTLVKA
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHH
VKVYAGYGAELSQRTLQEAEVRAAWLRSIVIGASVAAVMLAVGLGLVITRSLLKALGTEP
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AVLNEITRKISAGDLAPIPLAQAAPKGSVFESMAAMQQSLAGIVGAVRGAANAISVGSAQ
HHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCE
IAAGNVDLSSRTEEQASSLQQTVSTMEQLTATVRQNADNARQANTLSIDASAVAQKGSAE
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEECHHHHHCCCCHH
VGQVVATMGDISRESVKIGEITGIIESIAFQTNILALNAAVEAARAGEQGRGFAVVASEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RTLAQRSSSAAKDIKELIGASLEKITTGSGAAEQAGRTMQAVTLAVEKVTAIIHEITQAS
HHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
EEQTSGIEQISHAMGQMDQVTQHNAALVEQAAAASQSLEQQGRELDHAVASFRLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFFEIQGNHQGEVMGLHRLTVKTKLLASFGLLAAIVVALSGFAILALDGANARFIGFVD
CCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEC
GVNARVMLVNRIRAAVDRRALAARNLVLATTAQERAFEKAEAERAHEEVHAGLAELETRL
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAPGVTDKARQLGAEIRRIENAYGPVALDIVKLAAEGQREAANQKINAECKPLLDTLVKA
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHH
VKVYAGYGAELSQRTLQEAEVRAAWLRSIVIGASVAAVMLAVGLGLVITRSLLKALGTEP
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AVLNEITRKISAGDLAPIPLAQAAPKGSVFESMAAMQQSLAGIVGAVRGAANAISVGSAQ
HHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCE
IAAGNVDLSSRTEEQASSLQQTVSTMEQLTATVRQNADNARQANTLSIDASAVAQKGSAE
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEECHHHHHCCCCHH
VGQVVATMGDISRESVKIGEITGIIESIAFQTNILALNAAVEAARAGEQGRGFAVVASEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RTLAQRSSSAAKDIKELIGASLEKITTGSGAAEQAGRTMQAVTLAVEKVTAIIHEITQAS
HHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
EEQTSGIEQISHAMGQMDQVTQHNAALVEQAAAASQSLEQQGRELDHAVASFRLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]