| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is mglC [H]
Identifier: 17545962
GI number: 17545962
Start: 1318430
End: 1319455
Strand: Direct
Name: mglC [H]
Synonym: RSc1243
Alternate gene names: 17545962
Gene position: 1318430-1319455 (Clockwise)
Preceding gene: 17545961
Following gene: 17545963
Centisome position: 35.48
GC content: 66.37
Gene sequence:
>1026_bases ATGGGAACTTCCAATGCAATCGCATACGCGCAGCCGATGCTGGGCAAGCCGCGGCGCGCCAGGTGGCCGCAGGAACTGAG CATTTTCCTGGTGCTGGTCGGCATCGGCCTGTTCTTCGAGGCCGCAGGCTGGATGGTGGTCGGCCAGAGCTTTCTCTTCA ACGCGGAGCGGCTGCAGATCATCATCCTGCAGATGGCGGTGATCGGCATCATCGCCGTGGGGGTGAACCTCGTCATCATC ACCAGCGGCATCGATCTGTCTTCCGGCTCGGTGGTGGCCGCCGCCGCGGTCGTCTCGGCCAGCCTCGCGCAGGTGTCGGA CTTTCCGCGCGCGGTGTTTCCGCACCTGACCGACTTGCCGGTGATCTGGCCGGTGCTGGCCGGCGTCTGCGTCGGGCTGC TGGTCGGGCTGATCAACGGCTCCCTGATCGCCTTGACCGGTATCCCGCCGTTCATCGCGACGCTGGGCACGATGGTGGCC GCGCGCGGGTTTGCCAAATGGTTCACCAACGGCACGCCCGTGTCGATGCTGACCGACCCGTTCGCGGCCATCGGTGCGGG CGCCAATCCGGTGATCATCTTCCTCGTGATCGCGGCGATCTTCCATGTGGTGCTGCGCTATACGCGCTTCGGCAAGTACA CGTACGCGATCGGCGCCAACCGCCAGGCGGCCGTGGTCTCGGGCATCAACGTGCATCGCCAGCTGATCTGGGTCTACGCG ATTGCCGGTGTGCTCAGCGGCATTGCCGGCACGGTGACGGCGGCGCGCGCCATCTCAGGGCAGTCGGGCATGGGCGTCAT GTATGAGCTGGACGCGATCGCGGCGGTCGTGATCGGCGGCACCTCGCTGTCCGGCGGCCTGGGGCGCATCACGGGCACGG TGATCGGCGTGCTGATCCTGGGCGTGATGGCGTCGGGCTTCACGTTCATCCGCATCGACGCGTACTACCAGGAGATGGTC AAGGGCGCCATCATCGTCGCGGCGGTCGTCGCCGACCAGTACCGCAACAAGAAGACGCGCCGCTGA
Upstream 100 bases:
>100_bases GCCGCGTGACCGGCATCGTCGATCGCAAGGACGCGAGCCAGGTCCGGGTCATGGAACTGGCTTCCCGCTGAGCAGGGGAC CCGGCATGGAGACAAGGGAC
Downstream 100 bases:
>100_bases CCGGCCGCTACGAACCCCTTTGCCGCTTTCTGAAGTGACATCGATTTCCGAATGACCAGAGGAACCGGGATGAAGATCGC GCTGGACCCCTACATGATTC
Product: sugar transmembrane ABC transporter protein
Products: ADP; phosphate; ribose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MGTSNAIAYAQPMLGKPRRARWPQELSIFLVLVGIGLFFEAAGWMVVGQSFLFNAERLQIIILQMAVIGIIAVGVNLVII TSGIDLSSGSVVAAAAVVSASLAQVSDFPRAVFPHLTDLPVIWPVLAGVCVGLLVGLINGSLIALTGIPPFIATLGTMVA ARGFAKWFTNGTPVSMLTDPFAAIGAGANPVIIFLVIAAIFHVVLRYTRFGKYTYAIGANRQAAVVSGINVHRQLIWVYA IAGVLSGIAGTVTAARAISGQSGMGVMYELDAIAAVVIGGTSLSGGLGRITGTVIGVLILGVMASGFTFIRIDAYYQEMV KGAIIVAAVVADQYRNKKTRR
Sequences:
>Translated_341_residues MGTSNAIAYAQPMLGKPRRARWPQELSIFLVLVGIGLFFEAAGWMVVGQSFLFNAERLQIIILQMAVIGIIAVGVNLVII TSGIDLSSGSVVAAAAVVSASLAQVSDFPRAVFPHLTDLPVIWPVLAGVCVGLLVGLINGSLIALTGIPPFIATLGTMVA ARGFAKWFTNGTPVSMLTDPFAAIGAGANPVIIFLVIAAIFHVVLRYTRFGKYTYAIGANRQAAVVSGINVHRQLIWVYA IAGVLSGIAGTVTAARAISGQSGMGVMYELDAIAAVVIGGTSLSGGLGRITGTVIGVLILGVMASGFTFIRIDAYYQEMV KGAIIVAAVVADQYRNKKTRR >Mature_340_residues GTSNAIAYAQPMLGKPRRARWPQELSIFLVLVGIGLFFEAAGWMVVGQSFLFNAERLQIIILQMAVIGIIAVGVNLVIIT SGIDLSSGSVVAAAAVVSASLAQVSDFPRAVFPHLTDLPVIWPVLAGVCVGLLVGLINGSLIALTGIPPFIATLGTMVAA RGFAKWFTNGTPVSMLTDPFAAIGAGANPVIIFLVIAAIFHVVLRYTRFGKYTYAIGANRQAAVVSGINVHRQLIWVYAI AGVLSGIAGTVTAARAISGQSGMGVMYELDAIAAVVIGGTSLSGGLGRITGTVIGVLILGVMASGFTFIRIDAYYQEMVK GAIIVAAVVADQYRNKKTRR
Specific function: Part of the binding-protein-dependent transport system for galactoside. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1172
COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790191, Length=295, Percent_Identity=40.3389830508475, Blast_Score=165, Evalue=3e-42, Organism=Escherichia coli, GI1788471, Length=289, Percent_Identity=41.8685121107266, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI1788896, Length=287, Percent_Identity=35.8885017421603, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI145693152, Length=285, Percent_Identity=37.5438596491228, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1790524, Length=293, Percent_Identity=34.4709897610922, Blast_Score=134, Evalue=9e-33, Organism=Escherichia coli, GI1789992, Length=373, Percent_Identity=29.2225201072386, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI145693214, Length=304, Percent_Identity=34.5394736842105, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI87082395, Length=265, Percent_Identity=35.4716981132075, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787794, Length=301, Percent_Identity=29.5681063122924, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787793, Length=273, Percent_Identity=31.8681318681319, Blast_Score=81, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 35607; Mature: 35476
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTSNAIAYAQPMLGKPRRARWPQELSIFLVLVGIGLFFEAAGWMVVGQSFLFNAERLQI CCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEECHHHHCCHHHHHH IILQMAVIGIIAVGVNLVIITSGIDLSSGSVVAAAAVVSASLAQVSDFPRAVFPHLTDLP HHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCH VIWPVLAGVCVGLLVGLINGSLIALTGIPPFIATLGTMVAARGFAKWFTNGTPVSMLTDP HHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC FAAIGAGANPVIIFLVIAAIFHVVLRYTRFGKYTYAIGANRQAAVVSGINVHRQLIWVYA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCHHHHHHHHHHHH IAGVLSGIAGTVTAARAISGQSGMGVMYELDAIAAVVIGGTSLSGGLGRITGTVIGVLIL HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHEECCCCCCCCHHHHHHHHHHHHHH GVMASGFTFIRIDAYYQEMVKGAIIVAAVVADQYRNKKTRR HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GTSNAIAYAQPMLGKPRRARWPQELSIFLVLVGIGLFFEAAGWMVVGQSFLFNAERLQI CCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEECHHHHCCHHHHHH IILQMAVIGIIAVGVNLVIITSGIDLSSGSVVAAAAVVSASLAQVSDFPRAVFPHLTDLP HHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCH VIWPVLAGVCVGLLVGLINGSLIALTGIPPFIATLGTMVAARGFAKWFTNGTPVSMLTDP HHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC FAAIGAGANPVIIFLVIAAIFHVVLRYTRFGKYTYAIGANRQAAVVSGINVHRQLIWVYA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCHHHHHHHHHHHH IAGVLSGIAGTVTAARAISGQSGMGVMYELDAIAAVVIGGTSLSGGLGRITGTVIGVLIL HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHEECCCCCCCCHHHHHHHHHHHHHH GVMASGFTFIRIDAYYQEMVKGAIIVAAVVADQYRNKKTRR HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ribose [Periplasm]; H2O [C]
Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]