| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is yeeE [C]
Identifier: 17545458
GI number: 17545458
Start: 785213
End: 786328
Strand: Direct
Name: yeeE [C]
Synonym: RSc0739
Alternate gene names: 17545458
Gene position: 785213-786328 (Clockwise)
Preceding gene: 17545457
Following gene: 17545460
Centisome position: 21.13
GC content: 68.37
Gene sequence:
>1116_bases ATGCCAGACATTGATCTTCACGCGCTGTCCCGCACCGTGCTGTGGGCGACGTTCGCCCTGACGTTTCTGTTCGGCGCGAT CCTGCAGCGCACGCATTTCTGCACGATGGGCGCGGTGTCCGACGCGGTCAACATCGGCGATTGGAGCCGGCTGCGGATGT GGGCGCTGGCTATCGGCGTGGCGATGATCGGCACGGGCATCCTCGGCTGGGCGGGGTGGATCGATCCGGCCAAGACGATC TATGCGGCCGGCCGGCTGCAGTGGCTGTCGGCGCTGGTCGGCGGGCTGATGTTCGGCTTCGGCATGGTGCTGGGCTCGGG GTGCGGCAGCAAGACGCTGGTGCGCATCGGCGGGGGCAATCTGAAGTCGGTGGTGGTGTTCGTGTTCCTCGGGCTGTCGG CGTACATGACGCTCAAGGGCGTGTTCGGCGTGGTGCGCGTCGCGACCGTCGATGCCGTGGCGATCGCGCTGCCGACGACG CAGGATCTGCCGAGCGTGCTGGGGCATGCGCTGTCGGCGGACGTGCGCATGTTGCGCCTGGCGCTCGCACTGGCGATCGG CGGGGCGCTGGCGGTGTGGGCGCTCGCCGGCCGCGATTTCCGTACGCCGGACAATCTGCTGGGCGGCATCGGCGTCGGGC TCGTCATCGTGGCCATGTGGTATGTGTCCGGCCATCTCGGCTATGTCGCGGAAGATCCGGACACGCTGCAGGAGGCCTTC GTCGCGACCAACAGCGGCCGGATGGAGGCGCTGAGCTTCGTGGCGCCCGTGTCGTATACGCTGGAATGGCTGATGTTCTT CAGCGATACGTCCAAGGTGCTGACGGTCGGCATCGTCAGCGTGCTTGGCGTGATCGCCGGCTCGGCCGCGGTGGCGCTGG CCAGCGGCACGTTCCGCTGGGAGGGCTTCGCCAATGCGGAGGACACCGGCAACCATATCGTGGGCGGTATCCTGATGGGC GCGGGCGGCGTGACGGCGCTGGGCTGCACGATCGGGCAGGGGCTGTCGGGCGTGTCGACGCTGGCGATCGGTTCGTTCGT CGCGTTGGCGGGTATCCTGGCGGGCGCGGTGCTGGCGTTCCGCTACCAGATGTGGCGGCTGGAGCGTGGTGGTTAG
Upstream 100 bases:
>100_bases GTGCGGCGTCTGCGATTCGTGCCGCATCCGCCGTGCCGGCTTCGAGGCGGCGGCGGTGCCGGACCCGACGCGCTATCGCT GATCCCGGGAGTGCTATCCG
Downstream 100 bases:
>100_bases GCCGGTTTCGCTGGCCTGAAATTTGACAGCCGAACGAAAGTGTTCTTATAATCGCAGGCTTCGGGTCGTTAGCTCAGTCG GTAGAGCAGCGGACTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: YeeE/YedE; Transmembrane Protein; YeeE/YedE Domain Protein; YeeE/YedE Family Membrane Protein; SoxT Protein YeeE/YedE Family Protein; YeeE/YedE Domain-Containing Protein; Transporter Component
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MPDIDLHALSRTVLWATFALTFLFGAILQRTHFCTMGAVSDAVNIGDWSRLRMWALAIGVAMIGTGILGWAGWIDPAKTI YAAGRLQWLSALVGGLMFGFGMVLGSGCGSKTLVRIGGGNLKSVVVFVFLGLSAYMTLKGVFGVVRVATVDAVAIALPTT QDLPSVLGHALSADVRMLRLALALAIGGALAVWALAGRDFRTPDNLLGGIGVGLVIVAMWYVSGHLGYVAEDPDTLQEAF VATNSGRMEALSFVAPVSYTLEWLMFFSDTSKVLTVGIVSVLGVIAGSAAVALASGTFRWEGFANAEDTGNHIVGGILMG AGGVTALGCTIGQGLSGVSTLAIGSFVALAGILAGAVLAFRYQMWRLERGG
Sequences:
>Translated_371_residues MPDIDLHALSRTVLWATFALTFLFGAILQRTHFCTMGAVSDAVNIGDWSRLRMWALAIGVAMIGTGILGWAGWIDPAKTI YAAGRLQWLSALVGGLMFGFGMVLGSGCGSKTLVRIGGGNLKSVVVFVFLGLSAYMTLKGVFGVVRVATVDAVAIALPTT QDLPSVLGHALSADVRMLRLALALAIGGALAVWALAGRDFRTPDNLLGGIGVGLVIVAMWYVSGHLGYVAEDPDTLQEAF VATNSGRMEALSFVAPVSYTLEWLMFFSDTSKVLTVGIVSVLGVIAGSAAVALASGTFRWEGFANAEDTGNHIVGGILMG AGGVTALGCTIGQGLSGVSTLAIGSFVALAGILAGAVLAFRYQMWRLERGG >Mature_370_residues PDIDLHALSRTVLWATFALTFLFGAILQRTHFCTMGAVSDAVNIGDWSRLRMWALAIGVAMIGTGILGWAGWIDPAKTIY AAGRLQWLSALVGGLMFGFGMVLGSGCGSKTLVRIGGGNLKSVVVFVFLGLSAYMTLKGVFGVVRVATVDAVAIALPTTQ DLPSVLGHALSADVRMLRLALALAIGGALAVWALAGRDFRTPDNLLGGIGVGLVIVAMWYVSGHLGYVAEDPDTLQEAFV ATNSGRMEALSFVAPVSYTLEWLMFFSDTSKVLTVGIVSVLGVIAGSAAVALASGTFRWEGFANAEDTGNHIVGGILMGA GGVTALGCTIGQGLSGVSTLAIGSFVALAGILAGAVLAFRYQMWRLERGG
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788323, Length=323, Percent_Identity=27.2445820433437, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38493; Mature: 38361
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDIDLHALSRTVLWATFALTFLFGAILQRTHFCTMGAVSDAVNIGDWSRLRMWALAIGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AMIGTGILGWAGWIDPAKTIYAAGRLQWLSALVGGLMFGFGMVLGSGCGSKTLVRIGGGN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC LKSVVVFVFLGLSAYMTLKGVFGVVRVATVDAVAIALPTTQDLPSVLGHALSADVRMLRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHH ALALAIGGALAVWALAGRDFRTPDNLLGGIGVGLVIVAMWYVSGHLGYVAEDPDTLQEAF HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHH VATNSGRMEALSFVAPVSYTLEWLMFFSDTSKVLTVGIVSVLGVIAGSAAVALASGTFRW HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHEECCCEEE EGFANAEDTGNHIVGGILMGAGGVTALGCTIGQGLSGVSTLAIGSFVALAGILAGAVLAF CCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RYQMWRLERGG HHHHHHHCCCC >Mature Secondary Structure PDIDLHALSRTVLWATFALTFLFGAILQRTHFCTMGAVSDAVNIGDWSRLRMWALAIGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AMIGTGILGWAGWIDPAKTIYAAGRLQWLSALVGGLMFGFGMVLGSGCGSKTLVRIGGGN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC LKSVVVFVFLGLSAYMTLKGVFGVVRVATVDAVAIALPTTQDLPSVLGHALSADVRMLRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHH ALALAIGGALAVWALAGRDFRTPDNLLGGIGVGLVIVAMWYVSGHLGYVAEDPDTLQEAF HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHH VATNSGRMEALSFVAPVSYTLEWLMFFSDTSKVLTVGIVSVLGVIAGSAAVALASGTFRW HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHEECCCEEE EGFANAEDTGNHIVGGILMGAGGVTALGCTIGQGLSGVSTLAIGSFVALAGILAGAVLAF CCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RYQMWRLERGG HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA