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The map label for this gene is glpQ [H]

Identifier: 17545221

GI number: 17545221

Start: 536021

End: 537157

Strand: Reverse

Name: glpQ [H]

Synonym: RSc0502

Alternate gene names: 17545221

Gene position: 537157-536021 (Counterclockwise)

Preceding gene: 17545222

Following gene: 17545220

Centisome position: 14.45

GC content: 68.69

Gene sequence:

>1137_bases
ATGCCGCGCCGCTTCGCTCTGCTGTGCCCGCTGATGTTGACGACCGCCATCGCACTGTCGGCCTGCCGGCTGGAATACAA
CCACGGCGGCAACCACGGCGACACCACGCCCATCGCCACCGTCCAGGTGATCGGCCATCGCGGCGCCCCGGCGTTGCGCC
CGGAGCACACGCTGGCGTCATACCAGAAGGCCATCGACGACGGCGCCGACATCATTGAGCCGGACCTCGTCGCCACCCAG
GACGGCGTGCTGGTCGCGCGCCACGAGAACGAGATCTCCGGCACCACCAACGTGGCCGACCTGCCGCAGTTCGCCGGCCG
CCGAGCCACCAAGACCATCGACGGCCAGAGCGTCACCGGCTGGTTCACGGAAGACTTCACGCTGGCCGAACTGAAGACCC
TGCGCGCCCGCGAGCGCATCCCCGACATCCGCCCGGACAACACGGCCTACAACGACCAGTTCGACATCCCGACGCTGTCC
GAGATCATCGCGCTCGCCCGCGACCAGTCGACCCTGCGCGGCCGCAACATCGGCCTCTACCCCGAGACCAAGCACCCGAC
CTATTTCCAGTCGATCGGCCTGCCGCTGGAAGACCGGCTGATCGCCGCGCTGCGCCAGGACGATTTCACGGCCAGCCGGA
CCACGGTCCATATCCAGTCGTTCGAAGTCGCCAACCTGAAGTCGATCCGCAACCGGATCGGCGGCAGCCAGCCCAACTGG
AAGCTCGTGCAGCTGCTGGGCACCGCCACCCAGCGCCCCTACGACTTCACGGTGGCCAACGACGCCCGCACCTACGCCGA
CCTGATGACCGACCAGGGCCTGCGCGACATCGCCGCCTATGCCAACGGCGTCGGGCCGGACAAGAACAGCGTGATCGCGC
TGGACGCCAACGGCGCGCTGACCGACCCCAGCGACCTCATCCGCAATGCCCACAGCGCCGGCCTCGTGGTGCATCCGTAC
ACGTTCCGGCCCGAGAACATCTTCCTGCCGGCCGCGCTGCGCAGTGGTGCGGACAACGCGCGCAACGTGAGCGGCTCGAT
CCAGGAAATCCAGGCCTTCCTGCGCGCGGGCGTCGACGGCTTCTTCACCGACGACCCGGCGGTCGGCCGGCAGGCCGTGG
ACACCCTCCAGCGCTAG

Upstream 100 bases:

>100_bases
GCTAAGCCGCGCGCGAGCGCTCCCCAAACGCCGGCTGGCTGGCACCGGGCAGCACGGCCGTCTACCATGCGGGAGACCCC
GTCTGCAGGAGGCCCCCCGG

Downstream 100 bases:

>100_bases
CGCCGGCCCGGCATCGGCTACACTGCGTGCCGTTTTGGGAGAACCTCATCCATGATCGGACGCATCGCCGGGACGCTGAT
CGAAAAGAACCCGCCGCACC

Product: glycerophosphoryl diester phosphodiesterase, periplasmic precursor protein

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MPRRFALLCPLMLTTAIALSACRLEYNHGGNHGDTTPIATVQVIGHRGAPALRPEHTLASYQKAIDDGADIIEPDLVATQ
DGVLVARHENEISGTTNVADLPQFAGRRATKTIDGQSVTGWFTEDFTLAELKTLRARERIPDIRPDNTAYNDQFDIPTLS
EIIALARDQSTLRGRNIGLYPETKHPTYFQSIGLPLEDRLIAALRQDDFTASRTTVHIQSFEVANLKSIRNRIGGSQPNW
KLVQLLGTATQRPYDFTVANDARTYADLMTDQGLRDIAAYANGVGPDKNSVIALDANGALTDPSDLIRNAHSAGLVVHPY
TFRPENIFLPAALRSGADNARNVSGSIQEIQAFLRAGVDGFFTDDPAVGRQAVDTLQR

Sequences:

>Translated_378_residues
MPRRFALLCPLMLTTAIALSACRLEYNHGGNHGDTTPIATVQVIGHRGAPALRPEHTLASYQKAIDDGADIIEPDLVATQ
DGVLVARHENEISGTTNVADLPQFAGRRATKTIDGQSVTGWFTEDFTLAELKTLRARERIPDIRPDNTAYNDQFDIPTLS
EIIALARDQSTLRGRNIGLYPETKHPTYFQSIGLPLEDRLIAALRQDDFTASRTTVHIQSFEVANLKSIRNRIGGSQPNW
KLVQLLGTATQRPYDFTVANDARTYADLMTDQGLRDIAAYANGVGPDKNSVIALDANGALTDPSDLIRNAHSAGLVVHPY
TFRPENIFLPAALRSGADNARNVSGSIQEIQAFLRAGVDGFFTDDPAVGRQAVDTLQR
>Mature_377_residues
PRRFALLCPLMLTTAIALSACRLEYNHGGNHGDTTPIATVQVIGHRGAPALRPEHTLASYQKAIDDGADIIEPDLVATQD
GVLVARHENEISGTTNVADLPQFAGRRATKTIDGQSVTGWFTEDFTLAELKTLRARERIPDIRPDNTAYNDQFDIPTLSE
IIALARDQSTLRGRNIGLYPETKHPTYFQSIGLPLEDRLIAALRQDDFTASRTTVHIQSFEVANLKSIRNRIGGSQPNWK
LVQLLGTATQRPYDFTVANDARTYADLMTDQGLRDIAAYANGVGPDKNSVIALDANGALTDPSDLIRNAHSAGLVVHPYT
FRPENIFLPAALRSGADNARNVSGSIQEIQAFLRAGVDGFFTDDPAVGRQAVDTLQR

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1788572, Length=350, Percent_Identity=30, Blast_Score=129, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 41282; Mature: 41151

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRFALLCPLMLTTAIALSACRLEYNHGGNHGDTTPIATVQVIGHRGAPALRPEHTLAS
CCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHH
YQKAIDDGADIIEPDLVATQDGVLVARHENEISGTTNVADLPQFAGRRATKTIDGQSVTG
HHHHHHCCCCCCCCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEECCCCCEEE
WFTEDFTLAELKTLRARERIPDIRPDNTAYNDQFDIPTLSEIIALARDQSTLRGRNIGLY
EECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCC
PETKHPTYFQSIGLPLEDRLIAALRQDDFTASRTTVHIQSFEVANLKSIRNRIGGSQPNW
CCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCH
KLVQLLGTATQRPYDFTVANDARTYADLMTDQGLRDIAAYANGVGPDKNSVIALDANGAL
HHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCC
TDPSDLIRNAHSAGLVVHPYTFRPENIFLPAALRSGADNARNVSGSIQEIQAFLRAGVDG
CCHHHHHHHHCCCCEEEECEEECCCCEEECHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC
FFTDDPAVGRQAVDTLQR
CCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PRRFALLCPLMLTTAIALSACRLEYNHGGNHGDTTPIATVQVIGHRGAPALRPEHTLAS
CCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHH
YQKAIDDGADIIEPDLVATQDGVLVARHENEISGTTNVADLPQFAGRRATKTIDGQSVTG
HHHHHHCCCCCCCCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEECCCCCEEE
WFTEDFTLAELKTLRARERIPDIRPDNTAYNDQFDIPTLSEIIALARDQSTLRGRNIGLY
EECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCC
PETKHPTYFQSIGLPLEDRLIAALRQDDFTASRTTVHIQSFEVANLKSIRNRIGGSQPNW
CCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCH
KLVQLLGTATQRPYDFTVANDARTYADLMTDQGLRDIAAYANGVGPDKNSVIALDANGAL
HHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCC
TDPSDLIRNAHSAGLVVHPYTFRPENIFLPAALRSGADNARNVSGSIQEIQAFLRAGVDG
CCHHHHHHHHCCCCEEEECEEECCCCEEECHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC
FFTDDPAVGRQAVDTLQR
CCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1851953; 9205837; 9278503; 3329281; 8899705 [H]