| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is leuE [H]
Identifier: 17544792
GI number: 17544792
Start: 83613
End: 84260
Strand: Direct
Name: leuE [H]
Synonym: RSc0073
Alternate gene names: 17544792
Gene position: 83613-84260 (Clockwise)
Preceding gene: 17544791
Following gene: 17544793
Centisome position: 2.25
GC content: 69.14
Gene sequence:
>648_bases ATGAGTACGCTGGGCATCATCAACCTGCCGGTCTTCATGCTTGCCGTGCTCCTGCTCAACGTGACGCCCGGGCCGGATAC CGCCTATATCGTCGGGCGCAGCGTGTCGCAGGGGCGCGCGGCGGGGCTGATGTCGAGCCTGGGTGTGTCGGCGGGGTGCT GCGTGCACGTGCTGGCGGTGGCCTTCGGGCTGACGGCGCTGCTGGCCGCGTCGGCCGTGGCGTTCACGGTGATCAAGGCG ATCGGCGCGGCGTATCTGATCTATCTGGGCGGCCGCATGCTGCTGGCGCCGGCCGGGAGCGACGACGCGCCCGTGGCGCA AGCGGTCGCTACTGCCCGCCGTCCGCTGCGCGCGCTGTTCATGCAGGGGTTCCTGACCAATGTGCTGAACCCGAAGGTGG TGCTGTTCTTCCTGTCGTTCTTCCCGCAATTCGTCGATCCGGGCGCGAGCCACAAGGCGGCGGCGTTTCTGGTGCTGGGG GCGGTGTTCATCGTGATGTCGACGGCATGGAACAGCCTGGTCGCCTGGGTGGCGGCCAGCGTCACGCGCCGGGTGGCGGG CAAGCCGGGTATCAAGCGCTGGCTCGACCGCGTTGTCGGGACGGCGTTCATCGGGCTGGGGGCGCGGCTGGCGTTCACGA CCCGATGA
Upstream 100 bases:
>100_bases CCCGCGCGCGAGTTCCTGCAGGGTTTGCCGATCCGGCCGGGGCAGCGCTTCGCTTCGCGCGCCTGAATTTCCCGCTGTCT TTCCTGGAAGGATTGCCGCC
Downstream 100 bases:
>100_bases CGCGCGGTTGCGGCGGCCATGGCCGGATGCGGCGAAATACCGCGCAACCCCTTGAATTTTCAGCGCTTAGCGCGATCTAA GAGACTCGAACGTACGGACC
Product: transporter transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MSTLGIINLPVFMLAVLLLNVTPGPDTAYIVGRSVSQGRAAGLMSSLGVSAGCCVHVLAVAFGLTALLAASAVAFTVIKA IGAAYLIYLGGRMLLAPAGSDDAPVAQAVATARRPLRALFMQGFLTNVLNPKVVLFFLSFFPQFVDPGASHKAAAFLVLG AVFIVMSTAWNSLVAWVAASVTRRVAGKPGIKRWLDRVVGTAFIGLGARLAFTTR
Sequences:
>Translated_215_residues MSTLGIINLPVFMLAVLLLNVTPGPDTAYIVGRSVSQGRAAGLMSSLGVSAGCCVHVLAVAFGLTALLAASAVAFTVIKA IGAAYLIYLGGRMLLAPAGSDDAPVAQAVATARRPLRALFMQGFLTNVLNPKVVLFFLSFFPQFVDPGASHKAAAFLVLG AVFIVMSTAWNSLVAWVAASVTRRVAGKPGIKRWLDRVVGTAFIGLGARLAFTTR >Mature_214_residues STLGIINLPVFMLAVLLLNVTPGPDTAYIVGRSVSQGRAAGLMSSLGVSAGCCVHVLAVAFGLTALLAASAVAFTVIKAI GAAYLIYLGGRMLLAPAGSDDAPVAQAVATARRPLRALFMQGFLTNVLNPKVVLFFLSFFPQFVDPGASHKAAAFLVLGA VFIVMSTAWNSLVAWVAASVTRRVAGKPGIKRWLDRVVGTAFIGLGARLAFTTR
Specific function: Exporter of leucine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788099, Length=208, Percent_Identity=28.8461538461538, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI48994979, Length=203, Percent_Identity=30.5418719211823, Blast_Score=85, Evalue=3e-18, Organism=Escherichia coli, GI48994978, Length=196, Percent_Identity=30.6122448979592, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786522, Length=209, Percent_Identity=27.7511961722488, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 22349; Mature: 22218
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLGIINLPVFMLAVLLLNVTPGPDTAYIVGRSVSQGRAAGLMSSLGVSAGCCVHVLAV CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHH AFGLTALLAASAVAFTVIKAIGAAYLIYLGGRMLLAPAGSDDAPVAQAVATARRPLRALF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH MQGFLTNVLNPKVVLFFLSFFPQFVDPGASHKAAAFLVLGAVFIVMSTAWNSLVAWVAAS HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTRRVAGKPGIKRWLDRVVGTAFIGLGARLAFTTR HHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure STLGIINLPVFMLAVLLLNVTPGPDTAYIVGRSVSQGRAAGLMSSLGVSAGCCVHVLAV CCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHH AFGLTALLAASAVAFTVIKAIGAAYLIYLGGRMLLAPAGSDDAPVAQAVATARRPLRALF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH MQGFLTNVLNPKVVLFFLSFFPQFVDPGASHKAAAFLVLGAVFIVMSTAWNSLVAWVAAS HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTRRVAGKPGIKRWLDRVVGTAFIGLGARLAFTTR HHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA