| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ilvA [H]
Identifier: 17545168
GI number: 17545168
Start: 476953
End: 478476
Strand: Reverse
Name: ilvA [H]
Synonym: RSc0449
Alternate gene names: 17545168
Gene position: 478476-476953 (Counterclockwise)
Preceding gene: 17545170
Following gene: 17545167
Centisome position: 12.87
GC content: 66.93
Gene sequence:
>1524_bases ATGGCCATCGACTATCTCAAGAAGATCCTGACCGCCAAGGTCTACGACGTCGCGCAGGAAACCGACCTGCAGCCCGCGCC CAGCCTGTCGGCACGCATCGGCAACCGCGTGTACCTCAAGCGCGAAGACAACCAGCCGGTGTTCTCGTTCAAGCTGCGCG GCGCCTACAACAAGATGGCGTCGCTGACGCCGGCCGAGCGCAAGCGGGGCGTGATTACGGCATCGGCGGGCAACCATGCG CAGGGCGTGGCGTTCAGCGCCGCCCGGCTCGGCTGCAAGGCGGTCATCACCATGCCGGTGACGACGCCGCAGCTGAAGAT CGACGGCGTGCGCTCGCGCGGCGGCGAGTGGGTCGAGATCGTGCTGCACGGCGAAAGCTATACGGATGCGTACGACCACG CCGTCAAGCTGCAGGAGAAGCACGGCTACACCTTCGTCCACCCGTTCGACGATCCGGAGGTGATCGCGGGCCAGGGCACC ATTGCCGTGGAGATCCTGCGCCAGCATCCGGAGCCGATCCACGCCATCTTCGCGGCGATCGGCGGCGGCGGGCTGGTGTC GGGCATCGCGGCCTACGTGAAGGCGGTGCGCCCGGACATCAAGGTGATCGGCGTGCAGACGGCGGATTCCGATGCGATGG CCTGCTCGGTGGCGGCCGGCAAGCGGGTGACGCTGCGGGACGTGGGCCTGTTCTCGGACGGCACGGCGGTCAAGCTGGTC GGCAAGGAAACCTTCCGCCTGACCCGCGAACTGGTCGACGAGATCATCACCGTGGACACCGACGCCATCTGCGCGGCGCT CAAGGACGTGTTCCAGGACACCCGCAGCGTGCTGGAGCCGGCGGGCGCGCTGGCGCTGGCCGGGCTCAAGCAGTACGCGG CGGACCGCAAGCTCAAGAGCCAGTCGCTGGTGGCGATCGCGTCCGGCGCCAACATGAACTTCGACCGCCTGCGCTTCGTG GCCGAGCGCGCCGAGGTGGGCGAGGCGCGCGAAGCCGTGTTCGCGGTGACGATTCCGGAGGAGCGCGGCAGCTTCAGGCG CTTCTGCGAGGTGGTCGGCTGGTCGCGCAGCGTGACCGAGTTCAACTACCGCATCGCCGACAAGAACGAGGCGCACATCT TCGTGGGCGTGCAGATCGCCTCGCGCGCCGAGGGCGACAAGATCGCCGACGGCTTCCGCAAGCACGGCTTCCCGACGCTG GACCTGTCCAACGACGAACTGGCCAAGCAGCACATCCGCTACATGGTGGGCGGGCATTCGCCGCTGGCCGAGAACGAGCT GCTGTACCGCTTCGAGTTTCCCGAGCGGCCCGGCGCGCTGATAAAGTTCCTCTCGAGCATGAGCCCGAACTGGAACATCA GCCTGTTCCACTACCGCAACCAGGGCGCGGATTCGAGCAACATCCTGGTCGGCATCCAGGTGCCGAAGAACGAGAAGCGC GCGTTCAAGGCCTTCCTCGCCACGCTCGGCTACACGTTCTGGGACGAAAGCGAGAACCCGGTCTACGGACTGTTCCTGCG CTGA
Upstream 100 bases:
>100_bases CCCGGGCGGCCGGGGCAGTGTACCGACCGGTCCGGCCCTGGCACAAGACGCCGCGTGATAGGCTTATGGGCTGTCCTCCG TCCAACCCGGTCCCCGCATC
Downstream 100 bases:
>100_bases TCCCATCCGTTGCCGTGGAGTCTTCCGCATGAGCCATCCCGAACACTCACCGCTGGGCAAGGCCTCGGCCTACAAGACGC AGTACGACCCGAGCCTGCTG
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MAIDYLKKILTAKVYDVAQETDLQPAPSLSARIGNRVYLKREDNQPVFSFKLRGAYNKMASLTPAERKRGVITASAGNHA QGVAFSAARLGCKAVITMPVTTPQLKIDGVRSRGGEWVEIVLHGESYTDAYDHAVKLQEKHGYTFVHPFDDPEVIAGQGT IAVEILRQHPEPIHAIFAAIGGGGLVSGIAAYVKAVRPDIKVIGVQTADSDAMACSVAAGKRVTLRDVGLFSDGTAVKLV GKETFRLTRELVDEIITVDTDAICAALKDVFQDTRSVLEPAGALALAGLKQYAADRKLKSQSLVAIASGANMNFDRLRFV AERAEVGEAREAVFAVTIPEERGSFRRFCEVVGWSRSVTEFNYRIADKNEAHIFVGVQIASRAEGDKIADGFRKHGFPTL DLSNDELAKQHIRYMVGGHSPLAENELLYRFEFPERPGALIKFLSSMSPNWNISLFHYRNQGADSSNILVGIQVPKNEKR AFKAFLATLGYTFWDESENPVYGLFLR
Sequences:
>Translated_507_residues MAIDYLKKILTAKVYDVAQETDLQPAPSLSARIGNRVYLKREDNQPVFSFKLRGAYNKMASLTPAERKRGVITASAGNHA QGVAFSAARLGCKAVITMPVTTPQLKIDGVRSRGGEWVEIVLHGESYTDAYDHAVKLQEKHGYTFVHPFDDPEVIAGQGT IAVEILRQHPEPIHAIFAAIGGGGLVSGIAAYVKAVRPDIKVIGVQTADSDAMACSVAAGKRVTLRDVGLFSDGTAVKLV GKETFRLTRELVDEIITVDTDAICAALKDVFQDTRSVLEPAGALALAGLKQYAADRKLKSQSLVAIASGANMNFDRLRFV AERAEVGEAREAVFAVTIPEERGSFRRFCEVVGWSRSVTEFNYRIADKNEAHIFVGVQIASRAEGDKIADGFRKHGFPTL DLSNDELAKQHIRYMVGGHSPLAENELLYRFEFPERPGALIKFLSSMSPNWNISLFHYRNQGADSSNILVGIQVPKNEKR AFKAFLATLGYTFWDESENPVYGLFLR >Mature_506_residues AIDYLKKILTAKVYDVAQETDLQPAPSLSARIGNRVYLKREDNQPVFSFKLRGAYNKMASLTPAERKRGVITASAGNHAQ GVAFSAARLGCKAVITMPVTTPQLKIDGVRSRGGEWVEIVLHGESYTDAYDHAVKLQEKHGYTFVHPFDDPEVIAGQGTI AVEILRQHPEPIHAIFAAIGGGGLVSGIAAYVKAVRPDIKVIGVQTADSDAMACSVAAGKRVTLRDVGLFSDGTAVKLVG KETFRLTRELVDEIITVDTDAICAALKDVFQDTRSVLEPAGALALAGLKQYAADRKLKSQSLVAIASGANMNFDRLRFVA ERAEVGEAREAVFAVTIPEERGSFRRFCEVVGWSRSVTEFNYRIADKNEAHIFVGVQIASRAEGDKIADGFRKHGFPTLD LSNDELAKQHIRYMVGGHSPLAENELLYRFEFPERPGALIKFLSSMSPNWNISLFHYRNQGADSSNILVGIQVPKNEKRA FKAFLATLGYTFWDESENPVYGLFLR
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=291, Percent_Identity=33.6769759450172, Blast_Score=143, Evalue=5e-34, Organism=Homo sapiens, GI33469958, Length=319, Percent_Identity=30.7210031347962, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI19923959, Length=320, Percent_Identity=26.875, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1790207, Length=504, Percent_Identity=52.1825396825397, Blast_Score=496, Evalue=1e-141, Organism=Escherichia coli, GI1789505, Length=320, Percent_Identity=37.5, Blast_Score=182, Evalue=4e-47, Organism=Caenorhabditis elegans, GI71991565, Length=334, Percent_Identity=30.8383233532934, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17537387, Length=337, Percent_Identity=31.4540059347181, Blast_Score=128, Evalue=7e-30, Organism=Caenorhabditis elegans, GI17508781, Length=257, Percent_Identity=32.6848249027237, Blast_Score=123, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6320930, Length=519, Percent_Identity=47.3988439306358, Blast_Score=458, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6322631, Length=306, Percent_Identity=32.6797385620915, Blast_Score=139, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6319788, Length=302, Percent_Identity=25.8278145695364, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI21355833, Length=328, Percent_Identity=30.4878048780488, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI24645328, Length=252, Percent_Identity=28.968253968254, Blast_Score=84, Evalue=3e-16,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 55667; Mature: 55536
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDYLKKILTAKVYDVAQETDLQPAPSLSARIGNRVYLKREDNQPVFSFKLRGAYNKMA CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEECCCCCEEEEEECCHHHHHH SLTPAERKRGVITASAGNHAQGVAFSAARLGCKAVITMPVTTPQLKIDGVRSRGGEWVEI CCCHHHHHCCEEEECCCCCCCCEEEHHHHCCCEEEEEECCCCCCEEECCHHCCCCCEEEE VLHGESYTDAYDHAVKLQEKHGYTFVHPFDDPEVIAGQGTIAVEILRQHPEPIHAIFAAI EEECCCCCCHHHHHEEEECCCCEEEEECCCCCCEEECCCCEEEHHHHHCCCHHHHHHHHH GGGGLVSGIAAYVKAVRPDIKVIGVQTADSDAMACSVAAGKRVTLRDVGLFSDGTAVKLV CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCEEEEEECCEECCCCEEEEE GKETFRLTRELVDEIITVDTDAICAALKDVFQDTRSVLEPAGALALAGLKQYAADRKLKS CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC QSLVAIASGANMNFDRLRFVAERAEVGEAREAVFAVTIPEERGSFRRFCEVVGWSRSVTE CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHCCHHHHHHHHHCCCCCEEE FNYRIADKNEAHIFVGVQIASRAEGDKIADGFRKHGFPTLDLSNDELAKQHIRYMVGGHS EEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCC PLAENELLYRFEFPERPGALIKFLSSMSPNWNISLFHYRNQGADSSNILVGIQVPKNEKR CCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHH AFKAFLATLGYTFWDESENPVYGLFLR HHHHHHHHHCCCEECCCCCCEEEEEEC >Mature Secondary Structure AIDYLKKILTAKVYDVAQETDLQPAPSLSARIGNRVYLKREDNQPVFSFKLRGAYNKMA CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEECCCCCEEEEEECCHHHHHH SLTPAERKRGVITASAGNHAQGVAFSAARLGCKAVITMPVTTPQLKIDGVRSRGGEWVEI CCCHHHHHCCEEEECCCCCCCCEEEHHHHCCCEEEEEECCCCCCEEECCHHCCCCCEEEE VLHGESYTDAYDHAVKLQEKHGYTFVHPFDDPEVIAGQGTIAVEILRQHPEPIHAIFAAI EEECCCCCCHHHHHEEEECCCCEEEEECCCCCCEEECCCCEEEHHHHHCCCHHHHHHHHH GGGGLVSGIAAYVKAVRPDIKVIGVQTADSDAMACSVAAGKRVTLRDVGLFSDGTAVKLV CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCEEEEEECCEECCCCEEEEE GKETFRLTRELVDEIITVDTDAICAALKDVFQDTRSVLEPAGALALAGLKQYAADRKLKS CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC QSLVAIASGANMNFDRLRFVAERAEVGEAREAVFAVTIPEERGSFRRFCEVVGWSRSVTE CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHCCHHHHHHHHHCCCCCEEE FNYRIADKNEAHIFVGVQIASRAEGDKIADGFRKHGFPTLDLSNDELAKQHIRYMVGGHS EEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCC PLAENELLYRFEFPERPGALIKFLSSMSPNWNISLFHYRNQGADSSNILVGIQVPKNEKR CCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHH AFKAFLATLGYTFWDESENPVYGLFLR HHHHHHHHHCCCEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA