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The map label for this gene is sdiA [C]

Identifier: 17546614

GI number: 17546614

Start: 2083050

End: 2083808

Strand: Reverse

Name: sdiA [C]

Synonym: RSc1895

Alternate gene names: 17546614

Gene position: 2083808-2083050 (Counterclockwise)

Preceding gene: 17546616

Following gene: 17546613

Centisome position: 56.07

GC content: 59.42

Gene sequence:

>759_bases
ATGCAAATTAATGTCATTGAGCACTGCCTCGCGGCGGCGGAGGCCGTTCAGAACATCGATGAATTCAAGGCGTGGGTCCG
CAATCACGTCGGCGCCATCCTGAAAAACCAGTGCATGGTCTGCAGTCATGGCCGGATCACCTCTGCCGGCGTCCTGATGG
ACCATATCGTCACGGTCGATTTTCCGATCGAGTATCTGGCGGCCATCCAGAATGTGGCCGGTGGAATCGATACGCCTCTG
ATGCGGCGCTGGTTCGCCACGCGCAGCCCGGTATATTTCGATGCCGCCGCGCCAACGGCCGAAACCGATCGGGTGTGGCT
GGCCAAATTCATCATGCACGACCTGAGAAACGCCGTCGCCGACGGTATTTATGACGAAGGTCATTGCATCGGAACCTATT
TCAGTTTTCATCGGCTGCCTTCGATCAACGCGCCTTTCCTGACGTCAGTCTTGCGCGACCTGACACCCGTGCTGCATCGC
ACGCTGATGCGGGCTGTCGCCGATACCGAGAAGACCTGGCACAACGCGTTGCGGGTGATGTCGCTGCTGAGCGAAAGGGA
GCGGCAGGTGGCGGCATGGATCGGCAAGGGAAAGAGCAACGCCGAGATTGCGCTGCTGGCCTCCATTTCGGAGAACACCG
TAAAGCAGCACCTGAAACACATCATGGACAAGACCGGCTGTGCGAATCGGGTGGGCGTGGCGGTGCTGGCCACCTGGTAT
GCCGTATCCCCGCTGGGGCAGGGGATGAAGGTGCTGTAG

Upstream 100 bases:

>100_bases
GGAGAAGAGGGGGGTGGGCGTCTTTTGTGGATAATCGACAGGTCTCGGTGTGGGGTGCCTCGGATAAAATGAGGGACAGG
GACGGGAATCCATAAGAAAA

Downstream 100 bases:

>100_bases
GCGTGCATTGGCGAAAAGCCGGGGCCCGGCCAACTGGTTTACCGTATCCGTCGTCGCCTTTGGTCGAGGTGATTTGATTT
CTCTGGTGTTATCAGGCGCG

Product: transcription regulator protein

Products: NA

Alternate protein names: Transcription Regulator Protein LuxR Family; Transcription Regulator Protein

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MQINVIEHCLAAAEAVQNIDEFKAWVRNHVGAILKNQCMVCSHGRITSAGVLMDHIVTVDFPIEYLAAIQNVAGGIDTPL
MRRWFATRSPVYFDAAAPTAETDRVWLAKFIMHDLRNAVADGIYDEGHCIGTYFSFHRLPSINAPFLTSVLRDLTPVLHR
TLMRAVADTEKTWHNALRVMSLLSERERQVAAWIGKGKSNAEIALLASISENTVKQHLKHIMDKTGCANRVGVAVLATWY
AVSPLGQGMKVL

Sequences:

>Translated_252_residues
MQINVIEHCLAAAEAVQNIDEFKAWVRNHVGAILKNQCMVCSHGRITSAGVLMDHIVTVDFPIEYLAAIQNVAGGIDTPL
MRRWFATRSPVYFDAAAPTAETDRVWLAKFIMHDLRNAVADGIYDEGHCIGTYFSFHRLPSINAPFLTSVLRDLTPVLHR
TLMRAVADTEKTWHNALRVMSLLSERERQVAAWIGKGKSNAEIALLASISENTVKQHLKHIMDKTGCANRVGVAVLATWY
AVSPLGQGMKVL
>Mature_252_residues
MQINVIEHCLAAAEAVQNIDEFKAWVRNHVGAILKNQCMVCSHGRITSAGVLMDHIVTVDFPIEYLAAIQNVAGGIDTPL
MRRWFATRSPVYFDAAAPTAETDRVWLAKFIMHDLRNAVADGIYDEGHCIGTYFSFHRLPSINAPFLTSVLRDLTPVLHR
TLMRAVADTEKTWHNALRVMSLLSERERQVAAWIGKGKSNAEIALLASISENTVKQHLKHIMDKTGCANRVGVAVLATWY
AVSPLGQGMKVL

Specific function: Activates Cell Division By Specifically Increasing Transcription From One Of The Two Promoters That Lie Immediately Upstream Of The Ftsqaz Gene Cluster. [C]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27946; Mature: 27946

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQINVIEHCLAAAEAVQNIDEFKAWVRNHVGAILKNQCMVCSHGRITSAGVLMDHIVTVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHC
FPIEYLAAIQNVAGGIDTPLMRRWFATRSPVYFDAAAPTAETDRVWLAKFIMHDLRNAVA
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
DGIYDEGHCIGTYFSFHRLPSINAPFLTSVLRDLTPVLHRTLMRAVADTEKTWHNALRVM
CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLSERERQVAAWIGKGKSNAEIALLASISENTVKQHLKHIMDKTGCANRVGVAVLATWY
HHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AVSPLGQGMKVL
HHHHHCCCCCCC
>Mature Secondary Structure
MQINVIEHCLAAAEAVQNIDEFKAWVRNHVGAILKNQCMVCSHGRITSAGVLMDHIVTVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHC
FPIEYLAAIQNVAGGIDTPLMRRWFATRSPVYFDAAAPTAETDRVWLAKFIMHDLRNAVA
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
DGIYDEGHCIGTYFSFHRLPSINAPFLTSVLRDLTPVLHRTLMRAVADTEKTWHNALRVM
CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLSERERQVAAWIGKGKSNAEIALLASISENTVKQHLKHIMDKTGCANRVGVAVLATWY
HHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AVSPLGQGMKVL
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA