| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is iolH [H]
Identifier: 17545963
GI number: 17545963
Start: 1319525
End: 1320436
Strand: Direct
Name: iolH [H]
Synonym: RSc1244
Alternate gene names: 17545963
Gene position: 1319525-1320436 (Clockwise)
Preceding gene: 17545962
Following gene: 17545964
Centisome position: 35.51
GC content: 66.01
Gene sequence:
>912_bases ATGAAGATCGCGCTGGACCCCTACATGATTCGCCACCTGCCGCTCGACGCACTGCCCGGTGCCGTCGCCGAGCTGGGTTA TGACCAGATCGAGCTGTCGCCGCGCAGCGATTTTCTCGACTGGTGGGTGATGCCGCGCGCCACCCGCGAGCGCATGGCCG CGTTCAAGCAGGCGATGCGATCGAGCGGCGTCGGGCTGGCGTCGCTGCAGCCGATGTATCGCTGGGCCAGCCCATTCGAG GACGAGCGGCAATGGGCGGTCCGCTGCTGGCGCAAGGCCATCGAAGTCGCGGTCGAGATGGAGTGCGGGCTGATGGTGTC CGAATTCGGCCGCGGCGCCTCGCCGGAGCGGTCGGTGGGTGAGCGCCCGGGCGCGAATCCGAGGGAGATGTGCGAAGCCG CATGGTTCCGCTCGATGGACGAGCTGCTGCCGATGTTCGAACGCGAGGGCATCACGCTGTCGGTGGAGCCGCATCCGGAA GACTGGATCGAACAGATGCAGTCGGCCGTCGACATCGTGAAGAACATCGGCTCGACGGCGCTGAAGCTGTCGTACATCGC GCCGCACACGTTCTATTACGGCGACGACATGGCCGCGATGATCCGCGAGGCTGCGCCGGTGCTGGCGCACGTGCGTGTCG CCGATACGTTCGACCACCGCAAGAGCAGCCAGCTGCGCTACATCGTCAATCCGCCCGGTTCGACGCACATCCGTGTACAC CAGCACCTCGACATCGGCCAGGGCGAGATCGACTGGGATGTGTTCTTCGGCGCGCTGGGCGAGGTCGGCTTCGACGGCGT CATGTCGTCCTGCGTGTTCGCCTGGGAAGACCGCGCGGAGGCATCGTCCCGCTTCATGCGCGGTGAACTGCAACGTTACA TCGACCGATATTTCCGCGGCGCCGTGCGCTGA
Upstream 100 bases:
>100_bases CCAGTACCGCAACAAGAAGACGCGCCGCTGACCGGCCGCTACGAACCCCTTTGCCGCTTTCTGAAGTGACATCGATTTCC GAATGACCAGAGGAACCGGG
Downstream 100 bases:
>100_bases ATCCACCAATCGACCCCAACCATGAACCACCGCATCCAATTTGGCATCAACCGGATCAGCGCACCGCGCCAGACGTTTGC CGACTATCTGGCCATGTGCA
Product: protein implicated IN myo-inositol catabolique pathway
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MKIALDPYMIRHLPLDALPGAVAELGYDQIELSPRSDFLDWWVMPRATRERMAAFKQAMRSSGVGLASLQPMYRWASPFE DERQWAVRCWRKAIEVAVEMECGLMVSEFGRGASPERSVGERPGANPREMCEAAWFRSMDELLPMFEREGITLSVEPHPE DWIEQMQSAVDIVKNIGSTALKLSYIAPHTFYYGDDMAAMIREAAPVLAHVRVADTFDHRKSSQLRYIVNPPGSTHIRVH QHLDIGQGEIDWDVFFGALGEVGFDGVMSSCVFAWEDRAEASSRFMRGELQRYIDRYFRGAVR
Sequences:
>Translated_303_residues MKIALDPYMIRHLPLDALPGAVAELGYDQIELSPRSDFLDWWVMPRATRERMAAFKQAMRSSGVGLASLQPMYRWASPFE DERQWAVRCWRKAIEVAVEMECGLMVSEFGRGASPERSVGERPGANPREMCEAAWFRSMDELLPMFEREGITLSVEPHPE DWIEQMQSAVDIVKNIGSTALKLSYIAPHTFYYGDDMAAMIREAAPVLAHVRVADTFDHRKSSQLRYIVNPPGSTHIRVH QHLDIGQGEIDWDVFFGALGEVGFDGVMSSCVFAWEDRAEASSRFMRGELQRYIDRYFRGAVR >Mature_303_residues MKIALDPYMIRHLPLDALPGAVAELGYDQIELSPRSDFLDWWVMPRATRERMAAFKQAMRSSGVGLASLQPMYRWASPFE DERQWAVRCWRKAIEVAVEMECGLMVSEFGRGASPERSVGERPGANPREMCEAAWFRSMDELLPMFEREGITLSVEPHPE DWIEQMQSAVDIVKNIGSTALKLSYIAPHTFYYGDDMAAMIREAAPVLAHVRVADTFDHRKSSQLRYIVNPPGSTHIRVH QHLDIGQGEIDWDVFFGALGEVGFDGVMSSCVFAWEDRAEASSRFMRGELQRYIDRYFRGAVR
Specific function: Unknown
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 34543; Mature: 34543
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIALDPYMIRHLPLDALPGAVAELGYDQIELSPRSDFLDWWVMPRATRERMAAFKQAMR CEEECCHHHHHHCCHHHCCHHHHHCCCCCEECCCCCCHHHHHHCCHHHHHHHHHHHHHHH SSGVGLASLQPMYRWASPFEDERQWAVRCWRKAIEVAVEMECGLMVSEFGRGASPERSVG HCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCC ERPGANPREMCEAAWFRSMDELLPMFEREGITLSVEPHPEDWIEQMQSAVDIVKNIGSTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHH LKLSYIAPHTFYYGDDMAAMIREAAPVLAHVRVADTFDHRKSSQLRYIVNPPGSTHIRVH EEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEE QHLDIGQGEIDWDVFFGALGEVGFDGVMSSCVFAWEDRAEASSRFMRGELQRYIDRYFRG ECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVR CCC >Mature Secondary Structure MKIALDPYMIRHLPLDALPGAVAELGYDQIELSPRSDFLDWWVMPRATRERMAAFKQAMR CEEECCHHHHHHCCHHHCCHHHHHCCCCCEECCCCCCHHHHHHCCHHHHHHHHHHHHHHH SSGVGLASLQPMYRWASPFEDERQWAVRCWRKAIEVAVEMECGLMVSEFGRGASPERSVG HCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCC ERPGANPREMCEAAWFRSMDELLPMFEREGITLSVEPHPEDWIEQMQSAVDIVKNIGSTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHH LKLSYIAPHTFYYGDDMAAMIREAAPVLAHVRVADTFDHRKSSQLRYIVNPPGSTHIRVH EEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEE QHLDIGQGEIDWDVFFGALGEVGFDGVMSSCVFAWEDRAEASSRFMRGELQRYIDRYFRG ECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7952181; 9384377; 1761221 [H]