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The map label for this gene is spmB [H]

Identifier: 17545171

GI number: 17545171

Start: 480161

End: 481408

Strand: Direct

Name: spmB [H]

Synonym: RSc0452

Alternate gene names: 17545171

Gene position: 480161-481408 (Clockwise)

Preceding gene: 17545169

Following gene: 17545172

Centisome position: 12.92

GC content: 68.99

Gene sequence:

>1248_bases
GTGGCCCTCAACCTCGTCTGGCTCGCCTTCTTCCTCGTCGCCTTCGTCACCGCCTGCGTGCAGGTGGCGATGGGCGACAT
GGAGATCTTCGCCCGCATGCTCACCGGCATGTTCGACGCCGCGCGCACCGGCTTCGAGATCGCGCTCGGGCTGACCGGCA
TGATGGCGCTGTGGCTGGGCATCATGCGCGTCGGCGAGCGGGCAGGGGTGGTGGACCTGTTCGCCCGCCTGGTGAACCCG
CTGATGCGCCACCTGTTCCCATCGGTGCCGCCGGGCCACGCGGCCAACGGGGCGATGATGATGAACGTCTCGGCCAACGT
GCTGGGCCTGGACAATGCCGCCACGCCGCTCGGCCTGCAGGCCATGCGTGAGCTGCAGTCGATCAACCCGCAGCCGCGCC
GCGCCAGCGACGCGCAGCTGATGTTCGTCGTGCTCAACACCGCCGGCGTGACGCTGGTGCCCACCTCCGTGATCGCCATC
CGGCAGGCGCTGGCGGTCAAGCAGGGGCTGGCCGGCTTCAACGCGGCCGACATCTTCCTGCCGACGCTGCTGTCCACCTT
CGTCGGCTTCTGCGCGGGCATCGCCGCGGTGGCCTGGCATCAGCGCATCAACCTGTTTCGGCCGGCGCTGCTGGCGTACT
TCGGCGGCTTCGTCGCGGCGATGGGGCTGCTGTTCGCGTGGCTGCGCCAGTTTCCGCCCCAGCAGATGGCGGCGTGGATC
GGCCTGATCGGCGCGGGGGCCATCCTCACGATCGTGGTGGCGTTCCTGGCGTGCGGGGCGCTGCGGCGGATCAATGTCTA
CGAGACCTTCGTCGACGGCGCCAAGGACGGCTTCCAAGTGGCGATCGGCATCGTGCCGTACCTGGTGGCGGTGCTGGTCG
GCATCGCGGTGTTCCGCGCGGCGGGCTGCATGGAGTTCCTGATGCAGGGGCTGTCGGCGGCGTTCAGCCACCTGGGCATC
GATACGCGCTTCGTGCCGGCGCTGCCCGTGGGCCTGATGAAAACGCTGTCCGGCGCCGGTGCACGCGGCCTGATGGTGGA
CGTGATGACCACCTACGGCGTCGACTCCTTCCAGGGCAAGCTGGCCGCCATCATCCAGGGCTCGACCGAGACCACGTTCT
ACGTGCTGGCCGTGTATTTCGGCAGCGTGGGCATCAAGGACACGCGCTACGCGCTCGCCTGCGGGCTGTGGGCCGACCTG
ATCGGCCTGGTCGGCGCGGTGCTGATCGCCTACCTGTTCTTCGGCTGA

Upstream 100 bases:

>100_bases
ACCGTGATCCGGGCAGTATAGGTTGCCTTTTTGCGCTTGCCCGGCTGGCTTGGCGCGCAGGTCCGGCACAATAGGCGCTT
CCGTACTGCATGAATGCGCC

Downstream 100 bases:

>100_bases
GGCGCGCGGGCCGCCGGGGTGCGCCCCGAGCGACGCCATCGCCGCCCGGCCTCTACAATCGACCGCATGGAAACGTGGAT
CGCCTGGCTCCTCGCCACCC

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MALNLVWLAFFLVAFVTACVQVAMGDMEIFARMLTGMFDAARTGFEIALGLTGMMALWLGIMRVGERAGVVDLFARLVNP
LMRHLFPSVPPGHAANGAMMMNVSANVLGLDNAATPLGLQAMRELQSINPQPRRASDAQLMFVVLNTAGVTLVPTSVIAI
RQALAVKQGLAGFNAADIFLPTLLSTFVGFCAGIAAVAWHQRINLFRPALLAYFGGFVAAMGLLFAWLRQFPPQQMAAWI
GLIGAGAILTIVVAFLACGALRRINVYETFVDGAKDGFQVAIGIVPYLVAVLVGIAVFRAAGCMEFLMQGLSAAFSHLGI
DTRFVPALPVGLMKTLSGAGARGLMVDVMTTYGVDSFQGKLAAIIQGSTETTFYVLAVYFGSVGIKDTRYALACGLWADL
IGLVGAVLIAYLFFG

Sequences:

>Translated_415_residues
MALNLVWLAFFLVAFVTACVQVAMGDMEIFARMLTGMFDAARTGFEIALGLTGMMALWLGIMRVGERAGVVDLFARLVNP
LMRHLFPSVPPGHAANGAMMMNVSANVLGLDNAATPLGLQAMRELQSINPQPRRASDAQLMFVVLNTAGVTLVPTSVIAI
RQALAVKQGLAGFNAADIFLPTLLSTFVGFCAGIAAVAWHQRINLFRPALLAYFGGFVAAMGLLFAWLRQFPPQQMAAWI
GLIGAGAILTIVVAFLACGALRRINVYETFVDGAKDGFQVAIGIVPYLVAVLVGIAVFRAAGCMEFLMQGLSAAFSHLGI
DTRFVPALPVGLMKTLSGAGARGLMVDVMTTYGVDSFQGKLAAIIQGSTETTFYVLAVYFGSVGIKDTRYALACGLWADL
IGLVGAVLIAYLFFG
>Mature_414_residues
ALNLVWLAFFLVAFVTACVQVAMGDMEIFARMLTGMFDAARTGFEIALGLTGMMALWLGIMRVGERAGVVDLFARLVNPL
MRHLFPSVPPGHAANGAMMMNVSANVLGLDNAATPLGLQAMRELQSINPQPRRASDAQLMFVVLNTAGVTLVPTSVIAIR
QALAVKQGLAGFNAADIFLPTLLSTFVGFCAGIAAVAWHQRINLFRPALLAYFGGFVAAMGLLFAWLRQFPPQQMAAWIG
LIGAGAILTIVVAFLACGALRRINVYETFVDGAKDGFQVAIGIVPYLVAVLVGIAVFRAAGCMEFLMQGLSAAFSHLGID
TRFVPALPVGLMKTLSGAGARGLMVDVMTTYGVDSFQGKLAAIIQGSTETTFYVLAVYFGSVGIKDTRYALACGLWADLI
GLVGAVLIAYLFFG

Specific function: Involved in spore core dehydration; might be involved in the transport of something into or out of the forespore or could be required for some modification of the cortex peptidoglycan structure [H]

COG id: COG2715

COG function: function code R; Uncharacterized membrane protein, required for spore maturation in B.subtilis.

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spmB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 44038; Mature: 43907

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNLVWLAFFLVAFVTACVQVAMGDMEIFARMLTGMFDAARTGFEIALGLTGMMALWLG
CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IMRVGERAGVVDLFARLVNPLMRHLFPSVPPGHAANGAMMMNVSANVLGLDNAATPLGLQ
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCCHHHH
AMRELQSINPQPRRASDAQLMFVVLNTAGVTLVPTSVIAIRQALAVKQGLAGFNAADIFL
HHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHH
PTLLSTFVGFCAGIAAVAWHQRINLFRPALLAYFGGFVAAMGLLFAWLRQFPPQQMAAWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GLIGAGAILTIVVAFLACGALRRINVYETFVDGAKDGFQVAIGIVPYLVAVLVGIAVFRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGCMEFLMQGLSAAFSHLGIDTRFVPALPVGLMKTLSGAGARGLMVDVMTTYGVDSFQGK
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHCCH
LAAIIQGSTETTFYVLAVYFGSVGIKDTRYALACGLWADLIGLVGAVLIAYLFFG
HHHEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALNLVWLAFFLVAFVTACVQVAMGDMEIFARMLTGMFDAARTGFEIALGLTGMMALWLG
CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IMRVGERAGVVDLFARLVNPLMRHLFPSVPPGHAANGAMMMNVSANVLGLDNAATPLGLQ
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCCHHHH
AMRELQSINPQPRRASDAQLMFVVLNTAGVTLVPTSVIAIRQALAVKQGLAGFNAADIFL
HHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHH
PTLLSTFVGFCAGIAAVAWHQRINLFRPALLAYFGGFVAAMGLLFAWLRQFPPQQMAAWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GLIGAGAILTIVVAFLACGALRRINVYETFVDGAKDGFQVAIGIVPYLVAVLVGIAVFRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGCMEFLMQGLSAAFSHLGIDTRFVPALPVGLMKTLSGAGARGLMVDVMTTYGVDSFQGK
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHCCH
LAAIIQGSTETTFYVLAVYFGSVGIKDTRYALACGLWADLIGLVGAVLIAYLFFG
HHHEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 1548223; 7642500 [H]