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The map label for this gene is 17546076

Identifier: 17546076

GI number: 17546076

Start: 1445546

End: 1447489

Strand: Direct

Name: 17546076

Synonym: RSc1357

Alternate gene names: NA

Gene position: 1445546-1447489 (Clockwise)

Preceding gene: 17546075

Following gene: 17546077

Centisome position: 38.9

GC content: 66.46

Gene sequence:

>1944_bases
ATGATGTTCAAGCGCATCGACAGCAGTGTCTTCAGTCCCTATGTTCGTCCCGAGCCGTCCGCGCCTCCGCTGCCGGAGCA
GGGCGCCCCGTCCGGGCGCGCCGCCAACAGCGCTTCCCATCCCTATATTCGTCCCGAGCCGTCCGCACCGCTGCTGCCGG
AGGGGGGATTCCCGCACGTACCGGATCAGGCGGGCGAGCAGCGGGCCTACTCGCCCTCCCGCTCGTCGGCCGGCGTCTCG
TCGTCGCCCCTGGGCGGGCTGGCGGCAATGCGGCTCGATAGCGGATCGGCCGGCACGGCGCCCATGCTGCGCAGCCGGTT
GCCTCCCGCGCCTTCTGCGCCTTCCGGGGTGCCCCAGGTGCGGAATATCGAGGAGATGCCGGCCGGAGTGCTGCAGCACG
TCGCCAGCTTCCTGGACCCCCGGTCCAGGCGGGCGCTGAGCCAGGTCAGCACCACCATGAATGATGCCGCCCGATCGAGC
CAGACGCACATGCAGGCCTGGAACAAGGCGATGCTCGGCCAACTGCATCGCTATCCCAACCTGCAAAGCCTGCGTCTGCG
GGGCGACATCACGCTCGATGAGCTGAAAGCGCTCCCCAAGACGTTGCGCCACATCGACCTGGGCGAGTGCGATCCCGGCT
GCGGGGCCAAATCGCATGCCGCGATCGAGTATCTCGCCACCTTGCCGCTCGAGTCGCTCAACGTGAAGGGCGCCGCGATC
GGCGACCGCGGCGCGGCGCTGTTGGCCGGCAACCGCTCGCTCAAGACGCTCAACGTGGCGGATGGCGGGATCAGCGAGGT
GGGCGCCAGGAAGCTGGCCGACCACGCGTCGCTCGAGTCGCTCGACATGACCGGCAACCAGATCGATGCCCGGGGCGCGC
AGCATCTGGCGACCAGCGAGTCGATCCAGACGCTTCGCCTGTGCTGCTGCGGTGTCACCGATCCCGGCATCCAGGCGCTG
GCGGGCAACCGCCAGCTGAAATCGCTCGACGTGAGCGGGAACCACATCAATGAAGATGCGCTCCGCGCGCTGGCGGCCAA
CCCGTCGCTGACCACGCTCGACGTCAGCTGTAACCGCCAGACCCCAGTGGGAGAGCCGCAGTCGGTGGAACAAGGGGTGT
CGATGGCGCTCGCCCTGGCCGAGGGGCTGGTGGGGCGCGAGACGCCGCTCGCTTCGCTCAAGGCGGATGGAAACGCATTC
GTAGATTTCGCGGTGGAGATGCTGGCGTTCCCCACGATCAGGACAGCATCGCTCTCGCTCAAGAGCAATTTCATCGGGCC
CGAAGGTGCCCAGAAGCTGGCCGAAAACCCGGCGCTCAAGTCACTCGATCTGACTCGGAACAAGATCGGTGACGCGGGCG
CGGAGGCGCTGTCGCACAGCCGGTCGCTGAAGACGCTTAGCGTGCTCAACTGTGACGTGAAGGATCCCGGCGCGCAGGCT
CTGGCGCGCAACCCAACGCTGACCACCCTTGATCTGGGCAATCTCATCAGCGAAAAGCAGAACCCGGCGGCGCGACAGCA
GGAGCAAGACGAGTTTGACACGACGGCCAACGAAATCACAGAGAACGGGACGCGGGCATTGGCGCAAAGCCCTTCGCTGA
TTTCGCTCAGCGTCCAGGGCAACCTGTGCGAAGACGCCGGCGTACTGCCGCTGGCGAGAAGCCCCAGGCTGACCTCGCTG
AACGTGGCCTACACCAACATGACACTCGAAAGCGCACGGGAGCTGGCCAGCAATCCGGTGCTCACCTCGCTCAACGTGCG
CTGGAACTATGAGCATCTCGGTACGGCAGGGGTGCTGGAGCTGGCCAAGAGCCAATCGCTCACCTTCCTCGACGCGCGCG
ACACCTGCATGGGCGAGGCAGGGGCCCTTGCGCTGGAGGCCAATACGCGCATCAAGGGCACGCCTGACGATCCCAACTTC
ATCCGAGACTCGTACCGGGGTTGA

Upstream 100 bases:

>100_bases
CTGAGCCGTTCGTTTGCCGGCAGCTTCTTTCGTGGTGCCGGCTGGCGTCCTGGTCGGATTCCGTCAAGCTCGCGCCTGTC
ATGGTCATGCAGTGGAGCCG

Downstream 100 bases:

>100_bases
GGCGGGGCGGCACTGTTTGCCTTGGCGCACGGCGGGGTGCGCGTGACGGATGCGGTCATCCACTGCAGCGGCTCGGCCGG
GGGTATCCCGGCCGAGCCGT

Product: GALA protein 5

Products: NA

Alternate protein names: GALA Protein; Type III Effector; Leucine-Rich Repeat Ribonuclease Inhibitor Subtype; Leucine-Rich Repeat-Containing Ribonuclease Inhibitor; Type III Effector Gala6 Protein; Type III Effector Protein; Leucine-Rich Repeat-Containing Protein

Number of amino acids: Translated: 647; Mature: 647

Protein sequence:

>647_residues
MMFKRIDSSVFSPYVRPEPSAPPLPEQGAPSGRAANSASHPYIRPEPSAPLLPEGGFPHVPDQAGEQRAYSPSRSSAGVS
SSPLGGLAAMRLDSGSAGTAPMLRSRLPPAPSAPSGVPQVRNIEEMPAGVLQHVASFLDPRSRRALSQVSTTMNDAARSS
QTHMQAWNKAMLGQLHRYPNLQSLRLRGDITLDELKALPKTLRHIDLGECDPGCGAKSHAAIEYLATLPLESLNVKGAAI
GDRGAALLAGNRSLKTLNVADGGISEVGARKLADHASLESLDMTGNQIDARGAQHLATSESIQTLRLCCCGVTDPGIQAL
AGNRQLKSLDVSGNHINEDALRALAANPSLTTLDVSCNRQTPVGEPQSVEQGVSMALALAEGLVGRETPLASLKADGNAF
VDFAVEMLAFPTIRTASLSLKSNFIGPEGAQKLAENPALKSLDLTRNKIGDAGAEALSHSRSLKTLSVLNCDVKDPGAQA
LARNPTLTTLDLGNLISEKQNPAARQQEQDEFDTTANEITENGTRALAQSPSLISLSVQGNLCEDAGVLPLARSPRLTSL
NVAYTNMTLESARELASNPVLTSLNVRWNYEHLGTAGVLELAKSQSLTFLDARDTCMGEAGALALEANTRIKGTPDDPNF
IRDSYRG

Sequences:

>Translated_647_residues
MMFKRIDSSVFSPYVRPEPSAPPLPEQGAPSGRAANSASHPYIRPEPSAPLLPEGGFPHVPDQAGEQRAYSPSRSSAGVS
SSPLGGLAAMRLDSGSAGTAPMLRSRLPPAPSAPSGVPQVRNIEEMPAGVLQHVASFLDPRSRRALSQVSTTMNDAARSS
QTHMQAWNKAMLGQLHRYPNLQSLRLRGDITLDELKALPKTLRHIDLGECDPGCGAKSHAAIEYLATLPLESLNVKGAAI
GDRGAALLAGNRSLKTLNVADGGISEVGARKLADHASLESLDMTGNQIDARGAQHLATSESIQTLRLCCCGVTDPGIQAL
AGNRQLKSLDVSGNHINEDALRALAANPSLTTLDVSCNRQTPVGEPQSVEQGVSMALALAEGLVGRETPLASLKADGNAF
VDFAVEMLAFPTIRTASLSLKSNFIGPEGAQKLAENPALKSLDLTRNKIGDAGAEALSHSRSLKTLSVLNCDVKDPGAQA
LARNPTLTTLDLGNLISEKQNPAARQQEQDEFDTTANEITENGTRALAQSPSLISLSVQGNLCEDAGVLPLARSPRLTSL
NVAYTNMTLESARELASNPVLTSLNVRWNYEHLGTAGVLELAKSQSLTFLDARDTCMGEAGALALEANTRIKGTPDDPNF
IRDSYRG
>Mature_647_residues
MMFKRIDSSVFSPYVRPEPSAPPLPEQGAPSGRAANSASHPYIRPEPSAPLLPEGGFPHVPDQAGEQRAYSPSRSSAGVS
SSPLGGLAAMRLDSGSAGTAPMLRSRLPPAPSAPSGVPQVRNIEEMPAGVLQHVASFLDPRSRRALSQVSTTMNDAARSS
QTHMQAWNKAMLGQLHRYPNLQSLRLRGDITLDELKALPKTLRHIDLGECDPGCGAKSHAAIEYLATLPLESLNVKGAAI
GDRGAALLAGNRSLKTLNVADGGISEVGARKLADHASLESLDMTGNQIDARGAQHLATSESIQTLRLCCCGVTDPGIQAL
AGNRQLKSLDVSGNHINEDALRALAANPSLTTLDVSCNRQTPVGEPQSVEQGVSMALALAEGLVGRETPLASLKADGNAF
VDFAVEMLAFPTIRTASLSLKSNFIGPEGAQKLAENPALKSLDLTRNKIGDAGAEALSHSRSLKTLSVLNCDVKDPGAQA
LARNPTLTTLDLGNLISEKQNPAARQQEQDEFDTTANEITENGTRALAQSPSLISLSVQGNLCEDAGVLPLARSPRLTSL
NVAYTNMTLESARELASNPVLTSLNVRWNYEHLGTAGVLELAKSQSLTFLDARDTCMGEAGALALEANTRIKGTPDDPNF
IRDSYRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI118918429, Length=472, Percent_Identity=29.0254237288136, Blast_Score=87, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68314; Mature: 68314

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50181 FBOX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFKRIDSSVFSPYVRPEPSAPPLPEQGAPSGRAANSASHPYIRPEPSAPLLPEGGFPHV
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDQAGEQRAYSPSRSSAGVSSSPLGGLAAMRLDSGSAGTAPMLRSRLPPAPSAPSGVPQV
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCC
RNIEEMPAGVLQHVASFLDPRSRRALSQVSTTMNDAARSSQTHMQAWNKAMLGQLHRYPN
CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LQSLRLRGDITLDELKALPKTLRHIDLGECDPGCGAKSHAAIEYLATLPLESLNVKGAAI
CCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCEEE
GDRGAALLAGNRSLKTLNVADGGISEVGARKLADHASLESLDMTGNQIDARGAQHLATSE
CCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCHHHHCCCCCCHHCCCHHHHHHHH
SIQTLRLCCCGVTDPGIQALAGNRQLKSLDVSGNHINEDALRALAANPSLTTLDVSCNRQ
HHHHHHHHHCCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCC
TPVGEPQSVEQGVSMALALAEGLVGRETPLASLKADGNAFVDFAVEMLAFPTIRTASLSL
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHCCCEEEEEEEH
KSNFIGPEGAQKLAENPALKSLDLTRNKIGDAGAEALSHSRSLKTLSVLNCDVKDPGAQA
HHCCCCCHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHH
LARNPTLTTLDLGNLISEKQNPAARQQEQDEFDTTANEITENGTRALAQSPSLISLSVQG
HHCCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
NLCEDAGVLPLARSPRLTSLNVAYTNMTLESARELASNPVLTSLNVRWNYEHLGTAGVLE
CCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCEEEEEEEECHHHHCCHHHHH
LAKSQSLTFLDARDTCMGEAGALALEANTRIKGTPDDPNFIRDSYRG
HHHCCCEEEEECCHHHCCCCCEEEEECCCEECCCCCCCHHHHHCCCC
>Mature Secondary Structure
MMFKRIDSSVFSPYVRPEPSAPPLPEQGAPSGRAANSASHPYIRPEPSAPLLPEGGFPHV
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDQAGEQRAYSPSRSSAGVSSSPLGGLAAMRLDSGSAGTAPMLRSRLPPAPSAPSGVPQV
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCC
RNIEEMPAGVLQHVASFLDPRSRRALSQVSTTMNDAARSSQTHMQAWNKAMLGQLHRYPN
CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LQSLRLRGDITLDELKALPKTLRHIDLGECDPGCGAKSHAAIEYLATLPLESLNVKGAAI
CCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCEEE
GDRGAALLAGNRSLKTLNVADGGISEVGARKLADHASLESLDMTGNQIDARGAQHLATSE
CCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCHHHHCCCCCCHHCCCHHHHHHHH
SIQTLRLCCCGVTDPGIQALAGNRQLKSLDVSGNHINEDALRALAANPSLTTLDVSCNRQ
HHHHHHHHHCCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCC
TPVGEPQSVEQGVSMALALAEGLVGRETPLASLKADGNAFVDFAVEMLAFPTIRTASLSL
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHCCCEEEEEEEH
KSNFIGPEGAQKLAENPALKSLDLTRNKIGDAGAEALSHSRSLKTLSVLNCDVKDPGAQA
HHCCCCCHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHH
LARNPTLTTLDLGNLISEKQNPAARQQEQDEFDTTANEITENGTRALAQSPSLISLSVQG
HHCCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
NLCEDAGVLPLARSPRLTSLNVAYTNMTLESARELASNPVLTSLNVRWNYEHLGTAGVLE
CCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCEEEEEEEECHHHHCCHHHHH
LAKSQSLTFLDARDTCMGEAGALALEANTRIKGTPDDPNFIRDSYRG
HHHCCCEEEEECCHHHCCCCCEEEEECCCEECCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA