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The map label for this gene is ycgL [H]

Identifier: 17544944

GI number: 17544944

Start: 247459

End: 248304

Strand: Direct

Name: ycgL [H]

Synonym: RSc0225

Alternate gene names: 17544944

Gene position: 247459-248304 (Clockwise)

Preceding gene: 17544943

Following gene: 17544945

Centisome position: 6.66

GC content: 67.38

Gene sequence:

>846_bases
ATGCCGCACGCCGATCACCCGAACGTTTCGAACGCAATGTCTTTTCTCTACGCCCATCCGGTTTCCGCCGGCATCCGCGC
ACGGGTCCTGTCCGAACTCGCCGACATCGAGCGGCGGCACGATGTCCGGGTCCTGTTTGCCTGCGAGTCCGGCAGCCGGG
GCTGGGGGTTTGCCTCGCCCGACAGCGACTACGACGTGCGCTTCGTCTACGTGCATCGCCCGGCCTGGTACCTGAGCGTC
GAGCCGCAGCGCGACGTGATCGAGGTGCCGATCAGCGATGAACTGGATGTGGGCGGCTGGGAGCTGCGCAAGGCGCTGCA
ACTGATGCACCGCTCCAATCCGACGCTGCTGGAGTGGCTGGCCTCGCCGATCGTCTACCGGGAAGACCCGGCGGCGGTAC
AGCGCATGCGCGCGCTGGCCCCGACCTTCTTCTCGGAGCGCAGGGGGCGCTGGCACTACCTGTCGATGGCGGCCAAGACC
TTTCGCGACCACCTGCAGGGCGAGACGATTCGCTTGAAGAAGTACTTCTACGTCCTGCGCCCGCTGCTGGCGGCCCAGTG
GATCGACGCCGGGCGCGGCATGCCGCCCATGCGCTTCGCCGATCTGGCGGACGTCATGGTGGCGGACGCGCCGCTGCGCG
AGGAAATCAATCGGCTGCTGGCCATCAAGATGGCCTCTTCCGAGGCGGAATACGGTGCCCGGTTTCCGCGCATCCACGCC
TTTGTCGAGCAGGCATTGGCCGCGCAGGCGCTGCCGGCGGACTTCCGGCAAGGCGGCGGAGACCCCGCGGCGCTGGATGC
GTTCCTCTATGCAACCGTGATGGCGGCGGACACCCATCCTTCCTGA

Upstream 100 bases:

>100_bases
GTGAAGGGGTAGCCTGCCGGGGGTAGGCCACCGTCGAAGCGAAGGCGCCGCGCGCTGTCCGGCGTGCCCGGGACCCGCCA
TCCGGCCGGGCTCGGGCACA

Downstream 100 bases:

>100_bases
TGCGCCCGGCATGGGCGCGCAACGAACAACAATAAACAAGTCATGAACAACCGACTACAACCCGCGCCCTGCATCGAGCT
CGATGGTGCCCAAGGCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MPHADHPNVSNAMSFLYAHPVSAGIRARVLSELADIERRHDVRVLFACESGSRGWGFASPDSDYDVRFVYVHRPAWYLSV
EPQRDVIEVPISDELDVGGWELRKALQLMHRSNPTLLEWLASPIVYREDPAAVQRMRALAPTFFSERRGRWHYLSMAAKT
FRDHLQGETIRLKKYFYVLRPLLAAQWIDAGRGMPPMRFADLADVMVADAPLREEINRLLAIKMASSEAEYGARFPRIHA
FVEQALAAQALPADFRQGGGDPAALDAFLYATVMAADTHPS

Sequences:

>Translated_281_residues
MPHADHPNVSNAMSFLYAHPVSAGIRARVLSELADIERRHDVRVLFACESGSRGWGFASPDSDYDVRFVYVHRPAWYLSV
EPQRDVIEVPISDELDVGGWELRKALQLMHRSNPTLLEWLASPIVYREDPAAVQRMRALAPTFFSERRGRWHYLSMAAKT
FRDHLQGETIRLKKYFYVLRPLLAAQWIDAGRGMPPMRFADLADVMVADAPLREEINRLLAIKMASSEAEYGARFPRIHA
FVEQALAAQALPADFRQGGGDPAALDAFLYATVMAADTHPS
>Mature_280_residues
PHADHPNVSNAMSFLYAHPVSAGIRARVLSELADIERRHDVRVLFACESGSRGWGFASPDSDYDVRFVYVHRPAWYLSVE
PQRDVIEVPISDELDVGGWELRKALQLMHRSNPTLLEWLASPIVYREDPAAVQRMRALAPTFFSERRGRWHYLSMAAKTF
RDHLQGETIRLKKYFYVLRPLLAAQWIDAGRGMPPMRFADLADVMVADAPLREEINRLLAIKMASSEAEYGARFPRIHAF
VEQALAAQALPADFRQGGGDPAALDAFLYATVMAADTHPS

Specific function: Unknown

COG id: COG3541

COG function: function code R; Predicted nucleotidyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018775 [H]

Pfam domain/function: PF10127 Nuc-transf [H]

EC number: NA

Molecular weight: Translated: 31704; Mature: 31572

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHADHPNVSNAMSFLYAHPVSAGIRARVLSELADIERRHDVRVLFACESGSRGWGFASP
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCC
DSDYDVRFVYVHRPAWYLSVEPQRDVIEVPISDELDVGGWELRKALQLMHRSNPTLLEWL
CCCCCEEEEEEECCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH
ASPIVYREDPAAVQRMRALAPTFFSERRGRWHYLSMAAKTFRDHLQGETIRLKKYFYVLR
HCCCEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHH
PLLAAQWIDAGRGMPPMRFADLADVMVADAPLREEINRLLAIKMASSEAEYGARFPRIHA
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHCCCCHHHHH
FVEQALAAQALPADFRQGGGDPAALDAFLYATVMAADTHPS
HHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PHADHPNVSNAMSFLYAHPVSAGIRARVLSELADIERRHDVRVLFACESGSRGWGFASP
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCC
DSDYDVRFVYVHRPAWYLSVEPQRDVIEVPISDELDVGGWELRKALQLMHRSNPTLLEWL
CCCCCEEEEEEECCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH
ASPIVYREDPAAVQRMRALAPTFFSERRGRWHYLSMAAKTFRDHLQGETIRLKKYFYVLR
HCCCEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHH
PLLAAQWIDAGRGMPPMRFADLADVMVADAPLREEINRLLAIKMASSEAEYGARFPRIHA
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHCCCCHHHHH
FVEQALAAQALPADFRQGGGDPAALDAFLYATVMAADTHPS
HHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]