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The map label for this gene is 17546544

Identifier: 17546544

GI number: 17546544

Start: 1993688

End: 1994827

Strand: Reverse

Name: 17546544

Synonym: RSc1825

Alternate gene names: NA

Gene position: 1994827-1993688 (Counterclockwise)

Preceding gene: 17546545

Following gene: 17546543

Centisome position: 53.68

GC content: 68.07

Gene sequence:

>1140_bases
ATGACAACAACCGCGTACGACGCCTATCGGGAAAGCATTGCCGGCCGTGCCGACGTGGCGGACACCCCGGAACTGCTGGC
CTACTACCAGCAGTTGGCGCGCCTGCAGGCCGGCGCACTGTGGACAGTGGCGAACAAGATCGAGCCCTGGCAGCCGAAGT
CGGATTCCGTGCCGGTCCTGTGGCGCTACCGGGATCTGCGCGACCACGTGCTGCGCTCGGTGGCCCTCGTCTCGCCCGAG
AAGGCGGGGCGTCGCGTCATCTACCTGAACAACCCCGGCCGTCAGGAGGTCAGCGCGGCGGTCGGCTGGCTGTACTCGGG
GCTGCAGGTGATGCACCCCGGCGAAGTCGCCACGGCGCACGCGCATTCCTCGTCGGCGCTGCGCTTCATCATGGAAGGGC
GCGGCGCGTACACCATCGTCGACGGCCACAAGATGACGCTCGACGCCAATGACTTCGTGCTCACGCCCAACGGCACGTGG
CACGAGCACGGCGTCGAGGCGGACGGCCTGCCGTGCATCTGGCAGGACGGCCTGGACATTCCCCTGGTCAACGCGCTGGA
GGCCGGCTTCTACGCCGTCCACCCCGATCTGCACCAGGCCGTCGGATACCCGGTCAACGACTCGACGGCGCTCTGGGGCG
CGCCCGGCCTGCGCCCGCACGACGCGCGCTGGAGCAAGCCCTATTCGCCGCTGTTCAAGTATGCGTGGGGGCCGACGTAC
GAAGCGCTGCAGCGCTACGCGTACACCGTCGAGGGCAGCCCCTTCGACGGCGCCCTGATGCACTACGCCAACCCGGTGAC
CGGCGGCCACGTCATGTCGACCATCGGCGCCAGCATGCAGTTGCTGCGGCCGGGCTTCGTCGGCAAGGCGCACCGCCACA
CCGGCAGCTTCCTCTACCAGGTCGCCAAGGGCAGCGGCTATTCGATCATCAACGGCCAGCGCTTCGACTGGCGCGAACGC
GACATCTTCTGCGTCCCGTCGTGGGCCTGGCACGAGCACGTCAACGGCAGCGCCAGCGAAGACGCCTGCCTGTTCTGCTT
CAGCGACCTGCCGGTGATGGAAAAGCTCGGCCTCTACCGGGAGGAAGCCCTGGCCGACAACGATGGACACCAGCCGCTGC
CTGGTCCCGCAGCGAAGTAA

Upstream 100 bases:

>100_bases
CGCCCGCCTACCGGTTCGGCAAGGAACCGCTCGAACGCAGCTTTGCCCGCGGCCGCGCGTGATGCCGGCATTCGCCTGAA
CCAGACCAAGGAGATCCACG

Downstream 100 bases:

>100_bases
GCCGGCGGCGGCTGGCCCGCGCCACATTGAACATTCCTTGGAGAAGACACCATGCGACTCGTAACCTTCCGCGCCCACGT
GAATGCGGCCGCCCGCCTCG

Product: dioxygenase oxidoreductase

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain-Containing Protein; 1 2-Dioxygenase; Gentisate 1 2-Dioxygenase Oxidoreductase Protein; Cupin 2 Protein; 1-Hydroxy-2-Naphthoate Dioxygenase; Gentisate 1 2-Dioxygenase Oxidoreductase; Dioxygenase Oxidoreductase Protein; Dioxygenase

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MTTTAYDAYRESIAGRADVADTPELLAYYQQLARLQAGALWTVANKIEPWQPKSDSVPVLWRYRDLRDHVLRSVALVSPE
KAGRRVIYLNNPGRQEVSAAVGWLYSGLQVMHPGEVATAHAHSSSALRFIMEGRGAYTIVDGHKMTLDANDFVLTPNGTW
HEHGVEADGLPCIWQDGLDIPLVNALEAGFYAVHPDLHQAVGYPVNDSTALWGAPGLRPHDARWSKPYSPLFKYAWGPTY
EALQRYAYTVEGSPFDGALMHYANPVTGGHVMSTIGASMQLLRPGFVGKAHRHTGSFLYQVAKGSGYSIINGQRFDWRER
DIFCVPSWAWHEHVNGSASEDACLFCFSDLPVMEKLGLYREEALADNDGHQPLPGPAAK

Sequences:

>Translated_379_residues
MTTTAYDAYRESIAGRADVADTPELLAYYQQLARLQAGALWTVANKIEPWQPKSDSVPVLWRYRDLRDHVLRSVALVSPE
KAGRRVIYLNNPGRQEVSAAVGWLYSGLQVMHPGEVATAHAHSSSALRFIMEGRGAYTIVDGHKMTLDANDFVLTPNGTW
HEHGVEADGLPCIWQDGLDIPLVNALEAGFYAVHPDLHQAVGYPVNDSTALWGAPGLRPHDARWSKPYSPLFKYAWGPTY
EALQRYAYTVEGSPFDGALMHYANPVTGGHVMSTIGASMQLLRPGFVGKAHRHTGSFLYQVAKGSGYSIINGQRFDWRER
DIFCVPSWAWHEHVNGSASEDACLFCFSDLPVMEKLGLYREEALADNDGHQPLPGPAAK
>Mature_378_residues
TTTAYDAYRESIAGRADVADTPELLAYYQQLARLQAGALWTVANKIEPWQPKSDSVPVLWRYRDLRDHVLRSVALVSPEK
AGRRVIYLNNPGRQEVSAAVGWLYSGLQVMHPGEVATAHAHSSSALRFIMEGRGAYTIVDGHKMTLDANDFVLTPNGTWH
EHGVEADGLPCIWQDGLDIPLVNALEAGFYAVHPDLHQAVGYPVNDSTALWGAPGLRPHDARWSKPYSPLFKYAWGPTYE
ALQRYAYTVEGSPFDGALMHYANPVTGGHVMSTIGASMQLLRPGFVGKAHRHTGSFLYQVAKGSGYSIINGQRFDWRERD
IFCVPSWAWHEHVNGSASEDACLFCFSDLPVMEKLGLYREEALADNDGHQPLPGPAAK

Specific function: Unknown

COG id: COG3435

COG function: function code Q; Gentisate 1,2-dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41918; Mature: 41786

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTAYDAYRESIAGRADVADTPELLAYYQQLARLQAGALWTVANKIEPWQPKSDSVPVL
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEE
WRYRDLRDHVLRSVALVSPEKAGRRVIYLNNPGRQEVSAAVGWLYSGLQVMHPGEVATAH
EEHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCHHHHHHHHHHHHHCCEEECCCCEEEEC
AHSSSALRFIMEGRGAYTIVDGHKMTLDANDFVLTPNGTWHEHGVEADGLPCIWQDGLDI
CCCHHHHHHEECCCCCEEEECCEEEEECCCCEEECCCCCCHHCCCCCCCCCEEECCCCCC
PLVNALEAGFYAVHPDLHQAVGYPVNDSTALWGAPGLRPHDARWSKPYSPLFKYAWGPTY
CHHHHHHCCEEEECCCHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCH
EALQRYAYTVEGSPFDGALMHYANPVTGGHVMSTIGASMQLLRPGFVGKAHRHTGSFLYQ
HHHHHHEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEE
VAKGSGYSIINGQRFDWRERDIFCVPSWAWHEHVNGSASEDACLFCFSDLPVMEKLGLYR
ECCCCCEEEECCCCCCCCCCCEEEECCCHHHHCCCCCCCCCEEEEEECCCCHHHHHCCHH
EEALADNDGHQPLPGPAAK
HHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTTAYDAYRESIAGRADVADTPELLAYYQQLARLQAGALWTVANKIEPWQPKSDSVPVL
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEE
WRYRDLRDHVLRSVALVSPEKAGRRVIYLNNPGRQEVSAAVGWLYSGLQVMHPGEVATAH
EEHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCHHHHHHHHHHHHHCCEEECCCCEEEEC
AHSSSALRFIMEGRGAYTIVDGHKMTLDANDFVLTPNGTWHEHGVEADGLPCIWQDGLDI
CCCHHHHHHEECCCCCEEEECCEEEEECCCCEEECCCCCCHHCCCCCCCCCEEECCCCCC
PLVNALEAGFYAVHPDLHQAVGYPVNDSTALWGAPGLRPHDARWSKPYSPLFKYAWGPTY
CHHHHHHCCEEEECCCHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCH
EALQRYAYTVEGSPFDGALMHYANPVTGGHVMSTIGASMQLLRPGFVGKAHRHTGSFLYQ
HHHHHHEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEE
VAKGSGYSIINGQRFDWRERDIFCVPSWAWHEHVNGSASEDACLFCFSDLPVMEKLGLYR
ECCCCCEEEECCCCCCCCCCCEEEECCCHHHHCCCCCCCCCEEEEEECCCCHHHHHCCHH
EEALADNDGHQPLPGPAAK
HHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA