| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is yieH [H]
Identifier: 17544990
GI number: 17544990
Start: 304154
End: 304843
Strand: Reverse
Name: yieH [H]
Synonym: RSc0271
Alternate gene names: 17544990
Gene position: 304843-304154 (Counterclockwise)
Preceding gene: 17544991
Following gene: 17544989
Centisome position: 8.2
GC content: 71.16
Gene sequence:
>690_bases ATGACTGAAGTCTCCCACCTCGCCCCCGCCGGCCGCCGCTTCGACGCCATCCTGTTCGATTGCGACGGCGTGCTGGTCGA CAGCGAACCCCTCGTCAACCGGCTGATCTGGCAGATGCTCAATGAGCTCGGCATCGACATCAGCCTGGAGGACTCCACCC GGCGCTTCCTCGGCAAGGCCATCCGCGAAGAGCTGGATGCGATTGCCGCGATGCGCGGCGCGCCGCTGCCGGCCGGCTGG CTGTCCACCTTCCACGCGCGCCGCAATGCGCTGCTGGAAGCCGAAGTGCAGGCCGTGCCCCACGTGACGCAGGCCATCGA AGCGCTGTCCGCGCTGGGCCTGCCGATGGCGGTCGCCTCCGGCGCCGACCGCCTGAAGGTCGAGCTGCAGCTCAACCGCA CCGGCCTGATCCACCGCTTCCAACCTACCGATGCGCGCATCTTTTCCGCCACCGAAGTCGAGCGCAGCAAACCCGCGCCC GACGTCTACCTGCTGGCCGCGCGCCGGCTGGGGGTGGCGCCGTCGCGCTGCGTGGTGATCGAGGACAGCCCCACCGGCGT CACCGCCGGCCACACCGCCGGCATGACGGTGCTGGCCTACGCCGGCCGCAACGCGCCCGGCCCGCTGATCGCCGCCGGCG CCGCGCACACCTTCACCGACATGCGCCACCTGCCGGCGCTGCTGGCATGA
Upstream 100 bases:
>100_bases CCGGCCACACCGGGCGCGTGGCGCATATCGACGGCGGCTTCACCGCCTGGAAGGCGGCCGGCGCGCCGGTCGCCGCTTAC GAAAAACCCACCAAGAAAGC
Downstream 100 bases:
>100_bases CGCGCGCCCTGCCCGCCCCGGCCCCGACCGCGGCCTGCCCGTGCGGCGCCGGCGCCTACGGCCGCTGCTGCGGCCCGTTC CATGCGGGCGACGCGGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTEVSHLAPAGRRFDAILFDCDGVLVDSEPLVNRLIWQMLNELGIDISLEDSTRRFLGKAIREELDAIAAMRGAPLPAGW LSTFHARRNALLEAEVQAVPHVTQAIEALSALGLPMAVASGADRLKVELQLNRTGLIHRFQPTDARIFSATEVERSKPAP DVYLLAARRLGVAPSRCVVIEDSPTGVTAGHTAGMTVLAYAGRNAPGPLIAAGAAHTFTDMRHLPALLA
Sequences:
>Translated_229_residues MTEVSHLAPAGRRFDAILFDCDGVLVDSEPLVNRLIWQMLNELGIDISLEDSTRRFLGKAIREELDAIAAMRGAPLPAGW LSTFHARRNALLEAEVQAVPHVTQAIEALSALGLPMAVASGADRLKVELQLNRTGLIHRFQPTDARIFSATEVERSKPAP DVYLLAARRLGVAPSRCVVIEDSPTGVTAGHTAGMTVLAYAGRNAPGPLIAAGAAHTFTDMRHLPALLA >Mature_228_residues TEVSHLAPAGRRFDAILFDCDGVLVDSEPLVNRLIWQMLNELGIDISLEDSTRRFLGKAIREELDAIAAMRGAPLPAGWL STFHARRNALLEAEVQAVPHVTQAIEALSALGLPMAVASGADRLKVELQLNRTGLIHRFQPTDARIFSATEVERSKPAPD VYLLAARRLGVAPSRCVVIEDSPTGVTAGHTAGMTVLAYAGRNAPGPLIAAGAAHTFTDMRHLPALLA
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=216, Percent_Identity=30.0925925925926, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1789046, Length=193, Percent_Identity=31.6062176165803, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1788021, Length=215, Percent_Identity=32.5581395348837, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082080, Length=196, Percent_Identity=33.1632653061224, Blast_Score=60, Evalue=1e-10, Organism=Drosophila melanogaster, GI45550911, Length=221, Percent_Identity=30.316742081448, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI17137324, Length=195, Percent_Identity=31.7948717948718, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI116008157, Length=196, Percent_Identity=31.1224489795918, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI20129151, Length=187, Percent_Identity=28.8770053475936, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24540; Mature: 24408
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVSHLAPAGRRFDAILFDCDGVLVDSEPLVNRLIWQMLNELGIDISLEDSTRRFLGKA CCCCCCCCCCCCCEEEEEEECCCEEECCHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHH IREELDAIAAMRGAPLPAGWLSTFHARRNALLEAEVQAVPHVTQAIEALSALGLPMAVAS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC GADRLKVELQLNRTGLIHRFQPTDARIFSATEVERSKPAPDVYLLAARRLGVAPSRCVVI CCCEEEEEEEECCCCCEEEECCCCCEEEEHHHHHCCCCCCCEEEEEHHHCCCCCCEEEEE EDSPTGVTAGHTAGMTVLAYAGRNAPGPLIAAGAAHTFTDMRHLPALLA ECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure TEVSHLAPAGRRFDAILFDCDGVLVDSEPLVNRLIWQMLNELGIDISLEDSTRRFLGKA CCCCCCCCCCCCEEEEEEECCCEEECCHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHH IREELDAIAAMRGAPLPAGWLSTFHARRNALLEAEVQAVPHVTQAIEALSALGLPMAVAS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC GADRLKVELQLNRTGLIHRFQPTDARIFSATEVERSKPAPDVYLLAARRLGVAPSRCVVI CCCEEEEEEEECCCCCEEEECCCCCEEEEHHHHHCCCCCCCEEEEEHHHCCCCCCEEEEE EDSPTGVTAGHTAGMTVLAYAGRNAPGPLIAAGAAHTFTDMRHLPALLA ECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]