| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is rhlE1 [H]
Identifier: 17545258
GI number: 17545258
Start: 582836
End: 584458
Strand: Direct
Name: rhlE1 [H]
Synonym: RSc0539
Alternate gene names: 17545258
Gene position: 582836-584458 (Clockwise)
Preceding gene: 17545237
Following gene: 17545259
Centisome position: 15.68
GC content: 69.38
Gene sequence:
>1623_bases ATGTCGTTTTCCGAACTCGGCTTGTCAGACAAGCTGGTACGTGCCGTTGCCGAACTCGGCTACGCAGAACCCACCCCGAT TCAACGCCAGGCCATCCCCGCGATCCTCAAGGGCGGTGACCTGCTTGCCGGTGCACAGACCGGCACCGGCAAGACCGCCG GCTTCACATTGCCGCTGCTGCATCGCCTGTCCGCTGTGCAGCCCAACAAGGTGCAGACGCCCCACGGCATGCGCTATCCC ATCCGTGCGCTGGTGCTCACACCCACGCGCGAGCTCGCCGCGCAGGTGGAAGAGAGCGTGCGCGCCTACGGCAAGTACCT GCCGCTGAAGTCGATGGTGATGTTCGGCGGCGTCGGCATCAATCCGCAGATCGATGCGCTCAAGCGCGGCGTCGATATCG TCGTGGCCACGCCGGGCCGTCTGCTGGACCACGTCGGCCAGCGCACCATCGATCTGTCGCACATCGAACTGCTGGTGCTG GACGAAGCCGACCGCATGCTGGACATGGGCTTCATCCACGACATCCGCAAGATCCTCAACATCCTGCCGCCCAAGCGCCA GAACCTGCTGTTCTCGGCGACGTTCTCGGATGATATTCGCGCGCTGGCCGACCGCCTGCTGGATCAGCCCGCGCTGATCG AAGTCGCGCGCCGCAACACCACTGCCGAGACGGTCGAACAGCGCATCTACCCGGTCGACCGCGAACGCAAGCGCGAACTG CTCGCCAAGCTCGTGAGCGACAACGACTGGCACCAGGTGCTGGTCTTCACGCGCACCAAGCACGGCGCCAACCGCCTGGC CGAGCAGCTCACGCGCGACGGCATCCCGGCGCTGGCCATCCACGGCAACAAGAGCCAGTCGGCGCGCACGCGGGCGCTGT CGGAGTTCAAGGCCGGGACGCTGCGCGTGCTGGTCGCCACCGACATCGCCGCACGCGGCATCGATATCGACCAACTGCCG CACGTGGTCAACTTCGACCTGCCCAACGTGCCGGAAGACTATGTGCACCGCATCGGCCGCACCGGCCGCGCGGGCGCGCA GGGCGAGGCGATCTCGCTGGTGTGCGTGGACGAGCATGGCCTGCTGCGCGACATCGAGCGCCTGATCAAGCGCGAACTGC CGCGCACCGTCCTGGCGGGCTTCGAGCCGGACCCGACCATCGCGCCGGAGCCGATTCCGAACGGCCGCAACAGTGCCCGT GCGCCGCGCCAGGGTGGCGGTCGCAGTCAGCCGCCGCGCCAGGCCGCGGGCAACGCCGCGCCGCGCGAGCCTCGTGCGCC GCGTGAGCCGCGCCGCGAGTCGGGCGCCAGCGGTCAGGGTCAAGGGCAGGGTCAGGGCCAAGGCCGCAATGGCGGCGGCC GCCAGCGTCAGGCACAAGGCCAGCGCGATGGCCAAGCCGCGCCGAAGCCGCGCGGCGGTCAGGGCAGCGGTAACGGCAAC GGCCAATCGCATGCGCGCGGCCAGCGCCAGGGCAACGGCCAAGGCAACGGGCAGGGCGGCCAGCGCCGTGCGTCCAACAC GCAAGCCGCGCAGCCGACCAAGGTGGCGCAGCCCGCACCCAAGCAGCCGTTCAACGGCCTGTTTGCCAAGGCAGCGGCAC TGCTCGGCGGCCGCAAGGCCTGA
Upstream 100 bases:
>100_bases CGCAGTCCCCGGGGTCCAGTCGCCCCGTCACCTACCCAGGCTCTGTCCACGATTGGCGCACGAACGAATGCGCGGGACAC GCCGGTCCAATTGCTTTTCC
Downstream 100 bases:
>100_bases CATCCATGCGGCACGACGGTCAGCCTCCATCGCCCGATGCGTCCGAGGCGCCCTATGCCGGCCTGACGCCCGACAGCATT CTCGATGCGCTGGCGCAGGT
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTAGFTLPLLHRLSAVQPNKVQTPHGMRYP IRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGINPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVL DEADRMLDMGFIHDIRKILNILPPKRQNLLFSATFSDDIRALADRLLDQPALIEVARRNTTAETVEQRIYPVDRERKREL LAKLVSDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALSEFKAGTLRVLVATDIAARGIDIDQLP HVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHGLLRDIERLIKRELPRTVLAGFEPDPTIAPEPIPNGRNSAR APRQGGGRSQPPRQAAGNAAPREPRAPREPRRESGASGQGQGQGQGQGRNGGGRQRQAQGQRDGQAAPKPRGGQGSGNGN GQSHARGQRQGNGQGNGQGGQRRASNTQAAQPTKVAQPAPKQPFNGLFAKAAALLGGRKA
Sequences:
>Translated_540_residues MSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTAGFTLPLLHRLSAVQPNKVQTPHGMRYP IRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGINPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVL DEADRMLDMGFIHDIRKILNILPPKRQNLLFSATFSDDIRALADRLLDQPALIEVARRNTTAETVEQRIYPVDRERKREL LAKLVSDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALSEFKAGTLRVLVATDIAARGIDIDQLP HVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHGLLRDIERLIKRELPRTVLAGFEPDPTIAPEPIPNGRNSAR APRQGGGRSQPPRQAAGNAAPREPRAPREPRRESGASGQGQGQGQGQGRNGGGRQRQAQGQRDGQAAPKPRGGQGSGNGN GQSHARGQRQGNGQGNGQGGQRRASNTQAAQPTKVAQPAPKQPFNGLFAKAAALLGGRKA >Mature_539_residues SFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTAGFTLPLLHRLSAVQPNKVQTPHGMRYPI RALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGINPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLD EADRMLDMGFIHDIRKILNILPPKRQNLLFSATFSDDIRALADRLLDQPALIEVARRNTTAETVEQRIYPVDRERKRELL AKLVSDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALSEFKAGTLRVLVATDIAARGIDIDQLPH VVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHGLLRDIERLIKRELPRTVLAGFEPDPTIAPEPIPNGRNSARA PRQGGGRSQPPRQAAGNAAPREPRAPREPRRESGASGQGQGQGQGQGRNGGGRQRQAQGQRDGQAAPKPRGGQGSGNGNG QSHARGQRQGNGQGNGQGGQRRASNTQAAQPTKVAQPAPKQPFNGLFAKAAALLGGRKA
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI301171467, Length=389, Percent_Identity=41.9023136246787, Blast_Score=283, Evalue=3e-76, Organism=Homo sapiens, GI87196351, Length=389, Percent_Identity=41.9023136246787, Blast_Score=283, Evalue=4e-76, Organism=Homo sapiens, GI301171475, Length=389, Percent_Identity=41.9023136246787, Blast_Score=283, Evalue=4e-76, Organism=Homo sapiens, GI169881239, Length=392, Percent_Identity=41.5816326530612, Blast_Score=279, Evalue=5e-75, Organism=Homo sapiens, GI13514809, Length=392, Percent_Identity=41.5816326530612, Blast_Score=279, Evalue=5e-75, Organism=Homo sapiens, GI31542656, Length=380, Percent_Identity=41.8421052631579, Blast_Score=277, Evalue=1e-74, Organism=Homo sapiens, GI224593278, Length=391, Percent_Identity=41.4322250639386, Blast_Score=272, Evalue=5e-73, Organism=Homo sapiens, GI41327773, Length=368, Percent_Identity=39.945652173913, Blast_Score=269, Evalue=6e-72, Organism=Homo sapiens, GI13518015, Length=364, Percent_Identity=39.8351648351648, Blast_Score=268, Evalue=9e-72, Organism=Homo sapiens, GI262231852, Length=364, Percent_Identity=39.8351648351648, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI216548263, Length=364, Percent_Identity=39.8351648351648, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI262118318, Length=364, Percent_Identity=39.8351648351648, Blast_Score=266, Evalue=4e-71, Organism=Homo sapiens, GI20149629, Length=422, Percent_Identity=36.7298578199052, Blast_Score=265, Evalue=6e-71, Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=41.9540229885057, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI148613856, Length=375, Percent_Identity=39.4666666666667, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI38201710, Length=375, Percent_Identity=39.4666666666667, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI41327771, Length=395, Percent_Identity=36.7088607594937, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI4758138, Length=359, Percent_Identity=39.5543175487465, Blast_Score=256, Evalue=5e-68, Organism=Homo sapiens, GI222352149, Length=364, Percent_Identity=40.1098901098901, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI45446747, Length=371, Percent_Identity=37.7358490566038, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI45446743, Length=371, Percent_Identity=37.7358490566038, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI7661920, Length=380, Percent_Identity=36.5789473684211, Blast_Score=249, Evalue=3e-66, Organism=Homo sapiens, GI21071032, Length=376, Percent_Identity=38.031914893617, Blast_Score=245, Evalue=1e-64, Organism=Homo sapiens, GI51094101, Length=373, Percent_Identity=36.9973190348526, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI164419743, Length=373, Percent_Identity=36.9973190348526, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI188035877, Length=374, Percent_Identity=38.2352941176471, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI164664518, Length=372, Percent_Identity=34.9462365591398, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI41327776, Length=422, Percent_Identity=34.1232227488152, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI4503529, Length=385, Percent_Identity=35.8441558441558, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI21040371, Length=359, Percent_Identity=33.983286908078, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI83700235, Length=381, Percent_Identity=35.4330708661417, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI4758112, Length=359, Percent_Identity=33.4261838440111, Blast_Score=207, Evalue=3e-53, Organism=Homo sapiens, GI18375623, Length=359, Percent_Identity=33.4261838440111, Blast_Score=207, Evalue=3e-53, Organism=Homo sapiens, GI38569505, Length=376, Percent_Identity=35.1063829787234, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI38569503, Length=376, Percent_Identity=35.1063829787234, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI38327634, Length=386, Percent_Identity=33.419689119171, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI13514831, Length=377, Percent_Identity=33.42175066313, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI17505907, Length=411, Percent_Identity=32.360097323601, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI8922886, Length=370, Percent_Identity=35.9459459459459, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI6005743, Length=370, Percent_Identity=35.6756756756757, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI50659095, Length=379, Percent_Identity=33.7730870712401, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI164419732, Length=359, Percent_Identity=35.0974930362117, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI62241022, Length=353, Percent_Identity=35.4107648725212, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI9506931, Length=405, Percent_Identity=31.6049382716049, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI13129006, Length=380, Percent_Identity=33.6842105263158, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI41327779, Length=358, Percent_Identity=33.7988826815642, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI256223453, Length=405, Percent_Identity=31.6049382716049, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI62241024, Length=330, Percent_Identity=35.7575757575758, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI4826686, Length=343, Percent_Identity=30.0291545189504, Blast_Score=165, Evalue=8e-41, Organism=Homo sapiens, GI9966805, Length=325, Percent_Identity=32.9230769230769, Blast_Score=156, Evalue=5e-38, Organism=Homo sapiens, GI20336298, Length=360, Percent_Identity=31.1111111111111, Blast_Score=146, Evalue=6e-35, Organism=Homo sapiens, GI256773275, Length=381, Percent_Identity=32.5459317585302, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI154759257, Length=430, Percent_Identity=28.3720930232558, Blast_Score=144, Evalue=3e-34, Organism=Escherichia coli, GI1787016, Length=394, Percent_Identity=68.0203045685279, Blast_Score=550, Evalue=1e-158, Organism=Escherichia coli, GI87082221, Length=382, Percent_Identity=41.8848167539267, Blast_Score=290, Evalue=1e-79, Organism=Escherichia coli, GI1790214, Length=438, Percent_Identity=39.4977168949772, Blast_Score=275, Evalue=6e-75, Organism=Escherichia coli, GI1787605, Length=342, Percent_Identity=43.2748538011696, Blast_Score=247, Evalue=2e-66, Organism=Escherichia coli, GI1788930, Length=391, Percent_Identity=40.6649616368286, Blast_Score=236, Evalue=3e-63, Organism=Escherichia coli, GI48994977, Length=380, Percent_Identity=25, Blast_Score=68, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71995514, Length=389, Percent_Identity=42.4164524421594, Blast_Score=285, Evalue=5e-77, Organism=Caenorhabditis elegans, GI17510307, Length=389, Percent_Identity=42.4164524421594, Blast_Score=284, Evalue=8e-77, Organism=Caenorhabditis elegans, GI17510309, Length=389, Percent_Identity=42.4164524421594, Blast_Score=284, Evalue=9e-77, Organism=Caenorhabditis elegans, GI32565321, Length=393, Percent_Identity=39.1857506361323, Blast_Score=280, Evalue=2e-75, Organism=Caenorhabditis elegans, GI71995718, Length=388, Percent_Identity=41.4948453608247, Blast_Score=266, Evalue=3e-71, Organism=Caenorhabditis elegans, GI86570094, Length=359, Percent_Identity=40.6685236768802, Blast_Score=258, Evalue=7e-69, Organism=Caenorhabditis elegans, GI115533224, Length=411, Percent_Identity=38.1995133819951, Blast_Score=258, Evalue=8e-69, Organism=Caenorhabditis elegans, GI71995724, Length=367, Percent_Identity=38.9645776566758, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI17507121, Length=367, Percent_Identity=38.6920980926431, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI17510559, Length=393, Percent_Identity=38.1679389312977, Blast_Score=254, Evalue=6e-68, Organism=Caenorhabditis elegans, GI17507879, Length=387, Percent_Identity=37.4677002583979, Blast_Score=246, Evalue=3e-65, Organism=Caenorhabditis elegans, GI17555296, Length=354, Percent_Identity=38.7005649717514, Blast_Score=245, Evalue=6e-65, Organism=Caenorhabditis elegans, GI17507877, Length=393, Percent_Identity=36.8956743002545, Blast_Score=244, Evalue=1e-64, Organism=Caenorhabditis elegans, GI71987143, Length=380, Percent_Identity=35, Blast_Score=243, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17537549, Length=358, Percent_Identity=37.1508379888268, Blast_Score=234, Evalue=8e-62, Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=36.6576819407008, Blast_Score=228, Evalue=8e-60, Organism=Caenorhabditis elegans, GI17507945, Length=394, Percent_Identity=37.3096446700508, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17552114, Length=404, Percent_Identity=32.6732673267327, Blast_Score=221, Evalue=9e-58, Organism=Caenorhabditis elegans, GI115532548, Length=381, Percent_Identity=36.2204724409449, Blast_Score=214, Evalue=7e-56, Organism=Caenorhabditis elegans, GI71999644, Length=445, Percent_Identity=32.1348314606742, Blast_Score=214, Evalue=7e-56, Organism=Caenorhabditis elegans, GI115532546, Length=381, Percent_Identity=36.2204724409449, Blast_Score=214, Evalue=7e-56, Organism=Caenorhabditis elegans, GI71999646, Length=445, Percent_Identity=32.1348314606742, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17552642, Length=385, Percent_Identity=34.2857142857143, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17509811, Length=359, Percent_Identity=32.3119777158774, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=33.7696335078534, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI71982858, Length=356, Percent_Identity=30.8988764044944, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17505370, Length=374, Percent_Identity=35.2941176470588, Blast_Score=192, Evalue=5e-49, Organism=Caenorhabditis elegans, GI193208216, Length=412, Percent_Identity=31.0679611650485, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI193206561, Length=365, Percent_Identity=32.3287671232877, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17536103, Length=401, Percent_Identity=30.9226932668329, Blast_Score=168, Evalue=9e-42, Organism=Caenorhabditis elegans, GI17508543, Length=424, Percent_Identity=28.3018867924528, Blast_Score=167, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17536101, Length=401, Percent_Identity=30.9226932668329, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI17536099, Length=401, Percent_Identity=30.9226932668329, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI25148203, Length=423, Percent_Identity=26.0047281323877, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=31.8652849740933, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17556951, Length=351, Percent_Identity=31.0541310541311, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17553716, Length=384, Percent_Identity=27.0833333333333, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=32.171581769437, Blast_Score=144, Evalue=9e-35, Organism=Caenorhabditis elegans, GI25148291, Length=326, Percent_Identity=26.6871165644172, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI71997889, Length=379, Percent_Identity=26.3852242744063, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI25148205, Length=342, Percent_Identity=25.4385964912281, Blast_Score=119, Evalue=6e-27, Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=30.7692307692308, Blast_Score=116, Evalue=4e-26, Organism=Caenorhabditis elegans, GI71987152, Length=111, Percent_Identity=39.6396396396396, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17565430, Length=377, Percent_Identity=24.9336870026525, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17557982, Length=379, Percent_Identity=23.7467018469657, Blast_Score=81, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6325138, Length=379, Percent_Identity=42.4802110817942, Blast_Score=285, Evalue=2e-77, Organism=Saccharomyces cerevisiae, GI6324778, Length=401, Percent_Identity=38.1546134663342, Blast_Score=266, Evalue=8e-72, Organism=Saccharomyces cerevisiae, GI6324217, Length=364, Percent_Identity=41.7582417582418, Blast_Score=263, Evalue=7e-71, Organism=Saccharomyces cerevisiae, GI6321856, Length=376, Percent_Identity=39.8936170212766, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6320041, Length=405, Percent_Identity=36.5432098765432, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6320224, Length=371, Percent_Identity=34.2318059299191, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6321360, Length=371, Percent_Identity=40.1617250673854, Blast_Score=233, Evalue=4e-62, Organism=Saccharomyces cerevisiae, GI6323021, Length=363, Percent_Identity=37.1900826446281, Blast_Score=231, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6320119, Length=374, Percent_Identity=35.0267379679144, Blast_Score=217, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6323947, Length=374, Percent_Identity=33.6898395721925, Blast_Score=217, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6322912, Length=379, Percent_Identity=35.8839050131926, Blast_Score=217, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6322323, Length=379, Percent_Identity=35.8839050131926, Blast_Score=217, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6320173, Length=430, Percent_Identity=31.1627906976744, Blast_Score=216, Evalue=7e-57, Organism=Saccharomyces cerevisiae, GI6320449, Length=396, Percent_Identity=32.3232323232323, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6319714, Length=384, Percent_Identity=33.0729166666667, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6321963, Length=388, Percent_Identity=34.5360824742268, Blast_Score=203, Evalue=7e-53, Organism=Saccharomyces cerevisiae, GI6322427, Length=363, Percent_Identity=32.2314049586777, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=364, Percent_Identity=34.6153846153846, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6320400, Length=426, Percent_Identity=29.3427230046948, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6321111, Length=353, Percent_Identity=30.5949008498584, Blast_Score=169, Evalue=7e-43, Organism=Saccharomyces cerevisiae, GI6321267, Length=361, Percent_Identity=31.3019390581717, Blast_Score=163, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=418, Percent_Identity=27.9904306220096, Blast_Score=161, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=26.634382566586, Blast_Score=144, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6322876, Length=427, Percent_Identity=27.8688524590164, Blast_Score=134, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6324366, Length=427, Percent_Identity=24.824355971897, Blast_Score=119, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6321374, Length=422, Percent_Identity=24.4075829383886, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI24584399, Length=356, Percent_Identity=41.0112359550562, Blast_Score=278, Evalue=8e-75, Organism=Drosophila melanogaster, GI17985987, Length=392, Percent_Identity=41.5816326530612, Blast_Score=275, Evalue=5e-74, Organism=Drosophila melanogaster, GI21355075, Length=371, Percent_Identity=39.3530997304582, Blast_Score=269, Evalue=3e-72, Organism=Drosophila melanogaster, GI24642151, Length=371, Percent_Identity=39.0835579514825, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24585582, Length=389, Percent_Identity=38.3033419023136, Blast_Score=262, Evalue=5e-70, Organism=Drosophila melanogaster, GI21356161, Length=412, Percent_Identity=38.8349514563107, Blast_Score=261, Evalue=7e-70, Organism=Drosophila melanogaster, GI24584994, Length=393, Percent_Identity=37.1501272264631, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI28574962, Length=381, Percent_Identity=39.1076115485564, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI17977678, Length=392, Percent_Identity=37.7551020408163, Blast_Score=254, Evalue=8e-68, Organism=Drosophila melanogaster, GI24644479, Length=358, Percent_Identity=39.9441340782123, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI24644483, Length=358, Percent_Identity=39.9441340782123, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI281361218, Length=358, Percent_Identity=39.9441340782123, Blast_Score=254, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644481, Length=358, Percent_Identity=39.9441340782123, Blast_Score=254, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644487, Length=358, Percent_Identity=39.9441340782123, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI45551833, Length=358, Percent_Identity=39.9441340782123, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644485, Length=358, Percent_Identity=39.9441340782123, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI18857967, Length=381, Percent_Identity=37.2703412073491, Blast_Score=251, Evalue=9e-67, Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=39.3258426966292, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI24645031, Length=380, Percent_Identity=36.5789473684211, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI28575014, Length=372, Percent_Identity=36.5591397849462, Blast_Score=239, Evalue=5e-63, Organism=Drosophila melanogaster, GI17136814, Length=362, Percent_Identity=40.0552486187845, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24583279, Length=371, Percent_Identity=35.3099730458221, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI24583281, Length=371, Percent_Identity=35.3099730458221, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI24582080, Length=368, Percent_Identity=34.7826086956522, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI24582078, Length=368, Percent_Identity=34.7826086956522, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI17136248, Length=368, Percent_Identity=34.7826086956522, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI24582075, Length=368, Percent_Identity=34.7826086956522, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI281365720, Length=318, Percent_Identity=38.9937106918239, Blast_Score=208, Evalue=8e-54, Organism=Drosophila melanogaster, GI28571808, Length=377, Percent_Identity=33.1564986737401, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI28571809, Length=377, Percent_Identity=33.1564986737401, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24581954, Length=356, Percent_Identity=33.1460674157303, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI24581952, Length=356, Percent_Identity=33.1460674157303, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI24581956, Length=356, Percent_Identity=33.1460674157303, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI24642822, Length=381, Percent_Identity=31.758530183727, Blast_Score=190, Evalue=3e-48, Organism=Drosophila melanogaster, GI24666101, Length=364, Percent_Identity=34.8901098901099, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI17647335, Length=406, Percent_Identity=29.3103448275862, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI20130173, Length=447, Percent_Identity=28.4116331096197, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI21355559, Length=388, Percent_Identity=34.7938144329897, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI24643725, Length=411, Percent_Identity=29.4403892944039, Blast_Score=175, Evalue=6e-44, Organism=Drosophila melanogaster, GI28571338, Length=448, Percent_Identity=29.9107142857143, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI18859659, Length=448, Percent_Identity=29.9107142857143, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI24668515, Length=325, Percent_Identity=28.6153846153846, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24640164, Length=382, Percent_Identity=27.4869109947644, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI19920478, Length=354, Percent_Identity=30.225988700565, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI17136666, Length=432, Percent_Identity=28.4722222222222, Blast_Score=137, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 58201; Mature: 58070
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTAGFTLPLL CCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHH HRLSAVQPNKVQTPHGMRYPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGI HHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC NPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIHDIRKILN CCCHHHHHCCCEEEEECCHHHHHHHCCCEEEHHHEEEEEECCHHHHHHHHHHHHHHHHHH ILPPKRQNLLFSATFSDDIRALADRLLDQPALIEVARRNTTAETVEQRIYPVDRERKREL HCCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHH LAKLVSDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALSEFKAGT HHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCC LRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHG EEEEEEHHHHHCCCCHHHCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCC LLRDIERLIKRELPRTVLAGFEPDPTIAPEPIPNGRNSARAPRQGGGRSQPPRQAAGNAA HHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC PREPRAPREPRRESGASGQGQGQGQGQGRNGGGRQRQAQGQRDGQAAPKPRGGQGSGNGN CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC GQSHARGQRQGNGQGNGQGGQRRASNTQAAQPTKVAQPAPKQPFNGLFAKAAALLGGRKA CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTAGFTLPLL CHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHH HRLSAVQPNKVQTPHGMRYPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGI HHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC NPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIHDIRKILN CCCHHHHHCCCEEEEECCHHHHHHHCCCEEEHHHEEEEEECCHHHHHHHHHHHHHHHHHH ILPPKRQNLLFSATFSDDIRALADRLLDQPALIEVARRNTTAETVEQRIYPVDRERKREL HCCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHH LAKLVSDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALSEFKAGT HHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCC LRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHG EEEEEEHHHHHCCCCHHHCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCC LLRDIERLIKRELPRTVLAGFEPDPTIAPEPIPNGRNSARAPRQGGGRSQPPRQAAGNAA HHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC PREPRAPREPRRESGASGQGQGQGQGQGRNGGGRQRQAQGQRDGQAAPKPRGGQGSGNGN CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC GQSHARGQRQGNGQGNGQGGQRRASNTQAAQPTKVAQPAPKQPFNGLFAKAAALLGGRKA CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]