| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is hemH
Identifier: 17545293
GI number: 17545293
Start: 618408
End: 619316
Strand: Direct
Name: hemH
Synonym: RSc0574
Alternate gene names: 17545293
Gene position: 618408-619316 (Clockwise)
Preceding gene: 17545292
Following gene: 17545294
Centisome position: 16.64
GC content: 68.21
Gene sequence:
>909_bases GTGTCTTCCGCACTCTATGAATCGTCGATCACCAGCCTGCCGCTGCTCGGCCGCGGCAAGGTGCGCGAAAACTACGCCGT GGGCGACGACAAGCTGCTGATGGTCACCACCGACCGCCTGTCGGCCTTCGACGTGATCCTCGGCCAGCCGATTCCGGACA AGGGCCGCGTCCTGGCGCAGATGTCGGATTTCTGGTTCCGCAAGCTGCGCCACATCGTGCCGACGCACGAGACGGGCATT GCGCCGGAAGCGGTGGTGCAGCCCGGCGAAGCCGACCAGGTGCGCGGCCGCGCCATCGTGGTCAAGCGTCTCAAGCCGAT CCTGGTGGAAGCCGTGGTGCGCGGCTACCTGGCCGGCAGCGGCTGGAAGGACTACCAGGCCACCGGCAAGGTCTGCGGCG TGCAGCTCGCCCCCGGCCTGCGCAACGCCGAGAAGCTGCCCGAGCCCATCTTCACCCCCGCCGCCAAGGCCGACGTGGGC GAGCACGACGAGAACATCTCGTTCGACGAAGTCGAGCGCCGCATCGGCCCCGAGCTGGCCGCGCAGATCCGCGACGTCAG CATCCGCCTGTACAAGGAAGCCTCCGACTTTGCCGCCACGCGCGGCATCATCATCGCCGACACCAAGTTCGAGTTCGGCC TGGACGAGAACGGCACGCTCACGCTGATGGACGAAGCGCTGACCGCCGATTCGTCGCGCTTCTGGCCGGCCGATTCGTAC CAGGTGGGCACCAACCCGCCGTCGTTCGACAAGCAGTTCGTGCGCGACTGGCTGGAGGCCGTGCGCATCGACGGCCAGCC GTGGCCGAAGACCGCGCCGGCGCCGCAGCTGCCCGCCGACATCATCGAGAAGACCGCGGACAAGTACCGCGAAGCACTGA CCCGCCTGACCGGCGAGACGCTGCGCTGA
Upstream 100 bases:
>100_bases CCCCGCGCCAGCCGTTTTTCATGGGGCCGGCCACGTATAATGTCGGCCTTCCACATTTTTTTCTTCCTCTTTGGGTTTCG CCGTGTCCGCCACCCCCGCC
Downstream 100 bases:
>100_bases GGGAGCGACGACGATGACCGCATCGCAATCCGCGCCGCTCGTCGGCGTCGTCATGGGTTCCAGCTCCGACTGGGACGTCA TGCAGCACGCCGTGGTCCTG
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSSALYESSITSLPLLGRGKVRENYAVGDDKLLMVTTDRLSAFDVILGQPIPDKGRVLAQMSDFWFRKLRHIVPTHETGI APEAVVQPGEADQVRGRAIVVKRLKPILVEAVVRGYLAGSGWKDYQATGKVCGVQLAPGLRNAEKLPEPIFTPAAKADVG EHDENISFDEVERRIGPELAAQIRDVSIRLYKEASDFAATRGIIIADTKFEFGLDENGTLTLMDEALTADSSRFWPADSY QVGTNPPSFDKQFVRDWLEAVRIDGQPWPKTAPAPQLPADIIEKTADKYREALTRLTGETLR
Sequences:
>Translated_302_residues MSSALYESSITSLPLLGRGKVRENYAVGDDKLLMVTTDRLSAFDVILGQPIPDKGRVLAQMSDFWFRKLRHIVPTHETGI APEAVVQPGEADQVRGRAIVVKRLKPILVEAVVRGYLAGSGWKDYQATGKVCGVQLAPGLRNAEKLPEPIFTPAAKADVG EHDENISFDEVERRIGPELAAQIRDVSIRLYKEASDFAATRGIIIADTKFEFGLDENGTLTLMDEALTADSSRFWPADSY QVGTNPPSFDKQFVRDWLEAVRIDGQPWPKTAPAPQLPADIIEKTADKYREALTRLTGETLR >Mature_301_residues SSALYESSITSLPLLGRGKVRENYAVGDDKLLMVTTDRLSAFDVILGQPIPDKGRVLAQMSDFWFRKLRHIVPTHETGIA PEAVVQPGEADQVRGRAIVVKRLKPILVEAVVRGYLAGSGWKDYQATGKVCGVQLAPGLRNAEKLPEPIFTPAAKADVGE HDENISFDEVERRIGPELAAQIRDVSIRLYKEASDFAATRGIIIADTKFEFGLDENGTLTLMDEALTADSSRFWPADSYQ VGTNPPSFDKQFVRDWLEAVRIDGQPWPKTAPAPQLPADIIEKTADKYREALTRLTGETLR
Specific function: Unknown
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=296, Percent_Identity=44.5945945945946, Blast_Score=263, Evalue=4e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PUR7_RALSO (Q8Y1W3)
Other databases:
- EMBL: AL646052 - RefSeq: NP_518695.1 - ProteinModelPortal: Q8Y1W3 - SMR: Q8Y1W3 - GeneID: 1219379 - GenomeReviews: AL646052_GR - KEGG: rso:RSc0574 - NMPDR: fig|267608.1.peg.574 - HOGENOM: HBG555040 - OMA: LTLMDEV - ProtClustDB: PRK13961 - BioCyc: RSOL267608:RSC0574-MONOMER - BRENDA: 6.3.2.6 - HAMAP: MF_00137 - InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 - Gene3D: G3DSA:3.30.470.20 - PANTHER: PTHR11609 - TIGRFAMs: TIGR00081
Pfam domain/function: PF01259 SAICAR_synt
EC number: =6.3.2.6
Molecular weight: Translated: 33375; Mature: 33244
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS01057 SAICAR_SYNTHETASE_1; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSALYESSITSLPLLGRGKVRENYAVGDDKLLMVTTDRLSAFDVILGQPIPDKGRVLAQ CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCHHHHH MSDFWFRKLRHIVPTHETGIAPEAVVQPGEADQVRGRAIVVKRLKPILVEAVVRGYLAGS HHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC GWKDYQATGKVCGVQLAPGLRNAEKLPEPIFTPAAKADVGEHDENISFDEVERRIGPELA CCCCHHCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHH AQIRDVSIRLYKEASDFAATRGIIIADTKFEFGLDENGTLTLMDEALTADSSRFWPADSY HHHHHHHHEEEHHHHHHHHHCCEEEEECCEEECCCCCCEEEEEEHHHCCCCCCCCCCCCE QVGTNPPSFDKQFVRDWLEAVRIDGQPWPKTAPAPQLPADIIEKTADKYREALTRLTGET ECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC LR CC >Mature Secondary Structure SSALYESSITSLPLLGRGKVRENYAVGDDKLLMVTTDRLSAFDVILGQPIPDKGRVLAQ CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCHHHHH MSDFWFRKLRHIVPTHETGIAPEAVVQPGEADQVRGRAIVVKRLKPILVEAVVRGYLAGS HHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC GWKDYQATGKVCGVQLAPGLRNAEKLPEPIFTPAAKADVGEHDENISFDEVERRIGPELA CCCCHHCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHH AQIRDVSIRLYKEASDFAATRGIIIADTKFEFGLDENGTLTLMDEALTADSSRFWPADSY HHHHHHHHEEEHHHHHHHHHCCEEEEECCEEECCCCCCEEEEEEHHHCCCCCCCCCCCCE QVGTNPPSFDKQFVRDWLEAVRIDGQPWPKTAPAPQLPADIIEKTADKYREALTRLTGET ECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC LR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852