Click here to switch to the map view.

The map label for this gene is 17545535

Identifier: 17545535

GI number: 17545535

Start: 860213

End: 860467

Strand: Reverse

Name: 17545535

Synonym: RSc0816

Alternate gene names: NA

Gene position: 860467-860213 (Counterclockwise)

Preceding gene: 17545538

Following gene: 17545533

Centisome position: 23.15

GC content: 72.94

Gene sequence:

>255_bases
ATGGGTCTGCCGCTACGCAAGGACAGAGCCGCGCCGCCGCCGGCGTGCCAAGTCACCGAGGCGCTCGGATTCCTGCGCGG
GGCCAGGGCGCTGAACGTCGTCTGGCAACTGCGCGATCAGGCCCGGCGCTTCGGCGAGCTGCGCCATGACCTGCCGCGGA
TTTCGGCGCGCGTCCTGAGCCTGCGCCTGCATGCGCTCGAGTCGCGCGGACGGGTCGTGCGGCACGCGCTGGACAGTTCG
CCGCCGTCGGCCTGA

Upstream 100 bases:

>100_bases
CGCGCGGTGCATGGTAGTCGAGTCCATCGGTCTGCGGCACAGGGCCGCCGATAGTATCCGGTCACGCTGAAGTTACCGGC
TGTCGCCGAAACGAACATCC

Downstream 100 bases:

>100_bases
GCGCCGTCCAGGCAACAAAAAACCCGCGATCGCCAGGCGGCTTCGCGGGTTTTTGTTGCGGCAGGCGGCGCGCGTCAGCC
GCCGATCATCACGTTGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MGLPLRKDRAAPPPACQVTEALGFLRGARALNVVWQLRDQARRFGELRHDLPRISARVLSLRLHALESRGRVVRHALDSS
PPSA

Sequences:

>Translated_84_residues
MGLPLRKDRAAPPPACQVTEALGFLRGARALNVVWQLRDQARRFGELRHDLPRISARVLSLRLHALESRGRVVRHALDSS
PPSA
>Mature_83_residues
GLPLRKDRAAPPPACQVTEALGFLRGARALNVVWQLRDQARRFGELRHDLPRISARVLSLRLHALESRGRVVRHALDSSP
PSA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9355; Mature: 9224

Theoretical pI: Translated: 12.25; Mature: 12.25

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLPLRKDRAAPPPACQVTEALGFLRGARALNVVWQLRDQARRFGELRHDLPRISARVLS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLHALESRGRVVRHALDSSPPSA
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GLPLRKDRAAPPPACQVTEALGFLRGARALNVVWQLRDQARRFGELRHDLPRISARVLS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLHALESRGRVVRHALDSSPPSA
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA