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The map label for this gene is kdtA [H]

Identifier: 17545412

GI number: 17545412

Start: 741613

End: 742929

Strand: Direct

Name: kdtA [H]

Synonym: RSc0693

Alternate gene names: 17545412

Gene position: 741613-742929 (Clockwise)

Preceding gene: 17545411

Following gene: 17545413

Centisome position: 19.96

GC content: 70.92

Gene sequence:

>1317_bases
ATGCTGCGCATTGCCTATCGCCTGCTGTGGCGTGCGCTGCTGCCGTTTGCGCTGCTGCGCCTGTGGTGGCGCGGCCGCAA
GGAACCCGGCTATCGCCAGCACGTGGGCGAGCGGCTGGGCTTCTATCGGCCGCGCGCCAATCCCGATCACCCGCTGCTGT
GGGTGCATGCGGTGTCGGTCGGCGAGACGCGCGCGGCGCAGCCGCTGATCGATGCGCTGCTGGCGCGCTTCCCGCAGCAC
GACGTGCTGCTGACCCACATGACACCGACCGGCCGCCGCACGGGTGCCGAATTCGCGGCACAGCGCAACGGCCGCGTGAT
CCAGGCCTATCTGCCCTACGATCTGGCGGGTGCCGTCGACCGCTTCCTCCGCCATTTCCAGCCGCGCCTCGGCCTGCTGA
TGGAGACCGAGATCTGGCCGGTGCTGATCGAACGTGCCCACCATGCCGGCGTGCCGATGGTGCTGGTCAATGGGCGGCTG
TCCGAGCGCAGTCATCGGCGCACCGCACGGCTGGGCCAGGCCGCGCGCGAGACCTATGCGCAGCTCGCCGCGGTGCTCGC
CCAGACCCCGGACGACGCCGACCGCTATCGTTCGCTCGGCGTGCCGCGCGTGCGCGTGACCGGCAACCTGAAGTTCGATA
TCACGCCGCATGTCGACCAGATCATGATGGGCCGTGCGTTGCGCGATGCGTTGGGCGGGCGCGCCGTCTGGGTGGCCGCC
AGCACGCGCGAAGGCGAGGAGCCCCTGCTGCTCGATGCGTGGCATGCGCATCGCGCGCAGCATGCGGGCCGCCGGCATCC
GCTGCTGATCCTGGTGCCGCGCCATCCCCAGCGCTTTGACGAAGTGGCGCAGCTCGCGGGGCTCAAGGGCTTGCGCGTCG
CGCGTCGCAGTGCCCTGTCGCTGTCGGCGGCCGAAGCGCCCGATGCGGCCGGTGTGCTGGATGCGGACATCCTGCTGGGC
GATTCGATGGGCGAAATGGCGCTGTACTATGCCGCCGCACAGGCCGCATTCATCGGCGGCAGCCTGCTGCCGATGGGCGG
ACAGAACCTGATCGAGGCCTGTGCGGTCGGGACCCCCGTCGTGATCGGTCCGCATACCTTCAATTTCGCGCAGGCCACGC
GCGATGCCGTGGCGGCGGGCGCATGCGTGCAGGTGGAGGATGCCGCCTGCGCCGTGCGCGTGATCGACCAGTGGCTGTCC
GATGCCGATGCGCGCGAGGCCGCATCGCGTGCCGCGCTGGCATTCGCCGCGACCCACGGCGGCGCCACGGCACGCACGGT
GGAGGCGGTGGCGTCGCTGGTGCTGCCGTCGCTCTAG

Upstream 100 bases:

>100_bases
GCGGCTACTGGACGCCCAAGGTCCACGACCTCGGCTGCGCCGAGGCCCATCCGACCAGCGCGCAGGCGCTCGATGCGCTG
CGCGCGCTGGGTGTGCTCTG

Downstream 100 bases:

>100_bases
GCGGCGGGCGCAGGCGCGCGTGCCGCCGCGTGGCATGCGCGCCTGCGAACTCAACGCGCGCGCGGCAGACTAACCGGGTT
TCGCGCAGTCCGCTTTCTGC

Product: 3-deoxy-D-manno-octulosonic-acid transferase

Products: NA

Alternate protein names: KDO transferase [H]

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MLRIAYRLLWRALLPFALLRLWWRGRKEPGYRQHVGERLGFYRPRANPDHPLLWVHAVSVGETRAAQPLIDALLARFPQH
DVLLTHMTPTGRRTGAEFAAQRNGRVIQAYLPYDLAGAVDRFLRHFQPRLGLLMETEIWPVLIERAHHAGVPMVLVNGRL
SERSHRRTARLGQAARETYAQLAAVLAQTPDDADRYRSLGVPRVRVTGNLKFDITPHVDQIMMGRALRDALGGRAVWVAA
STREGEEPLLLDAWHAHRAQHAGRRHPLLILVPRHPQRFDEVAQLAGLKGLRVARRSALSLSAAEAPDAAGVLDADILLG
DSMGEMALYYAAAQAAFIGGSLLPMGGQNLIEACAVGTPVVIGPHTFNFAQATRDAVAAGACVQVEDAACAVRVIDQWLS
DADAREAASRAALAFAATHGGATARTVEAVASLVLPSL

Sequences:

>Translated_438_residues
MLRIAYRLLWRALLPFALLRLWWRGRKEPGYRQHVGERLGFYRPRANPDHPLLWVHAVSVGETRAAQPLIDALLARFPQH
DVLLTHMTPTGRRTGAEFAAQRNGRVIQAYLPYDLAGAVDRFLRHFQPRLGLLMETEIWPVLIERAHHAGVPMVLVNGRL
SERSHRRTARLGQAARETYAQLAAVLAQTPDDADRYRSLGVPRVRVTGNLKFDITPHVDQIMMGRALRDALGGRAVWVAA
STREGEEPLLLDAWHAHRAQHAGRRHPLLILVPRHPQRFDEVAQLAGLKGLRVARRSALSLSAAEAPDAAGVLDADILLG
DSMGEMALYYAAAQAAFIGGSLLPMGGQNLIEACAVGTPVVIGPHTFNFAQATRDAVAAGACVQVEDAACAVRVIDQWLS
DADAREAASRAALAFAATHGGATARTVEAVASLVLPSL
>Mature_438_residues
MLRIAYRLLWRALLPFALLRLWWRGRKEPGYRQHVGERLGFYRPRANPDHPLLWVHAVSVGETRAAQPLIDALLARFPQH
DVLLTHMTPTGRRTGAEFAAQRNGRVIQAYLPYDLAGAVDRFLRHFQPRLGLLMETEIWPVLIERAHHAGVPMVLVNGRL
SERSHRRTARLGQAARETYAQLAAVLAQTPDDADRYRSLGVPRVRVTGNLKFDITPHVDQIMMGRALRDALGGRAVWVAA
STREGEEPLLLDAWHAHRAQHAGRRHPLLILVPRHPQRFDEVAQLAGLKGLRVARRSALSLSAAEAPDAAGVLDADILLG
DSMGEMALYYAAAQAAFIGGSLLPMGGQNLIEACAVGTPVVIGPHTFNFAQATRDAVAAGACVQVEDAACAVRVIDQWLS
DADAREAASRAALAFAATHGGATARTVEAVASLVLPSL

Specific function: Essential step in lipopolysaccharides biosynthesis. Acts at transfer of 3-deoxy-D-mono octulonic acid (KDO) from CMP-KDO to a tetraacyldisaccharide 1,4'-bisphosphate precursor of lipid A (lipid IVA). Transfers two molecules of KDO to lipid IVA [H]

COG id: COG1519

COG function: function code M; 3-deoxy-D-manno-octulosonic-acid transferase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1790064, Length=447, Percent_Identity=39.3736017897092, Blast_Score=277, Evalue=9e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR007507 [H]

Pfam domain/function: PF00534 Glycos_transf_1; PF04413 Glycos_transf_N [H]

EC number: 2.-.-.-

Molecular weight: Translated: 47802; Mature: 47802

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIAYRLLWRALLPFALLRLWWRGRKEPGYRQHVGERLGFYRPRANPDHPLLWVHAVSV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEC
GETRAAQPLIDALLARFPQHDVLLTHMTPTGRRTGAEFAAQRNGRVIQAYLPYDLAGAVD
CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHH
RFLRHFQPRLGLLMETEIWPVLIERAHHAGVPMVLVNGRLSERSHRRTARLGQAARETYA
HHHHHHCHHHCEEEECHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
QLAAVLAQTPDDADRYRSLGVPRVRVTGNLKFDITPHVDQIMMGRALRDALGGRAVWVAA
HHHHHHHCCCCHHHHHHHCCCCEEEEEECEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
STREGEEPLLLDAWHAHRAQHAGRRHPLLILVPRHPQRFDEVAQLAGLKGLRVARRSALS
CCCCCCCCEEEEHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHH
LSAAEAPDAAGVLDADILLGDSMGEMALYYAAAQAAFIGGSLLPMGGQNLIEACAVGTPV
CCCCCCCCCCCCEEHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCE
VIGPHTFNFAQATRDAVAAGACVQVEDAACAVRVIDQWLSDADAREAASRAALAFAATHG
EECCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCC
GATARTVEAVASLVLPSL
CCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRIAYRLLWRALLPFALLRLWWRGRKEPGYRQHVGERLGFYRPRANPDHPLLWVHAVSV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEC
GETRAAQPLIDALLARFPQHDVLLTHMTPTGRRTGAEFAAQRNGRVIQAYLPYDLAGAVD
CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHH
RFLRHFQPRLGLLMETEIWPVLIERAHHAGVPMVLVNGRLSERSHRRTARLGQAARETYA
HHHHHHCHHHCEEEECHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
QLAAVLAQTPDDADRYRSLGVPRVRVTGNLKFDITPHVDQIMMGRALRDALGGRAVWVAA
HHHHHHHCCCCHHHHHHHCCCCEEEEEECEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
STREGEEPLLLDAWHAHRAQHAGRRHPLLILVPRHPQRFDEVAQLAGLKGLRVARRSALS
CCCCCCCCEEEEHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHH
LSAAEAPDAAGVLDADILLGDSMGEMALYYAAAQAAFIGGSLLPMGGQNLIEACAVGTPV
CCCCCCCCCCCCEEHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCE
VIGPHTFNFAQATRDAVAAGACVQVEDAACAVRVIDQWLSDADAREAASRAALAFAATHG
EECCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCC
GATARTVEAVASLVLPSL
CCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]