| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17544991
Identifier: 17544991
GI number: 17544991
Start: 304840
End: 305265
Strand: Reverse
Name: 17544991
Synonym: RSc0272
Alternate gene names: NA
Gene position: 305265-304840 (Counterclockwise)
Preceding gene: 17544992
Following gene: 17544990
Centisome position: 8.21
GC content: 68.31
Gene sequence:
>426_bases ATGCCGATGAAGAAAGGATTCCGCGCCCTCGTCGACGAAGCCATGGCAGAGATCCGCACGCTGTCGGTGGACGAAGCCCG CGCGATGCTCGACGACCCGCAAGTGCAGTTCGTCGACGTGCGCGACATCCGCGAGCTGGAGCGCGAGGGCGGGATCCCGC ACGCGCTGCACGCGCCGCGCGGCATGCTGGAGTTCTGGGTCGACCCGGACTCCCCGTATCACAAGCCGGCCTTTGCGCAG GACAAGACCTTCGTCTTCTTCTGCGCGGCCGGCTGGCGCAGCGCGCTGGCCGCCAAGACCGTGCAGGACATGGGCCTGGG ATCCGGCCACACCGGGCGCGTGGCGCATATCGACGGCGGCTTCACCGCCTGGAAGGCGGCCGGCGCGCCGGTCGCCGCTT ACGAAAAACCCACCAAGAAAGCATGA
Upstream 100 bases:
>100_bases CATCGACGGCGAGCCGTTCTGGGGCTTCGACCGCTTCGACCAGATCGAGGCCCTGCTGCGCGATGGCCGCGTGTAATACC CAACCGCCAAGGAGATCCGC
Downstream 100 bases:
>100_bases CTGAAGTCTCCCACCTCGCCCCCGCCGGCCGCCGCTTCGACGCCATCCTGTTCGATTGCGACGGCGTGCTGGTCGACAGC GAACCCCTCGTCAACCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Rhodanese-Like Protein; Rhodanese Domain-Containing Protein; Rhodanese-Related Sulfurtransferase; Rhodanese Domain Protein Sulfur Transferase; Sulfide Dehydrogenase; Rhodanese-Like Domain-Containing Protein; Rhodanese-Like Family Protein; Rhodanese-Like; Molybdopterin Biosynthesis Protein MoeB; Beta-Lactamase-Like; Rhodanese-Domain Protein; Rhodanese-Like Domain Protein; Rhodanese/Moeb/Thif Domain Protein; Bifunctional Glyoxylase/Rhodanese-Like Sulfurtransferase; Beta-Lactamase Domain Protein
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MPMKKGFRALVDEAMAEIRTLSVDEARAMLDDPQVQFVDVRDIRELEREGGIPHALHAPRGMLEFWVDPDSPYHKPAFAQ DKTFVFFCAAGWRSALAAKTVQDMGLGSGHTGRVAHIDGGFTAWKAAGAPVAAYEKPTKKA
Sequences:
>Translated_141_residues MPMKKGFRALVDEAMAEIRTLSVDEARAMLDDPQVQFVDVRDIRELEREGGIPHALHAPRGMLEFWVDPDSPYHKPAFAQ DKTFVFFCAAGWRSALAAKTVQDMGLGSGHTGRVAHIDGGFTAWKAAGAPVAAYEKPTKKA >Mature_140_residues PMKKGFRALVDEAMAEIRTLSVDEARAMLDDPQVQFVDVRDIRELEREGGIPHALHAPRGMLEFWVDPDSPYHKPAFAQD KTFVFFCAAGWRSALAAKTVQDMGLGSGHTGRVAHIDGGFTAWKAAGAPVAAYEKPTKKA
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15454; Mature: 15323
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMKKGFRALVDEAMAEIRTLSVDEARAMLDDPQVQFVDVRDIRELEREGGIPHALHAPR CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCCC GMLEFWVDPDSPYHKPAFAQDKTFVFFCAAGWRSALAAKTVQDMGLGSGHTGRVAHIDGG CCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCC FTAWKAAGAPVAAYEKPTKKA CCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PMKKGFRALVDEAMAEIRTLSVDEARAMLDDPQVQFVDVRDIRELEREGGIPHALHAPR CCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCCC GMLEFWVDPDSPYHKPAFAQDKTFVFFCAAGWRSALAAKTVQDMGLGSGHTGRVAHIDGG CCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCC FTAWKAAGAPVAAYEKPTKKA CCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA