| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is che [H]
Identifier: 17545460
GI number: 17545460
Start: 787545
End: 787949
Strand: Direct
Name: che [H]
Synonym: RSc0741
Alternate gene names: 17545460
Gene position: 787545-787949 (Clockwise)
Preceding gene: 17545458
Following gene: 161621734
Centisome position: 21.19
GC content: 59.01
Gene sequence:
>405_bases ATGGACAAGAGCCAATACCGATTCCTGGTTGTCGATGATTTCCCGACGATGCGTCGGATCATCCGTGGGCAGCTCAAGGA ACTCGGGTTCGCCAACATCGATGAGGCCGAAGACGGTACTGCTGGCCTGAGCAAGATCAAGGAGAGCCGGTTCGATTTCG TGATTTCGGACTGGAACATGCCCAAGATGGATGGCCTGCAGATGCTGCAGGCCATTCGCGCCGACCCCAACCCGGGCATC AGCAAGCTGCCCGTGCTGATCGTGACGGCCGAGGCCAAGAAGGAAAACGTCATTGCCGCCGCCCAGGCCGGTGCCAGCGG CTACGTGGTCAAGCCGTTCACCGCGGCCACGCTGGGCGAAAAACTGAACAAGATTTTCGAGAAGTTCGAAAGAGCGGAGG CCTGA
Upstream 100 bases:
>100_bases CTTTGCGTATAAGTGACTTATCGTGCTCAAGAAATGTTGCGGGCGGCCGATGTCACTGCTTTCCTATTTCCAATTCGGAC AGTTTGCGGAGAGTGCATCC
Downstream 100 bases:
>100_bases TGAGCGAAATGCACGATGGCAGCCCCGTCCAGGCTGACAGGGCTGCCGCGGATGCCGAACCCTTGCCCGACATGCTGCAG CGGATCGGGTATCTGACCCG
Product: chemotaxis response regulator transcription regulator protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MDKSQYRFLVVDDFPTMRRIIRGQLKELGFANIDEAEDGTAGLSKIKESRFDFVISDWNMPKMDGLQMLQAIRADPNPGI SKLPVLIVTAEAKKENVIAAAQAGASGYVVKPFTAATLGEKLNKIFEKFERAEA
Sequences:
>Translated_134_residues MDKSQYRFLVVDDFPTMRRIIRGQLKELGFANIDEAEDGTAGLSKIKESRFDFVISDWNMPKMDGLQMLQAIRADPNPGI SKLPVLIVTAEAKKENVIAAAQAGASGYVVKPFTAATLGEKLNKIFEKFERAEA >Mature_134_residues MDKSQYRFLVVDDFPTMRRIIRGQLKELGFANIDEAEDGTAGLSKIKESRFDFVISDWNMPKMDGLQMLQAIRADPNPGI SKLPVLIVTAEAKKENVIAAAQAGASGYVVKPFTAATLGEKLNKIFEKFERAEA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. In its active (phosphorylated or acetylated) form, CheY exhibits enhanced binding to a switch component, FliM, at the flagellar motor which induces a change f
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=129, Percent_Identity=69.7674418604651, Blast_Score=182, Evalue=6e-48, Organism=Escherichia coli, GI145693157, Length=131, Percent_Identity=34.3511450381679, Blast_Score=70, Evalue=6e-14, Organism=Escherichia coli, GI1790437, Length=124, Percent_Identity=35.4838709677419, Blast_Score=69, Evalue=1e-13, Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=33.6448598130841, Blast_Score=63, Evalue=6e-12, Organism=Escherichia coli, GI1788713, Length=119, Percent_Identity=32.7731092436975, Blast_Score=63, Evalue=7e-12, Organism=Escherichia coli, GI1786599, Length=123, Percent_Identity=26.0162601626016, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI1788521, Length=131, Percent_Identity=33.587786259542, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1788905, Length=128, Percent_Identity=30.46875, Blast_Score=60, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 14851; Mature: 14851
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKSQYRFLVVDDFPTMRRIIRGQLKELGFANIDEAEDGTAGLSKIKESRFDFVISDWNM CCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCC PKMDGLQMLQAIRADPNPGISKLPVLIVTAEAKKENVIAAAQAGASGYVVKPFTAATLGE CCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEECCHHHHHHHH KLNKIFEKFERAEA HHHHHHHHHHHCCC >Mature Secondary Structure MDKSQYRFLVVDDFPTMRRIIRGQLKELGFANIDEAEDGTAGLSKIKESRFDFVISDWNM CCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCC PKMDGLQMLQAIRADPNPGISKLPVLIVTAEAKKENVIAAAQAGASGYVVKPFTAATLGE CCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEECCHHHHHHHH KLNKIFEKFERAEA HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]