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The map label for this gene is lemA [H]

Identifier: 17545383

GI number: 17545383

Start: 708983

End: 709582

Strand: Reverse

Name: lemA [H]

Synonym: RSc0664

Alternate gene names: 17545383

Gene position: 709582-708983 (Counterclockwise)

Preceding gene: 17545385

Following gene: 17545382

Centisome position: 19.09

GC content: 66.17

Gene sequence:

>600_bases
ATGCGTTTCTCCGTGCTGCGCTGGCTGTCCCTGGCGCTGGCGGTGCTGGCCGCGCCGTTCCTGTCCGCATGCGGCTACAA
CGATTTCCAGGCCAAGGACGAGGCCACCAAGGCCGCGTGGGCCGAGGTGGTCAACCAGTACCAGCGCCGCGCCGACCTGA
TCCCCAACCTGGTCAACACCGTCAAGGGCTATGCCTCGCATGAGCGCGAGACACTGGAAGCCGTGACGCGCGCGCGCGCC
GCCGCCACCAGCATCCAGGTCACACCCGAGACGCTCAAGGACCCGGCCGCGTTCCAGAAATTCCAGCAGGCCCAGGGCGA
GCTTTCCAGCGCGCTGTCGCGGCTGATGGCGGTGTCGGAGAACTATCCGCAGCTCAAGGCCGATGCGTCGTTCCGCGACC
TGCAATCGCAGCTGGAGGGCACCGAGAACCGCATCACCGTGGCGCGCCAGCGCTATATCCGCGCGGTGCAGGACTACAAC
GTGCTGGCCCGCAGCTTCCCGACCAACCTGACGGCCAAGGCGATGGGCTACGAGGTCAAACCCAGCTTCACGGTAGAGAA
CGAGAAGGGCATCTCGACCGCGCCGGCAGTAAAGTTCTGA

Upstream 100 bases:

>100_bases
CTGGCATTTCCGACGGAACACCGTGAGACGATGTCGGTCTCATGCCACACCGATTGTCCGATCCGAGGTATCCATGACTT
CTGCCCCGAGCTTGCGTCCG

Downstream 100 bases:

>100_bases
GCGCCTGAAGCCATGTCGCTCCGCATGCGCGCCCTGCTGACAAGCCTCGTGACGATGGCGCTGTGGCTGGCCGCCTGGCC
CGCGCATGCGCAGGCCGACC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRFSVLRWLSLALAVLAAPFLSACGYNDFQAKDEATKAAWAEVVNQYQRRADLIPNLVNTVKGYASHERETLEAVTRARA
AATSIQVTPETLKDPAAFQKFQQAQGELSSALSRLMAVSENYPQLKADASFRDLQSQLEGTENRITVARQRYIRAVQDYN
VLARSFPTNLTAKAMGYEVKPSFTVENEKGISTAPAVKF

Sequences:

>Translated_199_residues
MRFSVLRWLSLALAVLAAPFLSACGYNDFQAKDEATKAAWAEVVNQYQRRADLIPNLVNTVKGYASHERETLEAVTRARA
AATSIQVTPETLKDPAAFQKFQQAQGELSSALSRLMAVSENYPQLKADASFRDLQSQLEGTENRITVARQRYIRAVQDYN
VLARSFPTNLTAKAMGYEVKPSFTVENEKGISTAPAVKF
>Mature_199_residues
MRFSVLRWLSLALAVLAAPFLSACGYNDFQAKDEATKAAWAEVVNQYQRRADLIPNLVNTVKGYASHERETLEAVTRARA
AATSIQVTPETLKDPAAFQKFQQAQGELSSALSRLMAVSENYPQLKADASFRDLQSQLEGTENRITVARQRYIRAVQDYN
VLARSFPTNLTAKAMGYEVKPSFTVENEKGISTAPAVKF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 22082; Mature: 22082

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSVLRWLSLALAVLAAPFLSACGYNDFQAKDEATKAAWAEVVNQYQRRADLIPNLVNT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKGYASHERETLEAVTRARAAATSIQVTPETLKDPAAFQKFQQAQGELSSALSRLMAVSE
HHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC
NYPQLKADASFRDLQSQLEGTENRITVARQRYIRAVQDYNVLARSFPTNLTAKAMGYEVK
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCEECC
PSFTVENEKGISTAPAVKF
CCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRFSVLRWLSLALAVLAAPFLSACGYNDFQAKDEATKAAWAEVVNQYQRRADLIPNLVNT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKGYASHERETLEAVTRARAAATSIQVTPETLKDPAAFQKFQQAQGELSSALSRLMAVSE
HHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC
NYPQLKADASFRDLQSQLEGTENRITVARQRYIRAVQDYNVLARSFPTNLTAKAMGYEVK
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCEECC
PSFTVENEKGISTAPAVKF
CCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]