Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is rhbE [H]

Identifier: 17546536

GI number: 17546536

Start: 1985883

End: 1987271

Strand: Direct

Name: rhbE [H]

Synonym: RSc1817

Alternate gene names: 17546536

Gene position: 1985883-1987271 (Clockwise)

Preceding gene: 17546535

Following gene: 17546537

Centisome position: 53.44

GC content: 62.2

Gene sequence:

>1389_bases
ATGAAGCCGACTGCTTGCACAACCCCAGCCGGCGAGATTCTCGATGTGGTCGGCATCGGGATTGGCCCGTTCAACCTGAG
CCTGGCTGCGTTGCTCGCCGAAGCCGGATACGACCGCACCGTATTTCTCGAACGCAAGCCGTATTTCAGCTGGCATCCCG
GCATGCTGCTCGAGGGGACAACGCTGCAGGTGCCGTTTCTTGCCGATCTGGTCAGCCTGGTCGCGCCAACGAGCCGCTTC
AGCTTTCTGAACTATCTGCAGGCCCACGACCGCCTTTACAAGTTCCTTTTCTTCGAGAACTTTCATATCCCTCGGCGGGA
GTATGACCACTATTGCCAGTGGGTCAGCGGTCAATTGCCCAGCCTGCGGTTCGGTAGCGAGGTCACGCGTGTCGACGTGG
TGGACGGTTGCTATCGCGTGACGGCGCGCGCAGGCAACAGCGAAAGCATCCACTACGCGCACAACCTTGTGCTCGGCACC
GGCACGCAACCGTGGTTACCGGCGTGCCTGCATACGCTCGCACAGCGCTTCCCGGAAAAGGTGATGCACACCGCCGACTA
CGCGCGACACTTCGATATCGCAGGCAAACAGCGTGTGCTGGTGCTGGGCTCCGGTCAGTCTGCCGCGGAAGTCATCCAGG
CCCTGCTCAATCGACAGTGCGACGACGAGGCGCCGCAATGCGAGCTGGACTGGGTCACCCGGGCCCCGGGTTTCCTGGCG
ATGGAATACTCGAAGCTGGGGCTTGAGCATTTCACGCCGGACTACACCGCTTACTTCCACGGGCTTGCGCAGAGCGTCAA
GGATCGGGTAGTGCCGAAGCAGGGCCTGTTCTACAAGGGCATCAGTTCCAAAACGATCTCGGCGATCTACGACTGCCTGT
ACCACCGCAGTGTCGGTGACGCCCCGCTGCCGGTTCACCTGCGCGCCTTGAGCGAACTGCGCCACGTGGAGCCGACCGCG
AATGGGCGGCTCGATGCGCGGTTCACTCACCTGCAGACAGGCCACACGTTTTCCATTGTGGTCGACGCGATCATATCGGG
CTCGGGCTACCGGTATACGTTGCCGTCGTTTCTCGATGGCCTGGGCGACCGTGTCCATTACGACGACATGAAACGGCTGA
AGATCGACGCCGGTTATCGGGTCGAGCATCGTGGTCCCGGGCAGATCTTCATGCAGAACGGCGAACTGCACACGCACGGC
ATCGGTGCGCCCGATTTGGGCCTCGGTGCTTGGCGGGCGGCGCACATTGCCAACCGGATTGCCGGGCATGAGCTGTATCG
CCTGCCGTCGCGGGTGGCATTCCAGACGTTCGGGGCCGGCGCGGAACAATCACCATCGACCGCCGGCACGACACCCAGCC
CCTCACATCAGACCATCGAGGCGATTTGA

Upstream 100 bases:

>100_bases
AAATGACCTTGTTGAATCCGGCGACCGACATGTCACATACCACTGTCCTCATGCTGTCTCTAACACGCCTTGCCGCTGAA
CCCAGCCTGGAGCCGCTGCG

Downstream 100 bases:

>100_bases
TGAAAGCTCGCAAAACGTACGTGCTCATTCCGGTGATGCCGACACCGAATGGCCCGCTGCATCTTGGCCACATCGCGGGC
CCGTTCCTCAAGATGGACAT

Product: siderophore biosynthesis oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MKPTACTTPAGEILDVVGIGIGPFNLSLAALLAEAGYDRTVFLERKPYFSWHPGMLLEGTTLQVPFLADLVSLVAPTSRF
SFLNYLQAHDRLYKFLFFENFHIPRREYDHYCQWVSGQLPSLRFGSEVTRVDVVDGCYRVTARAGNSESIHYAHNLVLGT
GTQPWLPACLHTLAQRFPEKVMHTADYARHFDIAGKQRVLVLGSGQSAAEVIQALLNRQCDDEAPQCELDWVTRAPGFLA
MEYSKLGLEHFTPDYTAYFHGLAQSVKDRVVPKQGLFYKGISSKTISAIYDCLYHRSVGDAPLPVHLRALSELRHVEPTA
NGRLDARFTHLQTGHTFSIVVDAIISGSGYRYTLPSFLDGLGDRVHYDDMKRLKIDAGYRVEHRGPGQIFMQNGELHTHG
IGAPDLGLGAWRAAHIANRIAGHELYRLPSRVAFQTFGAGAEQSPSTAGTTPSPSHQTIEAI

Sequences:

>Translated_462_residues
MKPTACTTPAGEILDVVGIGIGPFNLSLAALLAEAGYDRTVFLERKPYFSWHPGMLLEGTTLQVPFLADLVSLVAPTSRF
SFLNYLQAHDRLYKFLFFENFHIPRREYDHYCQWVSGQLPSLRFGSEVTRVDVVDGCYRVTARAGNSESIHYAHNLVLGT
GTQPWLPACLHTLAQRFPEKVMHTADYARHFDIAGKQRVLVLGSGQSAAEVIQALLNRQCDDEAPQCELDWVTRAPGFLA
MEYSKLGLEHFTPDYTAYFHGLAQSVKDRVVPKQGLFYKGISSKTISAIYDCLYHRSVGDAPLPVHLRALSELRHVEPTA
NGRLDARFTHLQTGHTFSIVVDAIISGSGYRYTLPSFLDGLGDRVHYDDMKRLKIDAGYRVEHRGPGQIFMQNGELHTHG
IGAPDLGLGAWRAAHIANRIAGHELYRLPSRVAFQTFGAGAEQSPSTAGTTPSPSHQTIEAI
>Mature_462_residues
MKPTACTTPAGEILDVVGIGIGPFNLSLAALLAEAGYDRTVFLERKPYFSWHPGMLLEGTTLQVPFLADLVSLVAPTSRF
SFLNYLQAHDRLYKFLFFENFHIPRREYDHYCQWVSGQLPSLRFGSEVTRVDVVDGCYRVTARAGNSESIHYAHNLVLGT
GTQPWLPACLHTLAQRFPEKVMHTADYARHFDIAGKQRVLVLGSGQSAAEVIQALLNRQCDDEAPQCELDWVTRAPGFLA
MEYSKLGLEHFTPDYTAYFHGLAQSVKDRVVPKQGLFYKGISSKTISAIYDCLYHRSVGDAPLPVHLRALSELRHVEPTA
NGRLDARFTHLQTGHTFSIVVDAIISGSGYRYTLPSFLDGLGDRVHYDDMKRLKIDAGYRVEHRGPGQIFMQNGELHTHG
IGAPDLGLGAWRAAHIANRIAGHELYRLPSRVAFQTFGAGAEQSPSTAGTTPSPSHQTIEAI

Specific function: Unknown

COG id: COG3486

COG function: function code Q; Lysine/ornithine N-monooxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51236; Mature: 51236

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTACTTPAGEILDVVGIGIGPFNLSLAALLAEAGYDRTVFLERKPYFSWHPGMLLEGT
CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCC
TLQVPFLADLVSLVAPTSRFSFLNYLQAHDRLYKFLFFENFHIPRREYDHYCQWVSGQLP
EEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
SLRFGSEVTRVDVVDGCYRVTARAGNSESIHYAHNLVLGTGTQPWLPACLHTLAQRFPEK
CCCCCCCCEEEEHHHHHEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
VMHTADYARHFDIAGKQRVLVLGSGQSAAEVIQALLNRQCDDEAPQCELDWVTRAPGFLA
HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEE
MEYSKLGLEHFTPDYTAYFHGLAQSVKDRVVPKQGLFYKGISSKTISAIYDCLYHRSVGD
EHHHHHCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHCCCCC
APLPVHLRALSELRHVEPTANGRLDARFTHLQTGHTFSIVVDAIISGSGYRYTLPSFLDG
CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEECHHHHHH
LGDRVHYDDMKRLKIDAGYRVEHRGPGQIFMQNGELHTHGIGAPDLGLGAWRAAHIANRI
CCCCCCCCCHHEEEECCCEEEECCCCCEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHH
AGHELYRLPSRVAFQTFGAGAEQSPSTAGTTPSPSHQTIEAI
HHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MKPTACTTPAGEILDVVGIGIGPFNLSLAALLAEAGYDRTVFLERKPYFSWHPGMLLEGT
CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCC
TLQVPFLADLVSLVAPTSRFSFLNYLQAHDRLYKFLFFENFHIPRREYDHYCQWVSGQLP
EEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
SLRFGSEVTRVDVVDGCYRVTARAGNSESIHYAHNLVLGTGTQPWLPACLHTLAQRFPEK
CCCCCCCCEEEEHHHHHEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
VMHTADYARHFDIAGKQRVLVLGSGQSAAEVIQALLNRQCDDEAPQCELDWVTRAPGFLA
HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEE
MEYSKLGLEHFTPDYTAYFHGLAQSVKDRVVPKQGLFYKGISSKTISAIYDCLYHRSVGD
EHHHHHCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHCCCCC
APLPVHLRALSELRHVEPTANGRLDARFTHLQTGHTFSIVVDAIISGSGYRYTLPSFLDG
CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEECHHHHHH
LGDRVHYDDMKRLKIDAGYRVEHRGPGQIFMQNGELHTHGIGAPDLGLGAWRAAHIANRI
CCCCCCCCCHHEEEECCCEEEECCCCCEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHH
AGHELYRLPSRVAFQTFGAGAEQSPSTAGTTPSPSHQTIEAI
HHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11274118; 11481432 [H]