| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is purR [H]
Identifier: 17545733
GI number: 17545733
Start: 1067248
End: 1068291
Strand: Reverse
Name: purR [H]
Synonym: RSc1014
Alternate gene names: 17545733
Gene position: 1068291-1067248 (Counterclockwise)
Preceding gene: 17545734
Following gene: 17545732
Centisome position: 28.75
GC content: 69.64
Gene sequence:
>1044_bases ATGGCCACTATCAAGGACGTTGCCGCATTAGCCGGGGTGTCATTCACCACCGTCTCGCATGTCATCAACAACACACGGCC GGTCAACTCGGAAACGCGCAAGCGCGTGGAAGAGGCCATCCGCGCCACGCGCTATGTACCCAGCGCCGTAGCACGCTCGC TCAAGCACCGCACCACGCGCACCATCGGCGTGCTGGTGCCGACCGCCACCAACCCCTACTTCGCCGAACTGGCGCGCGGC ATCGAAGACGTGTGCGCCGCGGCCGGCTACAGCGTCATCCTGTGCAACTCCGATGACGATCCCCGCAAGCAGCGCGACTA CCTGCGCGTGCTGATGGAGAAGCGCGTCGACGGCCTCATCGTCAGCAGCGCCGGACCGGACAACGCGCTGCTCGATGCAC TGGGCGAATCCGCGCTGCCCGTGGTGATGGTGGACCGTCCCACCGAGGGCATCCTGGCCGACCAGGTGCAGATCGACCAT GAGGAAGGCGCCTACCTGGCGACCCGGCATCTGCTCGAGCTCGGGCACCGCCGCATTGCCTGCATCAGCGGACCGTCGAC GCTGAGCGTGACCGCCGGGCGGCTGGCGGGCTTTCACCGGGCGCTGCGCGAAGCCGGCGTGCCCGAGCACGCCGCGCGCG TGGCCGAAGGCGACTTCACCAGCCCCGGCGGCTACCGCGCCGCGCGCGAACTGCTGACCACCGGCGAGACGCCCACCGCC ATCTTCGCCAGCAACGACCTGATGGGCATCGGCGCGCTGCGTGCGGCCGCCGAGCTGGGCATCGCGGTGCCGAAGGAACT GTCCATCATCGGCTTCGACGACATCGAGCTGAGCCGCTATGTCTATCCGGCGCTGTCCACGGTGGGCCAGTCGATCCGGC AACTGGGCGAGACCACGGCCTCAACCCTGCTCGAGCACCTGACCGATCACGCCGCGCGGCATCACCACGAGATCCCCGAC GCGCCGCGCCGCATCGTGCTGCCGCCGCGCCTGTCGCTGCGCGAGTCGACCGCCGAGCCCGCACGCCCCGCGCGCGCGGC CTAA
Upstream 100 bases:
>100_bases ATCACGGGCGCGGTCATCGTCGCGGCCGTGGTCATGGATACCTATCGAACCCGGACCAACCGGGTCACTACACGCCAATA AAGACACAGGGAGCTTCAAC
Downstream 100 bases:
>100_bases ACTCCAGTCAACAGAAACCGCAACCCTTTGCCCACCATGGTGGCCAAGCGTTCCGTTCTCTCCTCGGCCGCTGCCGACGT GCTGGTCGTCGGCAGCCTCA
Product: transcriptional regulator
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MATIKDVAALAGVSFTTVSHVINNTRPVNSETRKRVEEAIRATRYVPSAVARSLKHRTTRTIGVLVPTATNPYFAELARG IEDVCAAAGYSVILCNSDDDPRKQRDYLRVLMEKRVDGLIVSSAGPDNALLDALGESALPVVMVDRPTEGILADQVQIDH EEGAYLATRHLLELGHRRIACISGPSTLSVTAGRLAGFHRALREAGVPEHAARVAEGDFTSPGGYRAARELLTTGETPTA IFASNDLMGIGALRAAAELGIAVPKELSIIGFDDIELSRYVYPALSTVGQSIRQLGETTASTLLEHLTDHAARHHHEIPD APRRIVLPPRLSLRESTAEPARPARAA
Sequences:
>Translated_347_residues MATIKDVAALAGVSFTTVSHVINNTRPVNSETRKRVEEAIRATRYVPSAVARSLKHRTTRTIGVLVPTATNPYFAELARG IEDVCAAAGYSVILCNSDDDPRKQRDYLRVLMEKRVDGLIVSSAGPDNALLDALGESALPVVMVDRPTEGILADQVQIDH EEGAYLATRHLLELGHRRIACISGPSTLSVTAGRLAGFHRALREAGVPEHAARVAEGDFTSPGGYRAARELLTTGETPTA IFASNDLMGIGALRAAAELGIAVPKELSIIGFDDIELSRYVYPALSTVGQSIRQLGETTASTLLEHLTDHAARHHHEIPD APRRIVLPPRLSLRESTAEPARPARAA >Mature_346_residues ATIKDVAALAGVSFTTVSHVINNTRPVNSETRKRVEEAIRATRYVPSAVARSLKHRTTRTIGVLVPTATNPYFAELARGI EDVCAAAGYSVILCNSDDDPRKQRDYLRVLMEKRVDGLIVSSAGPDNALLDALGESALPVVMVDRPTEGILADQVQIDHE EGAYLATRHLLELGHRRIACISGPSTLSVTAGRLAGFHRALREAGVPEHAARVAEGDFTSPGGYRAARELLTTGETPTAI FASNDLMGIGALRAAAELGIAVPKELSIIGFDDIELSRYVYPALSTVGQSIRQLGETTASTLLEHLTDHAARHHHEIPDA PRRIVLPPRLSLRESTAEPARPARAA
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787948, Length=348, Percent_Identity=42.816091954023, Blast_Score=258, Evalue=6e-70, Organism=Escherichia coli, GI1790194, Length=312, Percent_Identity=41.025641025641, Blast_Score=234, Evalue=4e-63, Organism=Escherichia coli, GI1790369, Length=307, Percent_Identity=36.4820846905537, Blast_Score=207, Evalue=1e-54, Organism=Escherichia coli, GI1789202, Length=288, Percent_Identity=37.5, Blast_Score=186, Evalue=2e-48, Organism=Escherichia coli, GI1788474, Length=288, Percent_Identity=37.8472222222222, Blast_Score=174, Evalue=8e-45, Organism=Escherichia coli, GI1786540, Length=341, Percent_Identity=32.258064516129, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1789068, Length=294, Percent_Identity=31.9727891156463, Blast_Score=154, Evalue=9e-39, Organism=Escherichia coli, GI1787580, Length=309, Percent_Identity=30.42071197411, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI1787906, Length=347, Percent_Identity=28.8184438040346, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI48994940, Length=306, Percent_Identity=29.4117647058824, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1790715, Length=325, Percent_Identity=26.1538461538462, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1789456, Length=349, Percent_Identity=28.080229226361, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1786268, Length=310, Percent_Identity=24.8387096774194, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1790689, Length=341, Percent_Identity=25.5131964809384, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1790192, Length=219, Percent_Identity=26.9406392694064, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 37289; Mature: 37158
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIKDVAALAGVSFTTVSHVINNTRPVNSETRKRVEEAIRATRYVPSAVARSLKHRTTR CCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC TIGVLVPTATNPYFAELARGIEDVCAAAGYSVILCNSDDDPRKQRDYLRVLMEKRVDGLI EEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCEE VSSAGPDNALLDALGESALPVVMVDRPTEGILADQVQIDHEEGAYLATRHLLELGHRRIA EECCCCCHHHHHHCCCCCCCEEEECCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCEEE CISGPSTLSVTAGRLAGFHRALREAGVPEHAARVAEGDFTSPGGYRAARELLTTGETPTA EECCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCE IFASNDLMGIGALRAAAELGIAVPKELSIIGFDDIELSRYVYPALSTVGQSIRQLGETTA EEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH STLLEHLTDHAARHHHEIPDAPRRIVLPPRLSLRESTAEPARPARAA HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure ATIKDVAALAGVSFTTVSHVINNTRPVNSETRKRVEEAIRATRYVPSAVARSLKHRTTR CCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC TIGVLVPTATNPYFAELARGIEDVCAAAGYSVILCNSDDDPRKQRDYLRVLMEKRVDGLI EEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCEE VSSAGPDNALLDALGESALPVVMVDRPTEGILADQVQIDHEEGAYLATRHLLELGHRRIA EECCCCCHHHHHHCCCCCCCEEEECCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCEEE CISGPSTLSVTAGRLAGFHRALREAGVPEHAARVAEGDFTSPGGYRAARELLTTGETPTA EECCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCE IFASNDLMGIGALRAAAELGIAVPKELSIIGFDDIELSRYVYPALSTVGQSIRQLGETTA EEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH STLLEHLTDHAARHHHEIPDAPRRIVLPPRLSLRESTAEPARPARAA HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA