Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17232575

Identifier: 17232575

GI number: 17232575

Start: 6054612

End: 6054839

Strand: Reverse

Name: 17232575

Synonym: asl5083

Alternate gene names: NA

Gene position: 6054839-6054612 (Counterclockwise)

Preceding gene: 17232577

Following gene: 17232574

Centisome position: 94.4

GC content: 42.98

Gene sequence:

>228_bases
GTGGGCGATCGCTTCCCAGGCTTTTTCTGTAAATTGGTTGGGATTAGTTGGTTGCATAGGCTGATTGAGGGACGACCAAA
TTTAAATGCTCAAATGCAGATAGAACAATTTGTTCTCATATCGTCATTTTACGGAGAGTTGCACCATCACCGGGATCGGT
CTTCACGTCTTACTAGAGTAGTATTACTTCCCTATTTACTCATCCCTCTTGCAGCAGTAAGCAACTAA

Upstream 100 bases:

>100_bases
TCAAAATCCCACTGGCCAAACCATCTTGTTCCAGTAGCGCCTTCATCAGGTGTTCGCTTTCTATCTGCTGCTGTTGATGC
TGTTTAGCAATCTCAGGAGT

Downstream 100 bases:

>100_bases
ATGGAGTTAATTGACTAAAAATTCCTCTAAATAAGTAGATAGGCGCATAACACGAAAAACATCTCTGGCGTAACTTCTAG
ACAGTCTGATAAATCAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MGDRFPGFFCKLVGISWLHRLIEGRPNLNAQMQIEQFVLISSFYGELHHHRDRSSRLTRVVLLPYLLIPLAAVSN

Sequences:

>Translated_75_residues
MGDRFPGFFCKLVGISWLHRLIEGRPNLNAQMQIEQFVLISSFYGELHHHRDRSSRLTRVVLLPYLLIPLAAVSN
>Mature_74_residues
GDRFPGFFCKLVGISWLHRLIEGRPNLNAQMQIEQFVLISSFYGELHHHRDRSSRLTRVVLLPYLLIPLAAVSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8676; Mature: 8545

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDRFPGFFCKLVGISWLHRLIEGRPNLNAQMQIEQFVLISSFYGELHHHRDRSSRLTRV
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VLLPYLLIPLAAVSN
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
GDRFPGFFCKLVGISWLHRLIEGRPNLNAQMQIEQFVLISSFYGELHHHRDRSSRLTRV
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VLLPYLLIPLAAVSN
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA