| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is plsC [H]
Identifier: 17545241
GI number: 17545241
Start: 559919
End: 560671
Strand: Reverse
Name: plsC [H]
Synonym: RSc0522
Alternate gene names: 17545241
Gene position: 560671-559919 (Counterclockwise)
Preceding gene: 17545242
Following gene: 17545240
Centisome position: 15.09
GC content: 64.94
Gene sequence:
>753_bases ATGACTTTTGTCCGTTCGCTGCTGTACCTGAGTTTCCTGATCGTCTGGACACCGTTCTATGCGGTGGCCTGCTTCATCGC CTTTCCGTTCATGAACCCGCATCGCCGTTTCTGGATGGTGACGGGTTGGACCAAGTCCGCCATCTGGGTGGCGCGCTGGC TGCTTGGCATCCGCTGGCAATGCCAGGGCTGGGAGCACATCGAGGAGGCGGTCGCCACCAACAAGCAGGTGGTCCTGCTC TCCAAGCATCAGTCGGCCTGGGAGACCATTGCATTTGTCGCGATCATGCCGCGCCCGCTGTGCTACGTGTTCAAGCGCGA GCTGCTGTATGTGCCGTTCTTCGGCTGGGCGCTCGGCATGCTGAAGATGGTGCACATCAACCGCAAGGACGGCACCAACG CCTTCGCCTCGGTGGCGCGCCAGGGCAAGGAGCGGATGGCCGACGGCTCGTGGATCATCATGTTCCCCGAAGGCACGCGC ACCCCGGTGGGCGCCCCCAACCCGCGCTACAAGAGCGGCGGCGCGCGGCTGGCCGTGGACACCGGCGCGTGGGTCATCCC GATCGCCCACAACTCGGGCCGGCTGTGGCCGCGCAACGCGTTCCTGAAATACCCGGGGCTGATCACGCTGTCGATTGGTC CGGCCATCTCCAGCGCCGGCAAGAGCGGCGACCAGCTCAACCGTGAAGTGCAAGCGTGGATCGAGGCGGAAATGCGCCGG ATCGACGCGGACAGCTACCGCGAGCGGGCATGA
Upstream 100 bases:
>100_bases CGCACGTCCACCAGGACCTGCGCGCCTTCGCCCGCGCGCTGCTCTCGCCCGCACATCATCCTCCCGGCGCGCCGTCGCGC GCGCCGACCGAACCCGCACC
Downstream 100 bases:
>100_bases AAGGGCGGCGACCACCGGCATCGCCCACCGCTGCCGCATCCGCGCAGCTGGAGCTGCCGCTGCTGGCGCCACCGGCCGCT CCGGATGCCGCCCCGCCGTC
Product: acyltransferase transmembrane protein
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTFVRSLLYLSFLIVWTPFYAVACFIAFPFMNPHRRFWMVTGWTKSAIWVARWLLGIRWQCQGWEHIEEAVATNKQVVLL SKHQSAWETIAFVAIMPRPLCYVFKRELLYVPFFGWALGMLKMVHINRKDGTNAFASVARQGKERMADGSWIIMFPEGTR TPVGAPNPRYKSGGARLAVDTGAWVIPIAHNSGRLWPRNAFLKYPGLITLSIGPAISSAGKSGDQLNREVQAWIEAEMRR IDADSYRERA
Sequences:
>Translated_250_residues MTFVRSLLYLSFLIVWTPFYAVACFIAFPFMNPHRRFWMVTGWTKSAIWVARWLLGIRWQCQGWEHIEEAVATNKQVVLL SKHQSAWETIAFVAIMPRPLCYVFKRELLYVPFFGWALGMLKMVHINRKDGTNAFASVARQGKERMADGSWIIMFPEGTR TPVGAPNPRYKSGGARLAVDTGAWVIPIAHNSGRLWPRNAFLKYPGLITLSIGPAISSAGKSGDQLNREVQAWIEAEMRR IDADSYRERA >Mature_249_residues TFVRSLLYLSFLIVWTPFYAVACFIAFPFMNPHRRFWMVTGWTKSAIWVARWLLGIRWQCQGWEHIEEAVATNKQVVLLS KHQSAWETIAFVAIMPRPLCYVFKRELLYVPFFGWALGMLKMVHINRKDGTNAFASVARQGKERMADGSWIIMFPEGTRT PVGAPNPRYKSGGARLAVDTGAWVIPIAHNSGRLWPRNAFLKYPGLITLSIGPAISSAGKSGDQLNREVQAWIEAEMRRI DADSYRERA
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Drosophila melanogaster, GI24641614, Length=193, Percent_Identity=25.9067357512953, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24641612, Length=193, Percent_Identity=25.9067357512953, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 28540; Mature: 28408
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFVRSLLYLSFLIVWTPFYAVACFIAFPFMNPHRRFWMVTGWTKSAIWVARWLLGIRWQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCEEE CQGWEHIEEAVATNKQVVLLSKHQSAWETIAFVAIMPRPLCYVFKRELLYVPFFGWALGM CCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHEECHHHHHHHH LKMVHINRKDGTNAFASVARQGKERMADGSWIIMFPEGTRTPVGAPNPRYKSGGARLAVD HHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE TGAWVIPIAHNSGRLWPRNAFLKYPGLITLSIGPAISSAGKSGDQLNREVQAWIEAEMRR CCCEEEEEECCCCCCCCCCCEEECCCEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHH IDADSYRERA CCCHHHHCCC >Mature Secondary Structure TFVRSLLYLSFLIVWTPFYAVACFIAFPFMNPHRRFWMVTGWTKSAIWVARWLLGIRWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCEEE CQGWEHIEEAVATNKQVVLLSKHQSAWETIAFVAIMPRPLCYVFKRELLYVPFFGWALGM CCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHEECHHHHHHHH LKMVHINRKDGTNAFASVARQGKERMADGSWIIMFPEGTRTPVGAPNPRYKSGGARLAVD HHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE TGAWVIPIAHNSGRLWPRNAFLKYPGLITLSIGPAISSAGKSGDQLNREVQAWIEAEMRR CCCEEEEEECCCCCCCCCCCEEECCCEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHH IDADSYRERA CCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9403685; 7812434 [H]