Click here to switch to the map view.

The map label for this gene is 17545111

Identifier: 17545111

GI number: 17545111

Start: 419770

End: 420450

Strand: Reverse

Name: 17545111

Synonym: RSc0392

Alternate gene names: NA

Gene position: 420450-419770 (Counterclockwise)

Preceding gene: 17545112

Following gene: 17545105

Centisome position: 11.31

GC content: 72.98

Gene sequence:

>681_bases
ATGAAGCCACCCATCCCGTCGTCCCGCCCCCGTGCGCCGATTGCGCTCGCACTCGGCCTATGGGCCGCGGCGACGGCCCT
GCCCGCCGCCGGCGAGGTCTATCGTTGCACCGAGAACGGCCAGACGGTGTACTCCGACCATCCCTGCGGATCGCGCGCCG
TGACCGTGCCGCTGCTCGACAGCACGCCGAGCGCAGCCGACCAGAAGGCCGCGCGCGAACGCGCTGCCGACGAAGCGGTA
CAGGTGCGCGAGGCACAGACCGCCCGCCGCAAGGCCCAGGCGGCAGAAGACGCACGCCTTGCCGCCGAGACACGCCTTGC
CGCCGAAGCCGCCGAGCAGGCGCGGCGCGATCAGGAACGCGCCCGGCGGGTGCAGCAGGACGTGGGCGCGCGCTATTGCC
ATCGGGTCTACGTTGGCCCGATGCCGTATCCGTACCCGGTCCCGATGGTGACGCCGCCGGCGCCGATTCCGACACCGATT
CCGACACCGATGCCGCGCATCGTCCCGGGGCAACAGGCCGGCAACAGCGGCGGCAAGCCGCTGCCGTTCGTGCAGGCGCC
CGTCACCCGCCCCGCGCCGATCGTGCCGCGCCCGCCGCACCTGCATCCGCCGGCCTACCGCATCGTCTGCGAGCCGGGCT
ACGTGTACGACGGGCCGGAGGACCTGCTGCCGGTTGAATGA

Upstream 100 bases:

>100_bases
CCTCGATGCGCTGCCGGACCTGGTTGCCGGCAACGCCGAGCGCGCCATGATGCGCCTGCACACCACAGGCTGACGCGCCA
GCCGCGCGCAGGACACCGCC

Downstream 100 bases:

>100_bases
GGGAGCGGGCGCATCCACGAAAAAAAAGAGACGGCCGGAACCGTCTCTTTTTTTGCGTGCGCCGCGCGCTAGGCAGCGGT
CAACTTGAGGTACTTCTGCA

Product: prolin-rich transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKPPIPSSRPRAPIALALGLWAAATALPAAGEVYRCTENGQTVYSDHPCGSRAVTVPLLDSTPSAADQKAARERAADEAV
QVREAQTARRKAQAAEDARLAAETRLAAEAAEQARRDQERARRVQQDVGARYCHRVYVGPMPYPYPVPMVTPPAPIPTPI
PTPMPRIVPGQQAGNSGGKPLPFVQAPVTRPAPIVPRPPHLHPPAYRIVCEPGYVYDGPEDLLPVE

Sequences:

>Translated_226_residues
MKPPIPSSRPRAPIALALGLWAAATALPAAGEVYRCTENGQTVYSDHPCGSRAVTVPLLDSTPSAADQKAARERAADEAV
QVREAQTARRKAQAAEDARLAAETRLAAEAAEQARRDQERARRVQQDVGARYCHRVYVGPMPYPYPVPMVTPPAPIPTPI
PTPMPRIVPGQQAGNSGGKPLPFVQAPVTRPAPIVPRPPHLHPPAYRIVCEPGYVYDGPEDLLPVE
>Mature_226_residues
MKPPIPSSRPRAPIALALGLWAAATALPAAGEVYRCTENGQTVYSDHPCGSRAVTVPLLDSTPSAADQKAARERAADEAV
QVREAQTARRKAQAAEDARLAAETRLAAEAAEQARRDQERARRVQQDVGARYCHRVYVGPMPYPYPVPMVTPPAPIPTPI
PTPMPRIVPGQQAGNSGGKPLPFVQAPVTRPAPIVPRPPHLHPPAYRIVCEPGYVYDGPEDLLPVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24301; Mature: 24301

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPPIPSSRPRAPIALALGLWAAATALPAAGEVYRCTENGQTVYSDHPCGSRAVTVPLLD
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCCEEEEEEEC
STPSAADQKAARERAADEAVQVREAQTARRKAQAAEDARLAAETRLAAEAAEQARRDQER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARRVQQDVGARYCHRVYVGPMPYPYPVPMVTPPAPIPTPIPTPMPRIVPGQQAGNSGGKP
HHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LPFVQAPVTRPAPIVPRPPHLHPPAYRIVCEPGYVYDGPEDLLPVE
CCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCHHHCCCCC
>Mature Secondary Structure
MKPPIPSSRPRAPIALALGLWAAATALPAAGEVYRCTENGQTVYSDHPCGSRAVTVPLLD
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCCEEEEEEEC
STPSAADQKAARERAADEAVQVREAQTARRKAQAAEDARLAAETRLAAEAAEQARRDQER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARRVQQDVGARYCHRVYVGPMPYPYPVPMVTPPAPIPTPIPTPMPRIVPGQQAGNSGGKP
HHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LPFVQAPVTRPAPIVPRPPHLHPPAYRIVCEPGYVYDGPEDLLPVE
CCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA