Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

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The map label for this gene is 17232498

Identifier: 17232498

GI number: 17232498

Start: 5977644

End: 5978063

Strand: Reverse

Name: 17232498

Synonym: all5006

Alternate gene names: NA

Gene position: 5978063-5977644 (Counterclockwise)

Preceding gene: 17232500

Following gene: 17232495

Centisome position: 93.21

GC content: 35.95

Gene sequence:

>420_bases
GTGTATATCCACTTAATGATGATGGAACAAAACTCAGAGAACACTTTAAAAGTCGCTCATCAAGGATTTGAATTTTTTAC
TCAAGGTCTAGCAACGGGAGAATGGCAAAAATTTCTCGATATGCTAACCGAAGATTTTACCTTTTGGTTTCCAATGGGGA
AATTTCATGGCTTGAATGTAGGGAAAGAAAGAGCCAAAGAATTTTTTACGTATGTTTCTGAGTCTTTTCATCCTGGAATA
CAACTATCATCCCTAGACCATGTCACCAGTAATGAAACAACAGTAGTCTTTGAGTTTCGGGATGAAGGGCTATTATTAGG
AAAACCTTATAAAAATCGCGTAGCAGTTTCTTTTGATGTACGTGGCGACAAAATTTGTAGCTATCGAGAATATTTTGGTA
GTGATGGTAAATCTAATTAA

Upstream 100 bases:

>100_bases
ATTTTCAAGTTTCTTCTGTCTTAAGAATGATTACTTTTAGTGCAGATATCACCAAATTATTAATAATCTGGGGAAAGAGA
CATCAATAGATAATTATTTA

Downstream 100 bases:

>100_bases
AGTTTGGTAATTGGTCATTGAAAATTAATTTATTACCCATTACCCATCCTTAATTTAATTATTTTGAGCTTGGATTGCTT
GCAATTCCTGACATTTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MYIHLMMMEQNSENTLKVAHQGFEFFTQGLATGEWQKFLDMLTEDFTFWFPMGKFHGLNVGKERAKEFFTYVSESFHPGI
QLSSLDHVTSNETTVVFEFRDEGLLLGKPYKNRVAVSFDVRGDKICSYREYFGSDGKSN

Sequences:

>Translated_139_residues
MYIHLMMMEQNSENTLKVAHQGFEFFTQGLATGEWQKFLDMLTEDFTFWFPMGKFHGLNVGKERAKEFFTYVSESFHPGI
QLSSLDHVTSNETTVVFEFRDEGLLLGKPYKNRVAVSFDVRGDKICSYREYFGSDGKSN
>Mature_139_residues
MYIHLMMMEQNSENTLKVAHQGFEFFTQGLATGEWQKFLDMLTEDFTFWFPMGKFHGLNVGKERAKEFFTYVSESFHPGI
QLSSLDHVTSNETTVVFEFRDEGLLLGKPYKNRVAVSFDVRGDKICSYREYFGSDGKSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16122; Mature: 16122

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIHLMMMEQNSENTLKVAHQGFEFFTQGLATGEWQKFLDMLTEDFTFWFPMGKFHGLNV
CEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCC
GKERAKEFFTYVSESFHPGIQLSSLDHVTSNETTVVFEFRDEGLLLGKPYKNRVAVSFDV
CHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCCEEEEEEC
RGDKICSYREYFGSDGKSN
CCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYIHLMMMEQNSENTLKVAHQGFEFFTQGLATGEWQKFLDMLTEDFTFWFPMGKFHGLNV
CEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCC
GKERAKEFFTYVSESFHPGIQLSSLDHVTSNETTVVFEFRDEGLLLGKPYKNRVAVSFDV
CHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCCEEEEEEC
RGDKICSYREYFGSDGKSN
CCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA