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The map label for this gene is rdoA [H]

Identifier: 17545259

GI number: 17545259

Start: 584464

End: 585507

Strand: Direct

Name: rdoA [H]

Synonym: RSc0540

Alternate gene names: 17545259

Gene position: 584464-585507 (Clockwise)

Preceding gene: 17545258

Following gene: 17545261

Centisome position: 15.73

GC content: 70.31

Gene sequence:

>1044_bases
ATGCGGCACGACGGTCAGCCTCCATCGCCCGATGCGTCCGAGGCGCCCTATGCCGGCCTGACGCCCGACAGCATTCTCGA
TGCGCTGGCGCAGGTCGGGCGGATGCCGGACGGCCGCATGTTCGCGCTCAACAGCTACGAGAACCGCGTCTACCAGGCGG
GCATCGAAGACGGCGCGCCGGTGGTCGTCAAGTTCTATCGCCCCGGGCGCTGGAACGACGCGCAGATCGTCGAAGAGCAC
GCCTTCACCGCCGAGCTGGCGGCGGCCGAGATCCCGGTGGTCGCGCCGCTGGAAATCGACGGCCGCACGCTGCACGCCTT
CGACCGCTGGCACTTCGCCGTCTTCCCGCGCTGCGCCGGCCGCGTGCCGGCCATCGACCGCGACGACACGCTCGAATGGA
TGGGGCGCTTCCTCGGCCGCATCCACGCCGTCGGCGCGCGCCGTCCGTTCATGGCCCGGCCCACGCTCGATATCGACACC
TTCGGCGTGCAGTCGCGCGACTGGCTGCTCGAACACGATTTCATCCCGCCCGACCTGCTGCCCGCCTGGCGCAGCGTGGC
CGATGCCGCGCTCGACGGCGTGCGCCGCTGCTACGACCGCGCGGGCGAGGTCGCGATGCTGCGCTTGCACGGCGATTGCC
ACGCCTCCAACGTGCTGTGGATCGACGAGGCCGATGCGCTCAAGAACGATCCGCTGCGCAGCGCCGGCCCGCACTTCGTC
GATTTCGACGATAGCCGCACCGGCCCCGCCGTGCAGGACCTGTGGATGCTGTTGTCGGGCGATCGCGCGTCGATGCGGCA
TCAACTGGCCAGCGTGCTCGCCGGCTACGAGGATTTCTGCGCGTTCGACACGCGCGAGCTGCATCTGGTGGAGGCGCTGC
GCACGCTGCGCCTGCTGCACTACAGCGCCTGGCTGGCGCGGCGCTGGAACGATCCGGCGTTCCCGGCGGCCTTCCCGTGG
TTCAACACGCAGCGCTACTGGCAGGACCGCGTGCTGGAGCTGCGCGAGCAGATCGCGCTGCTGGACGAACCGCCGCTCTG
GTAG

Upstream 100 bases:

>100_bases
CGCAGCCGACCAAGGTGGCGCAGCCCGCACCCAAGCAGCCGTTCAACGGCCTGTTTGCCAAGGCAGCGGCACTGCTCGGC
GGCCGCAAGGCCTGACATCC

Downstream 100 bases:

>100_bases
CACCAGGCGGCGGTTTTTTTCTGGCGGACGCGGCGGGCGCCCGATGCGCTCAGGCGAACTTGCCGGCCTGGAAGTCGCGC
ACGGCCTGGAAGATCTCTTC

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MRHDGQPPSPDASEAPYAGLTPDSILDALAQVGRMPDGRMFALNSYENRVYQAGIEDGAPVVVKFYRPGRWNDAQIVEEH
AFTAELAAAEIPVVAPLEIDGRTLHAFDRWHFAVFPRCAGRVPAIDRDDTLEWMGRFLGRIHAVGARRPFMARPTLDIDT
FGVQSRDWLLEHDFIPPDLLPAWRSVADAALDGVRRCYDRAGEVAMLRLHGDCHASNVLWIDEADALKNDPLRSAGPHFV
DFDDSRTGPAVQDLWMLLSGDRASMRHQLASVLAGYEDFCAFDTRELHLVEALRTLRLLHYSAWLARRWNDPAFPAAFPW
FNTQRYWQDRVLELREQIALLDEPPLW

Sequences:

>Translated_347_residues
MRHDGQPPSPDASEAPYAGLTPDSILDALAQVGRMPDGRMFALNSYENRVYQAGIEDGAPVVVKFYRPGRWNDAQIVEEH
AFTAELAAAEIPVVAPLEIDGRTLHAFDRWHFAVFPRCAGRVPAIDRDDTLEWMGRFLGRIHAVGARRPFMARPTLDIDT
FGVQSRDWLLEHDFIPPDLLPAWRSVADAALDGVRRCYDRAGEVAMLRLHGDCHASNVLWIDEADALKNDPLRSAGPHFV
DFDDSRTGPAVQDLWMLLSGDRASMRHQLASVLAGYEDFCAFDTRELHLVEALRTLRLLHYSAWLARRWNDPAFPAAFPW
FNTQRYWQDRVLELREQIALLDEPPLW
>Mature_347_residues
MRHDGQPPSPDASEAPYAGLTPDSILDALAQVGRMPDGRMFALNSYENRVYQAGIEDGAPVVVKFYRPGRWNDAQIVEEH
AFTAELAAAEIPVVAPLEIDGRTLHAFDRWHFAVFPRCAGRVPAIDRDDTLEWMGRFLGRIHAVGARRPFMARPTLDIDT
FGVQSRDWLLEHDFIPPDLLPAWRSVADAALDGVRRCYDRAGEVAMLRLHGDCHASNVLWIDEADALKNDPLRSAGPHFV
DFDDSRTGPAVQDLWMLLSGDRASMRHQLASVLAGYEDFCAFDTRELHLVEALRTLRLLHYSAWLARRWNDPAFPAAFPW
FNTQRYWQDRVLELREQIALLDEPPLW

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=336, Percent_Identity=44.3452380952381, Blast_Score=288, Evalue=3e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 39405; Mature: 39405

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHDGQPPSPDASEAPYAGLTPDSILDALAQVGRMPDGRMFALNSYENRVYQAGIEDGAP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECHHHHHEECCCCCCCC
VVVKFYRPGRWNDAQIVEEHAFTAELAAAEIPVVAPLEIDGRTLHAFDRWHFAVFPRCAG
EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHCHHHEECHHHCC
RVPAIDRDDTLEWMGRFLGRIHAVGARRPFMARPTLDIDTFGVQSRDWLLEHDFIPPDLL
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHH
PAWRSVADAALDGVRRCYDRAGEVAMLRLHGDCHASNVLWIDEADALKNDPLRSAGPHFV
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCHHHCCCCCCCCCCCEE
DFDDSRTGPAVQDLWMLLSGDRASMRHQLASVLAGYEDFCAFDTRELHLVEALRTLRLLH
ECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHH
YSAWLARRWNDPAFPAAFPWFNTQRYWQDRVLELREQIALLDEPPLW
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRHDGQPPSPDASEAPYAGLTPDSILDALAQVGRMPDGRMFALNSYENRVYQAGIEDGAP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECHHHHHEECCCCCCCC
VVVKFYRPGRWNDAQIVEEHAFTAELAAAEIPVVAPLEIDGRTLHAFDRWHFAVFPRCAG
EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHCHHHEECHHHCC
RVPAIDRDDTLEWMGRFLGRIHAVGARRPFMARPTLDIDTFGVQSRDWLLEHDFIPPDLL
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHH
PAWRSVADAALDGVRRCYDRAGEVAMLRLHGDCHASNVLWIDEADALKNDPLRSAGPHFV
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCHHHCCCCCCCCCCCEE
DFDDSRTGPAVQDLWMLLSGDRASMRHQLASVLAGYEDFCAFDTRELHLVEALRTLRLLH
ECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHH
YSAWLARRWNDPAFPAAFPWFNTQRYWQDRVLELREQIALLDEPPLW
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA