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The map label for this gene is yafS [H]

Identifier: 17546233

GI number: 17546233

Start: 1615365

End: 1616138

Strand: Reverse

Name: yafS [H]

Synonym: RSc1514

Alternate gene names: 17546233

Gene position: 1616138-1615365 (Counterclockwise)

Preceding gene: 17546243

Following gene: 17546232

Centisome position: 43.49

GC content: 70.03

Gene sequence:

>774_bases
ATGTTCGGCTTCCACGCGCTGCAGCTCGGTCACCCGGGCTTCGGCGCGCTGCGGGAGAACCGCATCCCCCTGATCGCCCG
TGTGATCGACGATATCGATCCCGGTGCGCCGATCGACACACTCGACCCGGCAGACCCCGATCCGCCCGGCGAGGCCGATG
CCGAGCCCGTCGTGCCGCAGCGCCAGGCCACGCCTCGCGTGATCTGCCGCTACGACGAGCTGCCGTTCGCCTCGCAGAGC
ATCGACCTGGTCGCCCTGCCCCACGTGCTGGAGTTCACCGACGACCCGCACGAAGTGCTGCGCGAGGTGGCGCGCGTGCT
GATGCCCGAGGGCCGGCTCGTCATCACGGGCTTCAACCCGCTGAGCCTGTGGGGCATGCGCCAGGGCATGCGGCGGCTGG
GAACGGAATCATTCCTGCCGGCGCAGAGCCAGATGATTGCCTTCACGCGGCTCAAGGACTGGCTCAAGCTGCTCGGATTT
GATATCGTGCGCGGCCGCTTCGGCTGCTACTGCCCGCCCAACCGCACCGACAAATGGCTGCAGCGCACGGCCTTCATGGA
GAAGGCCGGCGACCGCTGGTGGCCGATCTTCGGCGCGGTCTACATGCTGCAGGCGGTCAAGCGCGTGCGCAGCGTCCGGC
TGGTCGGACCGGCATGGAAGACGCGCAAGTCGCCGACGCTGGTGCCGGCCGGCACGCCGGTGGCCACGCCGTCGGGCTCG
CACACCACCAAGACACCGCCCGTCGCCGCGCGCGACGGCAAGTCCGGCGCCTGA

Upstream 100 bases:

>100_bases
CGATCGTCGCATTATAGATTGGCATCACTGGCTTGCTTCGCCGCCCGGGCAATACGTCCTGCGTTGGGAACAGGCCCAAT
TCGACCGCACCGTCGCCGAC

Downstream 100 bases:

>100_bases
GCCGGGCCCGCGGTATCCCCCTCACCTATCACCGATCGTTTTCATGCAGGAAGTCACCGTCTATTCCGATGGCGCATGCA
AGGGCAACCCGGGCCTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MFGFHALQLGHPGFGALRENRIPLIARVIDDIDPGAPIDTLDPADPDPPGEADAEPVVPQRQATPRVICRYDELPFASQS
IDLVALPHVLEFTDDPHEVLREVARVLMPEGRLVITGFNPLSLWGMRQGMRRLGTESFLPAQSQMIAFTRLKDWLKLLGF
DIVRGRFGCYCPPNRTDKWLQRTAFMEKAGDRWWPIFGAVYMLQAVKRVRSVRLVGPAWKTRKSPTLVPAGTPVATPSGS
HTTKTPPVAARDGKSGA

Sequences:

>Translated_257_residues
MFGFHALQLGHPGFGALRENRIPLIARVIDDIDPGAPIDTLDPADPDPPGEADAEPVVPQRQATPRVICRYDELPFASQS
IDLVALPHVLEFTDDPHEVLREVARVLMPEGRLVITGFNPLSLWGMRQGMRRLGTESFLPAQSQMIAFTRLKDWLKLLGF
DIVRGRFGCYCPPNRTDKWLQRTAFMEKAGDRWWPIFGAVYMLQAVKRVRSVRLVGPAWKTRKSPTLVPAGTPVATPSGS
HTTKTPPVAARDGKSGA
>Mature_257_residues
MFGFHALQLGHPGFGALRENRIPLIARVIDDIDPGAPIDTLDPADPDPPGEADAEPVVPQRQATPRVICRYDELPFASQS
IDLVALPHVLEFTDDPHEVLREVARVLMPEGRLVITGFNPLSLWGMRQGMRRLGTESFLPAQSQMIAFTRLKDWLKLLGF
DIVRGRFGCYCPPNRTDKWLQRTAFMEKAGDRWWPIFGAVYMLQAVKRVRSVRLVGPAWKTRKSPTLVPAGTPVATPSGS
HTTKTPPVAARDGKSGA

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=165, Percent_Identity=32.1212121212121, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28480; Mature: 28480

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGFHALQLGHPGFGALRENRIPLIARVIDDIDPGAPIDTLDPADPDPPGEADAEPVVPQ
CCCCEEEEECCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RQATPRVICRYDELPFASQSIDLVALPHVLEFTDDPHEVLREVARVLMPEGRLVITGFNP
CCCCCEEEEEECCCCCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCH
LSLWGMRQGMRRLGTESFLPAQSQMIAFTRLKDWLKLLGFDIVRGRFGCYCPPNRTDKWL
HHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
QRTAFMEKAGDRWWPIFGAVYMLQAVKRVRSVRLVGPAWKTRKSPTLVPAGTPVATPSGS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEECCHHHCCCCCCEEECCCCCCCCCCC
HTTKTPPVAARDGKSGA
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFGFHALQLGHPGFGALRENRIPLIARVIDDIDPGAPIDTLDPADPDPPGEADAEPVVPQ
CCCCEEEEECCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RQATPRVICRYDELPFASQSIDLVALPHVLEFTDDPHEVLREVARVLMPEGRLVITGFNP
CCCCCEEEEEECCCCCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCH
LSLWGMRQGMRRLGTESFLPAQSQMIAFTRLKDWLKLLGFDIVRGRFGCYCPPNRTDKWL
HHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
QRTAFMEKAGDRWWPIFGAVYMLQAVKRVRSVRLVGPAWKTRKSPTLVPAGTPVATPSGS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEECCHHHCCCCCCEEECCCCCCCCCCC
HTTKTPPVAARDGKSGA
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]