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The map label for this gene is rfaC1 [H]

Identifier: 17545411

GI number: 17545411

Start: 740615

End: 741613

Strand: Direct

Name: rfaC1 [H]

Synonym: RSc0692

Alternate gene names: 17545411

Gene position: 740615-741613 (Clockwise)

Preceding gene: 17545410

Following gene: 17545412

Centisome position: 19.93

GC content: 71.67

Gene sequence:

>999_bases
ATGCGGGTGCTGATCGTCAAGGTGTCGTCGCTTGGCGATGTGGTGCACTGCACGCCGGTGGTGGCGGACATCCTGCGCGC
GCATCCTGGCGCCGAGATCGACTGGGTTGTCGAGGAAGGGTTCGCGGGCATCGTGCGCATCGTGCGCGGGGTGCAGGACG
TGATCCCGTTTGCGCTGCGGCGCTGGCGCAAGTCGCTGGCGTCCGGCGCGACTTGGGGCGAGATGGCGGCATTCCGCCGG
GCCCTGCGCGCCAAGCCGTACGACGTGGTGCTCGACACGCAGGGCCTGATCAAGACCGCGCTGGTCGCCGCGCAGGCCCG
CCTGGCGCCGAACGGGTTTGTCGCCGGGCTGGGCAATCGCACCGACGGCGCAGGCTACGAGCCGCTGGCTCGGCTGTTCT
ACCAGCGCGAGGTCCACATGGAGCCGCGCGTGCACGTGGTCGAGCGCTCGCGCCGCATGGTGGCTGAGGCTCTCGGCTAC
GCCGTCCCCGAGACGATCGACTTCGGCCTGCAGCCGCCGGCCAGCCTGCCGTTCGCGCTGCCGCGCCCATATGTGGCGCT
GGTGCATGCCACCTCGCGCGCCGACAAGGGCTGGCCGCAGGACGCCTGGGTCGATGTCGCCCGCGCGCTGCTGGCCCGCG
ATTACGCCCTGGCGCTGCCCTGGGGCAGCGAAACCGAGCGCCGCACCAGCGAGGCCATCCGCGAAGCCATCGTGGCCGCG
GTACCGGGCACACTCGGGCGGATCGTGATCCCGCCGCGCATGTCGCTGCCCGACGTGACCGCCTTCCTCGACCAGTCGAC
CGCGGTGGTCGGGGTCGACACCGGCCTGGTGCACATCGCCGCGGCGATGTGCAAGCCGACCGTGGCGCTCTACAACTTTT
CCACGTCGTGGCGCACCGGCGGCTACTGGACGCCCAAGGTCCACGACCTCGGCTGCGCCGAGGCCCATCCGACCAGCGCG
CAGGCGCTCGATGCGCTGCGCGCGCTGGGTGTGCTCTGA

Upstream 100 bases:

>100_bases
AGGGCGAATTCCGCCGCGTGATCCTGGCCGAGAAGCCGGACGCGAAGCTGCCGTTCTGATCCGCATTGCCGATGCAGATT
CGCGGGAAAGGGATGGCGGC

Downstream 100 bases:

>100_bases
TGCTGCGCATTGCCTATCGCCTGCTGTGGCGTGCGCTGCTGCCGTTTGCGCTGCTGCGCCTGTGGTGGCGCGGCCGCAAG
GAACCCGGCTATCGCCAGCA

Product: lipopolysaccharide heptosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MRVLIVKVSSLGDVVHCTPVVADILRAHPGAEIDWVVEEGFAGIVRIVRGVQDVIPFALRRWRKSLASGATWGEMAAFRR
ALRAKPYDVVLDTQGLIKTALVAAQARLAPNGFVAGLGNRTDGAGYEPLARLFYQREVHMEPRVHVVERSRRMVAEALGY
AVPETIDFGLQPPASLPFALPRPYVALVHATSRADKGWPQDAWVDVARALLARDYALALPWGSETERRTSEAIREAIVAA
VPGTLGRIVIPPRMSLPDVTAFLDQSTAVVGVDTGLVHIAAAMCKPTVALYNFSTSWRTGGYWTPKVHDLGCAEAHPTSA
QALDALRALGVL

Sequences:

>Translated_332_residues
MRVLIVKVSSLGDVVHCTPVVADILRAHPGAEIDWVVEEGFAGIVRIVRGVQDVIPFALRRWRKSLASGATWGEMAAFRR
ALRAKPYDVVLDTQGLIKTALVAAQARLAPNGFVAGLGNRTDGAGYEPLARLFYQREVHMEPRVHVVERSRRMVAEALGY
AVPETIDFGLQPPASLPFALPRPYVALVHATSRADKGWPQDAWVDVARALLARDYALALPWGSETERRTSEAIREAIVAA
VPGTLGRIVIPPRMSLPDVTAFLDQSTAVVGVDTGLVHIAAAMCKPTVALYNFSTSWRTGGYWTPKVHDLGCAEAHPTSA
QALDALRALGVL
>Mature_332_residues
MRVLIVKVSSLGDVVHCTPVVADILRAHPGAEIDWVVEEGFAGIVRIVRGVQDVIPFALRRWRKSLASGATWGEMAAFRR
ALRAKPYDVVLDTQGLIKTALVAAQARLAPNGFVAGLGNRTDGAGYEPLARLFYQREVHMEPRVHVVERSRRMVAEALGY
AVPETIDFGLQPPASLPFALPRPYVALVHATSRADKGWPQDAWVDVARALLARDYALALPWGSETERRTSEAIREAIVAA
VPGTLGRIVIPPRMSLPDVTAFLDQSTAVVGVDTGLVHIAAAMCKPTVALYNFSTSWRTGGYWTPKVHDLGCAEAHPTSA
QALDALRALGVL

Specific function: Heptose transfer to the lipopolysaccharide core. It transfers the innnermost heptose to [4'-P](3-deoxy-D-manno- octulosonic acid)2-IVA [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790051, Length=305, Percent_Identity=40.327868852459, Blast_Score=199, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011908 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 35963; Mature: 35963

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLIVKVSSLGDVVHCTPVVADILRAHPGAEIDWVVEEGFAGIVRIVRGVQDVIPFALR
CEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RWRKSLASGATWGEMAAFRRALRAKPYDVVLDTQGLIKTALVAAQARLAPNGFVAGLGNR
HHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEECCCC
TDGAGYEPLARLFYQREVHMEPRVHVVERSRRMVAEALGYAVPETIDFGLQPPASLPFAL
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCC
PRPYVALVHATSRADKGWPQDAWVDVARALLARDYALALPWGSETERRTSEAIREAIVAA
CCCEEEEEEEHHCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHH
VPGTLGRIVIPPRMSLPDVTAFLDQSTAVVGVDTGLVHIAAAMCKPTVALYNFSTSWRTG
CCCCCCEEEECCCCCCCHHHHHHCCCCEEEEECHHHHHHHHHHHCCEEEEEECCCCCCCC
GYWTPKVHDLGCAEAHPTSAQALDALRALGVL
CEECCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVLIVKVSSLGDVVHCTPVVADILRAHPGAEIDWVVEEGFAGIVRIVRGVQDVIPFALR
CEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RWRKSLASGATWGEMAAFRRALRAKPYDVVLDTQGLIKTALVAAQARLAPNGFVAGLGNR
HHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEECCCC
TDGAGYEPLARLFYQREVHMEPRVHVVERSRRMVAEALGYAVPETIDFGLQPPASLPFAL
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCC
PRPYVALVHATSRADKGWPQDAWVDVARALLARDYALALPWGSETERRTSEAIREAIVAA
CCCEEEEEEEHHCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHH
VPGTLGRIVIPPRMSLPDVTAFLDQSTAVVGVDTGLVHIAAAMCKPTVALYNFSTSWRTG
CCCCCCEEEECCCCCCCHHHHHHCCCCEEEEECHHHHHHHHHHHCCEEEEEECCCCCCCC
GYWTPKVHDLGCAEAHPTSAQALDALRALGVL
CEECCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478319; 8041620; 9278503; 1624462 [H]