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The map label for this gene is ybgF [C]

Identifier: 17545456

GI number: 17545456

Start: 783533

End: 784357

Strand: Direct

Name: ybgF [C]

Synonym: RSc0737

Alternate gene names: 17545456

Gene position: 783533-784357 (Clockwise)

Preceding gene: 17545455

Following gene: 17545457

Centisome position: 21.08

GC content: 64.36

Gene sequence:

>825_bases
ATGCGCCGGCTGCGTTCGCGCGGCCGGCGTTCTTACGTTGGTAGCAAAGACATGAACACGATGACGAAACAGCGCGTCTT
CCAGGCCATCCTGACAGCGACGCTTGTCGCGGGTGGAGCATTGACCATGGCCGGCCCGGCGGCAGCGGGGGTGTTTGACG
ACGATGAGGCGCGCCGCGCCATCATCGACATGCGCGACAAATTCAACAATTTCCAGTCGAGCGCCGCACAGCGCATCGAC
CAGAACAGCCGCAACCAGATCGACGCGCAGAACCAGATCGAGACACTGAAGTCCGAGGTCGCCCGGCTGCGCGGCCAGAA
CGAGCAGCTGCAGAACGAGGTCGATACGCTGGCCAGGCAGCAGAAGGACTACTACGCCGATCTCGATGCGCGGCTCAAGA
AATTCGAGCCGCAGCAGGCCACGGTGGATGGCCGTGAAGGTATGGTGCAACCGGGCGAGAAGACAGAGTACGACGCCGCG
CTGAAGACGTTCCAGAGCGGCGACTTCAAGGGCGCGGGCAATCAGTTCTCGGCGTTCGTGAAGAAGTATCCGCAGAGCCC
GTACCTGCCGCTGGCGCAGTTCTGGCTGGGCAATGCGCTCTATGCCCAGCGCGACTACAAGGGCTCGACCTACGTGCTGG
AGAACATGGCGCGCGCCAACCCGCAGCACCCGAAGGCGCCGGAGGCGCTGCTGCAGGTCGCGACCAACCAGGGCGAGTCG
GGCCAGAAGGCCGCGGCGCGCAAGACGCTGGAGACGGTGATCGCGGAGTATCCCGGCACCGAGCAGGCCAAGACCGCAAC
GAGCCGGTTGAAGACGATGCGCTGA

Upstream 100 bases:

>100_bases
CCTGGGCAAGGAAAAGCCGCAGGCCTCGGGCCACGACGAGGAGTCGTGGGCACAGAACCGCCGCTCCGATATCGTCTACT
GATCGGCGCGGGGCAAGTGG

Downstream 100 bases:

>100_bases
CCGGACGTTTCCGGTTGCCGCGACGCCCGCCCGTGTCTGCACCGGCGGGCGTTTTTCATGGCGCGGCCGGAATGCCCGTC
ATGGCCGGCAGTCGGAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRRLRSRGRRSYVGSKDMNTMTKQRVFQAILTATLVAGGALTMAGPAAAGVFDDDEARRAIIDMRDKFNNFQSSAAQRID
QNSRNQIDAQNQIETLKSEVARLRGQNEQLQNEVDTLARQQKDYYADLDARLKKFEPQQATVDGREGMVQPGEKTEYDAA
LKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGSTYVLENMARANPQHPKAPEALLQVATNQGES
GQKAAARKTLETVIAEYPGTEQAKTATSRLKTMR

Sequences:

>Translated_274_residues
MRRLRSRGRRSYVGSKDMNTMTKQRVFQAILTATLVAGGALTMAGPAAAGVFDDDEARRAIIDMRDKFNNFQSSAAQRID
QNSRNQIDAQNQIETLKSEVARLRGQNEQLQNEVDTLARQQKDYYADLDARLKKFEPQQATVDGREGMVQPGEKTEYDAA
LKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGSTYVLENMARANPQHPKAPEALLQVATNQGES
GQKAAARKTLETVIAEYPGTEQAKTATSRLKTMR
>Mature_274_residues
MRRLRSRGRRSYVGSKDMNTMTKQRVFQAILTATLVAGGALTMAGPAAAGVFDDDEARRAIIDMRDKFNNFQSSAAQRID
QNSRNQIDAQNQIETLKSEVARLRGQNEQLQNEVDTLARQQKDYYADLDARLKKFEPQQATVDGREGMVQPGEKTEYDAA
LKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGSTYVLENMARANPQHPKAPEALLQVATNQGES
GQKAAARKTLETVIAEYPGTEQAKTATSRLKTMR

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybgF [H]

Homologues:

Organism=Escherichia coli, GI1786963, Length=197, Percent_Identity=28.4263959390863, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30585; Mature: 30585

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLRSRGRRSYVGSKDMNTMTKQRVFQAILTATLVAGGALTMAGPAAAGVFDDDEARRA
CCHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHCCCCCCHHHHHH
IIDMRDKFNNFQSSAAQRIDQNSRNQIDAQNQIETLKSEVARLRGQNEQLQNEVDTLARQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
QKDYYADLDARLKKFEPQQATVDGREGMVQPGEKTEYDAALKTFQSGDFKGAGNQFSAFV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH
KKYPQSPYLPLAQFWLGNALYAQRDYKGSTYVLENMARANPQHPKAPEALLQVATNQGES
HHCCCCCCCHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
GQKAAARKTLETVIAEYPGTEQAKTATSRLKTMR
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure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CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]