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The map label for this gene is nahD [H]

Identifier: 17544992

GI number: 17544992

Start: 305290

End: 305895

Strand: Reverse

Name: nahD [H]

Synonym: RSc0273

Alternate gene names: 17544992

Gene position: 305895-305290 (Counterclockwise)

Preceding gene: 17544993

Following gene: 17544991

Centisome position: 8.23

GC content: 67.66

Gene sequence:

>606_bases
ATGAACGGGGCCATCGATTTCTACTTCGACTTTTCGTCGCCGTACGGCTACTTCGCCAGCACGCGCGTGGAGGCGCTTGC
CCAGCAGTACAACCGCGCGACGGCGTGGCACCCGATCCTGCTGGGGGTGGTGTTCAAGACCACCGGCGGCGCGCCCCTGG
CGCAGCAGCCGCTCAAGGGCGACTACGCCTGGCGCGATTTCGAGCGCACCGCGCGCTTCCACGGCATCGACTACCGCAAG
CCGACCCACTTCCCGCTGCCGACGCAATATGCGGCGCGCGCCATGCTGTGGGTGCACGACCACCATGGCGGCGACCGCGC
GATCGGGTTCGCGCAGGCCGTCTACCGCGCGCTGTTCGTCGACGACGTCAACATCGGCGAGCCGGCCGAGGTGATGAAGA
TCGCCGACGCGCTGGGCATCGACGGCAACGCGCTCAATGCTGGCGCGGGCAGCCAGCAGATCAAGGACCAGCTCAAGGCC
GAGATCGACCTGGCCATGTCGCGCGGGGTGTTCGGTTCGCCCTACGTGATCATCGACGGCGAGCCGTTCTGGGGCTTCGA
CCGCTTCGACCAGATCGAGGCCCTGCTGCGCGATGGCCGCGTGTAA

Upstream 100 bases:

>100_bases
ATCTACGAAGGCACCAGCGACATCCAGAAGATCTTGATCGCCCGCGCGCTCGCGTAGCGGTTTTTTTGGGAAAACGGCAA
CAACCAAGGGGGAGTGCATC

Downstream 100 bases:

>100_bases
TACCCAACCGCCAAGGAGATCCGCATGCCGATGAAGAAAGGATTCCGCGCCCTCGTCGACGAAGCCATGGCAGAGATCCG
CACGCTGTCGGTGGACGAAG

Product: 2-hydroxychromene-2-carboxylate isomerase

Products: NA

Alternate protein names: HCCA isomerase [H]

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MNGAIDFYFDFSSPYGYFASTRVEALAQQYNRATAWHPILLGVVFKTTGGAPLAQQPLKGDYAWRDFERTARFHGIDYRK
PTHFPLPTQYAARAMLWVHDHHGGDRAIGFAQAVYRALFVDDVNIGEPAEVMKIADALGIDGNALNAGAGSQQIKDQLKA
EIDLAMSRGVFGSPYVIIDGEPFWGFDRFDQIEALLRDGRV

Sequences:

>Translated_201_residues
MNGAIDFYFDFSSPYGYFASTRVEALAQQYNRATAWHPILLGVVFKTTGGAPLAQQPLKGDYAWRDFERTARFHGIDYRK
PTHFPLPTQYAARAMLWVHDHHGGDRAIGFAQAVYRALFVDDVNIGEPAEVMKIADALGIDGNALNAGAGSQQIKDQLKA
EIDLAMSRGVFGSPYVIIDGEPFWGFDRFDQIEALLRDGRV
>Mature_201_residues
MNGAIDFYFDFSSPYGYFASTRVEALAQQYNRATAWHPILLGVVFKTTGGAPLAQQPLKGDYAWRDFERTARFHGIDYRK
PTHFPLPTQYAARAMLWVHDHHGGDRAIGFAQAVYRALFVDDVNIGEPAEVMKIADALGIDGNALNAGAGSQQIKDQLKA
EIDLAMSRGVFGSPYVIIDGEPFWGFDRFDQIEALLRDGRV

Specific function: Catalyzes the isomerization of 2-hydroxychromene-2- carboxylate (HCCA) to trans-O-hydroxybenzylidenepyruvate (THBPA). The reaction is reversible [H]

COG id: COG3917

COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR014440
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 22374; Mature: 22374

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGAIDFYFDFSSPYGYFASTRVEALAQQYNRATAWHPILLGVVFKTTGGAPLAQQPLKG
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
DYAWRDFERTARFHGIDYRKPTHFPLPTQYAARAMLWVHDHHGGDRAIGFAQAVYRALFV
CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHH
DDVNIGEPAEVMKIADALGIDGNALNAGAGSQQIKDQLKAEIDLAMSRGVFGSPYVIIDG
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
EPFWGFDRFDQIEALLRDGRV
CCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MNGAIDFYFDFSSPYGYFASTRVEALAQQYNRATAWHPILLGVVFKTTGGAPLAQQPLKG
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
DYAWRDFERTARFHGIDYRKPTHFPLPTQYAARAMLWVHDHHGGDRAIGFAQAVYRALFV
CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHH
DDVNIGEPAEVMKIADALGIDGNALNAGAGSQQIKDQLKAEIDLAMSRGVFGSPYVIIDG
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
EPFWGFDRFDQIEALLRDGRV
CCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002605; 1447127 [H]