| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is apt [H]
Identifier: 17545136
GI number: 17545136
Start: 444221
End: 444916
Strand: Direct
Name: apt [H]
Synonym: RSc0417
Alternate gene names: 17545136
Gene position: 444221-444916 (Clockwise)
Preceding gene: 17545133
Following gene: 17545137
Centisome position: 11.95
GC content: 67.82
Gene sequence:
>696_bases ATGGCGGCTGCCGTGCACCGTGCCTGCCGCATTGTGGTGCGGCGCCATCCGGGCCGGGTGGTAGCCGGCTACCGCATCGC CTTTTCTCTTTCTGTTTCAGCAATGACCGACGCCAGCATCTCTCCGTCCTCGCCCGTTCCTGCCTCGACCGAACTGGGCG ATGTGACGCGCTACCTGCGCGAGCGCATCCGCACCGTGCCCGACTGGCCGCAGCTGGGGGTGATGTTCCGCGACATCACG CCGCTGCTGCAGGACCCGAAGAGCCTGCGCGTGCTGGTGGACGTGTTCGTCCATCGCTATATGGGACAGGGGCTGAACCT GGTGGCGGGCATCGATGCGCGCGGCTTCATCCTCGGCTCCATCGTCGCGTACGAGCTGAACCTGGGCTTCGTGCCGATCC GCAAGAAGGGCAAGCTGCCGTTCACCACCGTGGCCGAGGAGTACATGCTGGAGTACGGCAGCGCCACGGTGGAGATCCAC GCCGACGCCTGCAAGCCCGGCGACCGCGTGCTGCTGATCGACGACCTGATCGCCACCGGCGGCACCATGATGGCCGGCAA GCGCCTGCTGGAGCGGCTGGGCGCGACGGTGGTGGAGGGCGCGGCCATCGTCGACCTGCCCGAACTGGGTGGCTCGCGCC TGCTGATGGACGGCGGCCTGCCGCTCTTTACCGTGTGCCGCTTCGACGGGCATTGA
Upstream 100 bases:
>100_bases CCTGGAAGGGCACCATGACTTCGTAGTCTTCGACATAGTCGCCCACCAGCATCAGAATCTTCTTCGCCATCGTCGTCTCC TGTATGGTTGCAGTTTGTGC
Downstream 100 bases:
>100_bases TGGCCGCCGGCGATGCCCTGGCCGCATCCCTTGGTGTCACCGCAACAAGACGCCGCCGCGCGCCGCGCGGTGGTGTGGCC TTTTGATGAGAGGACAACGA
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT [H]
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAAAVHRACRIVVRRHPGRVVAGYRIAFSLSVSAMTDASISPSSPVPASTELGDVTRYLRERIRTVPDWPQLGVMFRDIT PLLQDPKSLRVLVDVFVHRYMGQGLNLVAGIDARGFILGSIVAYELNLGFVPIRKKGKLPFTTVAEEYMLEYGSATVEIH ADACKPGDRVLLIDDLIATGGTMMAGKRLLERLGATVVEGAAIVDLPELGGSRLLMDGGLPLFTVCRFDGH
Sequences:
>Translated_231_residues MAAAVHRACRIVVRRHPGRVVAGYRIAFSLSVSAMTDASISPSSPVPASTELGDVTRYLRERIRTVPDWPQLGVMFRDIT PLLQDPKSLRVLVDVFVHRYMGQGLNLVAGIDARGFILGSIVAYELNLGFVPIRKKGKLPFTTVAEEYMLEYGSATVEIH ADACKPGDRVLLIDDLIATGGTMMAGKRLLERLGATVVEGAAIVDLPELGGSRLLMDGGLPLFTVCRFDGH >Mature_230_residues AAAVHRACRIVVRRHPGRVVAGYRIAFSLSVSAMTDASISPSSPVPASTELGDVTRYLRERIRTVPDWPQLGVMFRDITP LLQDPKSLRVLVDVFVHRYMGQGLNLVAGIDARGFILGSIVAYELNLGFVPIRKKGKLPFTTVAEEYMLEYGSATVEIHA DACKPGDRVLLIDDLIATGGTMMAGKRLLERLGATVVEGAAIVDLPELGGSRLLMDGGLPLFTVCRFDGH
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4502171, Length=176, Percent_Identity=44.3181818181818, Blast_Score=147, Evalue=7e-36, Organism=Homo sapiens, GI71773201, Length=127, Percent_Identity=47.244094488189, Blast_Score=122, Evalue=4e-28, Organism=Escherichia coli, GI1786675, Length=175, Percent_Identity=47.4285714285714, Blast_Score=179, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17509087, Length=174, Percent_Identity=43.1034482758621, Blast_Score=126, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6323619, Length=180, Percent_Identity=32.7777777777778, Blast_Score=97, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6320649, Length=175, Percent_Identity=29.1428571428571, Blast_Score=76, Evalue=5e-15, Organism=Drosophila melanogaster, GI17136334, Length=164, Percent_Identity=40.8536585365854, Blast_Score=127, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005764 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.7 [H]
Molecular weight: Translated: 25045; Mature: 24913
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAVHRACRIVVRRHPGRVVAGYRIAFSLSVSAMTDASISPSSPVPASTELGDVTRYLR CCHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEHEECCCCCCCCCCCCCCHHHHHHHHHH ERIRTVPDWPQLGVMFRDITPLLQDPKSLRVLVDVFVHRYMGQGLNLVAGIDARGFILGS HHHHCCCCCHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH IVAYELNLGFVPIRKKGKLPFTTVAEEYMLEYGSATVEIHADACKPGDRVLLIDDLIATG EEEEEECCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEHHHHCC GTMMAGKRLLERLGATVVEGAAIVDLPELGGSRLLMDGGLPLFTVCRFDGH CHHHHHHHHHHHHCHHHHCCEEEEECCCCCCCEEEEECCCCEEEEEEECCC >Mature Secondary Structure AAAVHRACRIVVRRHPGRVVAGYRIAFSLSVSAMTDASISPSSPVPASTELGDVTRYLR CHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEHEECCCCCCCCCCCCCCHHHHHHHHHH ERIRTVPDWPQLGVMFRDITPLLQDPKSLRVLVDVFVHRYMGQGLNLVAGIDARGFILGS HHHHCCCCCHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH IVAYELNLGFVPIRKKGKLPFTTVAEEYMLEYGSATVEIHADACKPGDRVLLIDDLIATG EEEEEECCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEHHHHCC GTMMAGKRLLERLGATVVEGAAIVDLPELGGSRLLMDGGLPLFTVCRFDGH CHHHHHHHHHHHHCHHHHCCEEEEECCCCCCCEEEEECCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]