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The map label for this gene is 17545350

Identifier: 17545350

GI number: 17545350

Start: 678246

End: 678974

Strand: Reverse

Name: 17545350

Synonym: RSc0631

Alternate gene names: NA

Gene position: 678974-678246 (Counterclockwise)

Preceding gene: 17545351

Following gene: 17545343

Centisome position: 18.27

GC content: 63.51

Gene sequence:

>729_bases
ATGAACACAAGCGCATCATCAAGCACCGATCCGCTGTTTCAGATGATCGGCGCGGTTTCTCCGGTTCTCGTGCCTTACAC
CCGGCACAGGATCGTCGAAGAACTCTGGCACCGCCCAGGGCTCCAGCCGCGCGACCGCGCGATCGTCACGCTTTCCGTGC
TGGTTTCCCGAAACGCGTCCAACGCCTATGACCACTACCTCAACAAGGCGCTCGACAGCGGGCTAAAGCCGAGCGAGCTT
TCCGAGTTGCTGACCCACCTGGCGTTCTATGCGAGCTTTGCGTACTCGTTCGGCGCAGTGGCCGTGCTCAAGGGCATCTT
CGAGGCACGCGGCATCACCGTCGATGCGCTTCCCGAGGTTTCTCCCGCTTTGCTTGCGGCAGAAGAGGCGCTGCCAGGCG
CGGCAAAACGGACCGCGTTCCTGGAGGCCAACGTCGCGCCTGCTTCACAGGCCTTGCTGCACTTCACCGATGCGCTGCTC
AATCACGAGGTCTGGCTGAGGCCGGGCCTGGCGACGCGCGACCGCGCACTTGCCACGATCGCTTCCCTGGCAGCGCAAGG
GCAGGCGGACGTGTTGCCGACCTATCTGGAGCGCGCGTTGGCAAGCGGTGTCACCAAGGAAGCAATCGGTGAGCTGCTGG
CGCATGTTGCCTTCTATGGCGGATGGGGCAACGCGATCCAGGCGGCTTCCGCCGTGAGCAGATATTGGAGCGACAGCGCC
GCCGGATAA

Upstream 100 bases:

>100_bases
GCTTCGTCATTGATATGTCATCACTGGCGGCGGACAAGCCCTGACACCATCGACTCCGCAAGGGCACACGCCCTTGCGAG
TCCACCACAACACTGACAAC

Downstream 100 bases:

>100_bases
CCGAGTCGCGAGAATCTACGCCCCCTCAGGGCGGAGCAGAACGCCAACGTTCGAGCAGGGGGCTGGAGGCGAAACGCCTC
CTATTTCTCAATGCGTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: 4-Carboxymuconolactone Decarboxylase; 4-Carboxymuconolactone Decarboxylase Protein; Carboxymuconolactone Decarboxylase Family Protein; Gamma-Carboxymuconolactone Decarboxylase Protein; Carboxymuconolactone Decarboxylase Protein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MNTSASSSTDPLFQMIGAVSPVLVPYTRHRIVEELWHRPGLQPRDRAIVTLSVLVSRNASNAYDHYLNKALDSGLKPSEL
SELLTHLAFYASFAYSFGAVAVLKGIFEARGITVDALPEVSPALLAAEEALPGAAKRTAFLEANVAPASQALLHFTDALL
NHEVWLRPGLATRDRALATIASLAAQGQADVLPTYLERALASGVTKEAIGELLAHVAFYGGWGNAIQAASAVSRYWSDSA
AG

Sequences:

>Translated_242_residues
MNTSASSSTDPLFQMIGAVSPVLVPYTRHRIVEELWHRPGLQPRDRAIVTLSVLVSRNASNAYDHYLNKALDSGLKPSEL
SELLTHLAFYASFAYSFGAVAVLKGIFEARGITVDALPEVSPALLAAEEALPGAAKRTAFLEANVAPASQALLHFTDALL
NHEVWLRPGLATRDRALATIASLAAQGQADVLPTYLERALASGVTKEAIGELLAHVAFYGGWGNAIQAASAVSRYWSDSA
AG
>Mature_242_residues
MNTSASSSTDPLFQMIGAVSPVLVPYTRHRIVEELWHRPGLQPRDRAIVTLSVLVSRNASNAYDHYLNKALDSGLKPSEL
SELLTHLAFYASFAYSFGAVAVLKGIFEARGITVDALPEVSPALLAAEEALPGAAKRTAFLEANVAPASQALLHFTDALL
NHEVWLRPGLATRDRALATIASLAAQGQADVLPTYLERALASGVTKEAIGELLAHVAFYGGWGNAIQAASAVSRYWSDSA
AG

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25752; Mature: 25752

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSASSSTDPLFQMIGAVSPVLVPYTRHRIVEELWHRPGLQPRDRAIVTLSVLVSRNAS
CCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
NAYDHYLNKALDSGLKPSELSELLTHLAFYASFAYSFGAVAVLKGIFEARGITVDALPEV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC
SPALLAAEEALPGAAKRTAFLEANVAPASQALLHFTDALLNHEVWLRPGLATRDRALATI
CHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHH
ASLAAQGQADVLPTYLERALASGVTKEAIGELLAHVAFYGGWGNAIQAASAVSRYWSDSA
HHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
AG
CC
>Mature Secondary Structure
MNTSASSSTDPLFQMIGAVSPVLVPYTRHRIVEELWHRPGLQPRDRAIVTLSVLVSRNAS
CCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
NAYDHYLNKALDSGLKPSELSELLTHLAFYASFAYSFGAVAVLKGIFEARGITVDALPEV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC
SPALLAAEEALPGAAKRTAFLEANVAPASQALLHFTDALLNHEVWLRPGLATRDRALATI
CHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHH
ASLAAQGQADVLPTYLERALASGVTKEAIGELLAHVAFYGGWGNAIQAASAVSRYWSDSA
HHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
AG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA