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The map label for this gene is ftsY [H]

Identifier: 17545105

GI number: 17545105

Start: 413924

End: 414910

Strand: Reverse

Name: ftsY [H]

Synonym: RSc0386

Alternate gene names: 17545105

Gene position: 414910-413924 (Counterclockwise)

Preceding gene: 17545111

Following gene: 17545101

Centisome position: 11.16

GC content: 69.2

Gene sequence:

>987_bases
GTGCCGGATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGT
GGAGCAGGCGCGCAAGGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCG
TCGGCGTGAAGGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACC
GAGTACCTGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCG
CGACCTGCTCATCGAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCG
CGGGCGTCAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTG
CTGGCCGCCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGT
GGCGCAGGAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCA
TGGCCGACACCGCCGGCCGCCTTCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAA
GCGATGGCGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGC
CTTCGACGATGCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCA
TCGCGCGGCAGCGGCCGGTGCCGGTATATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGC
GAATTCGCCGACGCGCTGCTGGGCTAA

Upstream 100 bases:

>100_bases
GGCGCCGCCCGCCGCCGCGCCCGAAGCCGCACAGGCTCCTGCTCCTGCCCCGGCCCCGGTTGCCGCCCCCGTCCCCACGC
CGGCTCCCGCCCCGGTCGCC

Downstream 100 bases:

>100_bases
CCGCCCATCAGCAGCGTCAGCGCGATCGCCCACATCACCGCGCCGATCAGCGCATCGAGCACCCGCCAGGCGACCGGCCT
GGCGAACACCGGCTCCAGCA

Product: cell division protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MPDTPAAPAALDMQADDIETVPTPPVVEQARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDAT
EYLLDELRRRVKAQRIETAEGVKTALRDLLIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVL
LAAGDTFRAAAREQLVIWGQRNNVTVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGK
AMATAPHETLLVIDANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAR
EFADALLG

Sequences:

>Translated_328_residues
MPDTPAAPAALDMQADDIETVPTPPVVEQARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDAT
EYLLDELRRRVKAQRIETAEGVKTALRDLLIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVL
LAAGDTFRAAAREQLVIWGQRNNVTVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGK
AMATAPHETLLVIDANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAR
EFADALLG
>Mature_327_residues
PDTPAAPAALDMQADDIETVPTPPVVEQARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATE
YLLDELRRRVKAQRIETAEGVKTALRDLLIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLL
AAGDTFRAAAREQLVIWGQRNNVTVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKA
MATAPHETLLVIDANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSARE
FADALLG

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=285, Percent_Identity=33.3333333333333, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI226371618, Length=229, Percent_Identity=34.9344978165939, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI295424842, Length=353, Percent_Identity=29.7450424929178, Blast_Score=104, Evalue=9e-23,
Organism=Homo sapiens, GI23308697, Length=353, Percent_Identity=29.7450424929178, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI89061728, Length=137, Percent_Identity=38.6861313868613, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI1789874, Length=302, Percent_Identity=50.6622516556291, Blast_Score=288, Evalue=2e-79,
Organism=Escherichia coli, GI1788963, Length=273, Percent_Identity=34.0659340659341, Blast_Score=146, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17539958, Length=273, Percent_Identity=29.6703296703297, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI193206261, Length=334, Percent_Identity=29.3413173652695, Blast_Score=109, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=306, Percent_Identity=31.6993464052288, Blast_Score=137, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=320, Percent_Identity=25.625, Blast_Score=89, Evalue=9e-19,
Organism=Drosophila melanogaster, GI17647949, Length=279, Percent_Identity=32.9749103942652, Blast_Score=138, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24641198, Length=263, Percent_Identity=29.6577946768061, Blast_Score=93, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 35156; Mature: 35025

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDTPAAPAALDMQADDIETVPTPPVVEQARKGWMSRLRSGLSKTSKSLTTLFVGVKVDE
CCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHH
ALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDLLIELLHPLEKT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQ
HHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHCCCEEEEEEC
RNNVTVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGK
CCCEEEEEECCCCCEEEEEHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
AMATAPHETLLVIDANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPV
HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCC
PVYFIGVGEQVEDLQPFSAREFADALLG
CEEEEECCCCHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure 
PDTPAAPAALDMQADDIETVPTPPVVEQARKGWMSRLRSGLSKTSKSLTTLFVGVKVDE
CCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHH
ALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDLLIELLHPLEKT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQ
HHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHCCCEEEEEEC
RNNVTVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGK
CCCEEEEEECCCCCEEEEEHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
AMATAPHETLLVIDANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPV
HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCC
PVYFIGVGEQVEDLQPFSAREFADALLG
CEEEEECCCCHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]