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The map label for this gene is yqaA [H]

Identifier: 17545172

GI number: 17545172

Start: 481475

End: 482056

Strand: Direct

Name: yqaA [H]

Synonym: RSc0453

Alternate gene names: 17545172

Gene position: 481475-482056 (Clockwise)

Preceding gene: 17545171

Following gene: 17545173

Centisome position: 12.96

GC content: 68.56

Gene sequence:

>582_bases
ATGGAAACGTGGATCGCCTGGCTCCTCGCCACCCTGGCCCTGCCCAACGTGGGGCTGCCCGCCATCTTCATCGTCTGCTT
TGTCTCGGCGACGCTGCTGCCGCTGGGGTCCGAGCCGGCGGTGTTCGGCTACATCAAGCTCAATCCCGAGATGTTCTGGC
CGGCCATCTTCGTGGCGGCCGCCGGCAATACGCTGGGCGGCGCGGTCGACTGGTGGATGGGCTATGCGGCCAAGCTGGCG
CTGGTGCGGTTCCACCTGGCGCGCCGCCGCCGCCAGCACGACACCGAGCACGTGCAGCACATCCCGCACCCGCAGCGCCA
CCGCGCCCCGCCGCTGGACAAGAAATACTTCCGCTGGATGCGCCGCATCGGCCCGGTGTCGCTGCTGGCGTCGTGGGTGC
CCGGCATCGGCGATCCGCTGTGCACGCTGGCCGGCTGGCTGCGGCTGTCCTTCTGGCCCAGCGTGGCCTACATGGCGATC
GGCAAGTTCCTGCGCTACCTGGTCATGACCGCCGCGCTGTTGACCCTGCCGGACCGTTTCTGGCACGGCATCTTCGGGTG
GATCAAGACGCTCCTGATGTGA

Upstream 100 bases:

>100_bases
CGCGGTGCTGATCGCCTACCTGTTCTTCGGCTGAGGCGCGCGGGCCGCCGGGGTGCGCCCCGAGCGACGCCATCGCCGCC
CGGCCTCTACAATCGACCGC

Downstream 100 bases:

>100_bases
CTTTTCGTCCTCTTCATCGGGTCCGCCGCGCGCCGGTATTTCCGCAACCCGTTGAAAACGCGATGGTTTTGGCGCCCATG
TTCGGTGCAGGGATACCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
METWIAWLLATLALPNVGLPAIFIVCFVSATLLPLGSEPAVFGYIKLNPEMFWPAIFVAAAGNTLGGAVDWWMGYAAKLA
LVRFHLARRRRQHDTEHVQHIPHPQRHRAPPLDKKYFRWMRRIGPVSLLASWVPGIGDPLCTLAGWLRLSFWPSVAYMAI
GKFLRYLVMTAALLTLPDRFWHGIFGWIKTLLM

Sequences:

>Translated_193_residues
METWIAWLLATLALPNVGLPAIFIVCFVSATLLPLGSEPAVFGYIKLNPEMFWPAIFVAAAGNTLGGAVDWWMGYAAKLA
LVRFHLARRRRQHDTEHVQHIPHPQRHRAPPLDKKYFRWMRRIGPVSLLASWVPGIGDPLCTLAGWLRLSFWPSVAYMAI
GKFLRYLVMTAALLTLPDRFWHGIFGWIKTLLM
>Mature_193_residues
METWIAWLLATLALPNVGLPAIFIVCFVSATLLPLGSEPAVFGYIKLNPEMFWPAIFVAAAGNTLGGAVDWWMGYAAKLA
LVRFHLARRRRQHDTEHVQHIPHPQRHRAPPLDKKYFRWMRRIGPVSLLASWVPGIGDPLCTLAGWLRLSFWPSVAYMAI
GKFLRYLVMTAALLTLPDRFWHGIFGWIKTLLM

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=156, Percent_Identity=32.0512820512821, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21945; Mature: 21945

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METWIAWLLATLALPNVGLPAIFIVCFVSATLLPLGSEPAVFGYIKLNPEMFWPAIFVAA
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHH
AGNTLGGAVDWWMGYAAKLALVRFHLARRRRQHDTEHVQHIPHPQRHRAPPLDKKYFRWM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHCCCCCCCHHHHHHH
RRIGPVSLLASWVPGIGDPLCTLAGWLRLSFWPSVAYMAIGKFLRYLVMTAALLTLPDRF
HHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WHGIFGWIKTLLM
HHHHHHHHHHHHC
>Mature Secondary Structure
METWIAWLLATLALPNVGLPAIFIVCFVSATLLPLGSEPAVFGYIKLNPEMFWPAIFVAA
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHH
AGNTLGGAVDWWMGYAAKLALVRFHLARRRRQHDTEHVQHIPHPQRHRAPPLDKKYFRWM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHCCCCCCCHHHHHHH
RRIGPVSLLASWVPGIGDPLCTLAGWLRLSFWPSVAYMAIGKFLRYLVMTAALLTLPDRF
HHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WHGIFGWIKTLLM
HHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]