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The map label for this gene is ychJ [C]

Identifier: 17544989

GI number: 17544989

Start: 303723

End: 304157

Strand: Reverse

Name: ychJ [C]

Synonym: RSc0270

Alternate gene names: 17544989

Gene position: 304157-303723 (Counterclockwise)

Preceding gene: 17544990

Following gene: 17544988

Centisome position: 8.18

GC content: 74.94

Gene sequence:

>435_bases
ATGACGCGCGCCCTGCCCGCCCCGGCCCCGACCGCGGCCTGCCCGTGCGGCGCCGGCGCCTACGGCCGCTGCTGCGGCCC
GTTCCATGCGGGCGACGCGGTGCCGGCCACGGCCGAGCAGCTCATGCGCTCGCGCTACAGCGCCTATGTGCTGCACGACA
CGGCCTACCTGCGCCGCACCTGGCACCCGTCCACCTGCCCGACAGACCTGGAGCGCGGCGAAGCCGATGCGCCCGCCACG
CGCTGGCTCGGCCTGGACGTCAAGCGCCACACGCAGCAGGACCCGACCCACGCGACGGTGGAGTTCGTCGCGCGCTACAA
GGTGGGCGGACGCGCGCACCGCCTGCACGAAACCAGCCGCTTCGTCCGCCTGGACGCGGGCGGCGCCGAATCCCCGCAAG
GCCGCTGGCTGTACGTTGACGGCGACCTGACCTGA

Upstream 100 bases:

>100_bases
CGGTGCTGGCCTACGCCGGCCGCAACGCGCCCGGCCCGCTGATCGCCGCCGGCGCCGCGCACACCTTCACCGACATGCGC
CACCTGCCGGCGCTGCTGGC

Downstream 100 bases:

>100_bases
CCCCGACCCGACCGCCGCCATGCCGACACTCGAGACCAAGCTCAACCCACGTGCCGACGACTTCAAGGCCAACGCCGACG
CCATGCGTGCGCTGGTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTRALPAPAPTAACPCGAGAYGRCCGPFHAGDAVPATAEQLMRSRYSAYVLHDTAYLRRTWHPSTCPTDLERGEADAPAT
RWLGLDVKRHTQQDPTHATVEFVARYKVGGRAHRLHETSRFVRLDAGGAESPQGRWLYVDGDLT

Sequences:

>Translated_144_residues
MTRALPAPAPTAACPCGAGAYGRCCGPFHAGDAVPATAEQLMRSRYSAYVLHDTAYLRRTWHPSTCPTDLERGEADAPAT
RWLGLDVKRHTQQDPTHATVEFVARYKVGGRAHRLHETSRFVRLDAGGAESPQGRWLYVDGDLT
>Mature_143_residues
TRALPAPAPTAACPCGAGAYGRCCGPFHAGDAVPATAEQLMRSRYSAYVLHDTAYLRRTWHPSTCPTDLERGEADAPATR
WLGLDVKRHTQQDPTHATVEFVARYKVGGRAHRLHETSRFVRLDAGGAESPQGRWLYVDGDLT

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family

Homologues:

Organism=Escherichia coli, GI1787484, Length=132, Percent_Identity=42.4242424242424, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y270_RALSO (Q8Y2R5)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_518391.1
- ProteinModelPortal:   Q8Y2R5
- SMR:   Q8Y2R5
- GeneID:   1219073
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc0270
- NMPDR:   fig|267608.1.peg.270
- HOGENOM:   HBG609508
- OMA:   FTARWHD
- ProtClustDB:   PRK01842
- BioCyc:   RSOL267608:RSC0270-MONOMER
- HAMAP:   MF_00612
- InterPro:   IPR023006

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15748; Mature: 15617

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS00022 EGF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRALPAPAPTAACPCGAGAYGRCCGPFHAGDAVPATAEQLMRSRYSAYVLHDTAYLRRT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECHHHHHHC
WHPSTCPTDLERGEADAPATRWLGLDVKRHTQQDPTHATVEFVARYKVGGRAHRLHETSR
CCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCE
FVRLDAGGAESPQGRWLYVDGDLT
EEEEECCCCCCCCCCEEEECCCCC
>Mature Secondary Structure 
TRALPAPAPTAACPCGAGAYGRCCGPFHAGDAVPATAEQLMRSRYSAYVLHDTAYLRRT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECHHHHHHC
WHPSTCPTDLERGEADAPATRWLGLDVKRHTQQDPTHATVEFVARYKVGGRAHRLHETSR
CCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCE
FVRLDAGGAESPQGRWLYVDGDLT
EEEEECCCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852