| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231959
Identifier: 17231959
GI number: 17231959
Start: 5353094
End: 5354017
Strand: Reverse
Name: 17231959
Synonym: all4467
Alternate gene names: NA
Gene position: 5354017-5353094 (Counterclockwise)
Preceding gene: 17231964
Following gene: 17231957
Centisome position: 83.48
GC content: 33.23
Gene sequence:
>924_bases ATGGTTGATAATTTATCTAAAGATACCCATCATATAGAAGACAAACAAGAGACTAGTAATTCTATTGAATTAGAACTTTA TCAATTCCTAAATAAACTGAAAACCGGAGTTTGGCTACTAGGGATTCCATCTTGGCTATTTGGACTAACAGATAGAAGTA TGTCTGCCTTTGCCGATGGTTGTCTATCTACAAGAGAGATTTTTCAGCTTTTGACAACATCATTTTTCTTCATAAGTTGG TTGTATTTAAAGCCAGAAAATGGCTCCGGTGAAGAGGTAGGCTTATTATGTCAAAATCAAGCAAGTCGATTTGAACTGAA AAAACGACACATGATTAGCCAGGAGTATATTCTCCCCTTTCCTTACCTTTGCCAAATTTATCATCTCTTAAATCTTAAAC ATTTAGAAACTATTCACAAATTCAGTTTAAATAATTTAAGAGTGCTAAGTATCAGTGACTTTCAACAAACAAAATTTGGG GGAATCATCAAATTCAACACACTCTTAGATTCGCCCATCAATGCTTTGAGGATTTGGAGACAACCGATAGTAGAAGTAGA TTTAATTTTACATACTCCTTATACAATTGAACTGAGCATCCCAGTTTACGATAACAAAAGAATAACGGTAATATTTTATG CTTTTCCTCTCAACGAGCGAGAACACCAGTTATTTATAGAAATCTATAGTGACCTAGATTGGCCAAAACCATTGTTACAA ATATTATTACATTTTGCATCTTGTTTAACTCTCTTTGAAGACTTACCTTATCTACGTAATTTGGCTGAAGTCAATATAGA ACGTTTATTCAAATTAAGCAGATTTTCTAAACAAGCAAATATGCTGCTGTTTAAAAGATTTGTGGAATTATATGGCTCAA GTGGAGACAGAATTAAATTGCTGGAGGGAAGTAATGGAAATTAG
Upstream 100 bases:
>100_bases TAAGAGTATTGGGACATCTATATTCCAGCCAAGGATAGAGTATTAATTTATTATTTCTAATTAACGTGAAGATAGTAGCT AATGGTTAACTTTAATCAGC
Downstream 100 bases:
>100_bases AAACGATTGGAGCATAATGAACTAATAACTATTGATTGCGATGGGCTGCGCCCCTCAGTAGGCGATCGCTACTTCCTTGA GAATGGCCATTGGGCCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MVDNLSKDTHHIEDKQETSNSIELELYQFLNKLKTGVWLLGIPSWLFGLTDRSMSAFADGCLSTREIFQLLTTSFFFISW LYLKPENGSGEEVGLLCQNQASRFELKKRHMISQEYILPFPYLCQIYHLLNLKHLETIHKFSLNNLRVLSISDFQQTKFG GIIKFNTLLDSPINALRIWRQPIVEVDLILHTPYTIELSIPVYDNKRITVIFYAFPLNEREHQLFIEIYSDLDWPKPLLQ ILLHFASCLTLFEDLPYLRNLAEVNIERLFKLSRFSKQANMLLFKRFVELYGSSGDRIKLLEGSNGN
Sequences:
>Translated_307_residues MVDNLSKDTHHIEDKQETSNSIELELYQFLNKLKTGVWLLGIPSWLFGLTDRSMSAFADGCLSTREIFQLLTTSFFFISW LYLKPENGSGEEVGLLCQNQASRFELKKRHMISQEYILPFPYLCQIYHLLNLKHLETIHKFSLNNLRVLSISDFQQTKFG GIIKFNTLLDSPINALRIWRQPIVEVDLILHTPYTIELSIPVYDNKRITVIFYAFPLNEREHQLFIEIYSDLDWPKPLLQ ILLHFASCLTLFEDLPYLRNLAEVNIERLFKLSRFSKQANMLLFKRFVELYGSSGDRIKLLEGSNGN >Mature_307_residues MVDNLSKDTHHIEDKQETSNSIELELYQFLNKLKTGVWLLGIPSWLFGLTDRSMSAFADGCLSTREIFQLLTTSFFFISW LYLKPENGSGEEVGLLCQNQASRFELKKRHMISQEYILPFPYLCQIYHLLNLKHLETIHKFSLNNLRVLSISDFQQTKFG GIIKFNTLLDSPINALRIWRQPIVEVDLILHTPYTIELSIPVYDNKRITVIFYAFPLNEREHQLFIEIYSDLDWPKPLLQ ILLHFASCLTLFEDLPYLRNLAEVNIERLFKLSRFSKQANMLLFKRFVELYGSSGDRIKLLEGSNGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35905; Mature: 35905
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDNLSKDTHHIEDKQETSNSIELELYQFLNKLKTGVWLLGIPSWLFGLTDRSMSAFADG CCCCCCCCHHHCCCHHHCCCCHHHHHHHHHHHHCCCEEEEECHHHHHHCCCCHHHHHHHH CLSTREIFQLLTTSFFFISWLYLKPENGSGEEVGLLCQNQASRFELKKRHMISQEYILPF CCCHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCC PYLCQIYHLLNLKHLETIHKFSLNNLRVLSISDFQQTKFGGIIKFNTLLDSPINALRIWR HHHHHHHHHHCHHHHHHHHHHCCCCEEEEEECCCCHHHCCCEEEEHHHHCCCHHHHHHHH QPIVEVDLILHTPYTIELSIPVYDNKRITVIFYAFPLNEREHQLFIEIYSDLDWPKPLLQ CCHHEEEEEEECCEEEEEEEEEECCCEEEEEEEEECCCCCCHHHHEEHHHCCCCCHHHHH ILLHFASCLTLFEDLPYLRNLAEVNIERLFKLSRFSKQANMLLFKRFVELYGSSGDRIKL HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE LEGSNGN EECCCCC >Mature Secondary Structure MVDNLSKDTHHIEDKQETSNSIELELYQFLNKLKTGVWLLGIPSWLFGLTDRSMSAFADG CCCCCCCCHHHCCCHHHCCCCHHHHHHHHHHHHCCCEEEEECHHHHHHCCCCHHHHHHHH CLSTREIFQLLTTSFFFISWLYLKPENGSGEEVGLLCQNQASRFELKKRHMISQEYILPF CCCHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCC PYLCQIYHLLNLKHLETIHKFSLNNLRVLSISDFQQTKFGGIIKFNTLLDSPINALRIWR HHHHHHHHHHCHHHHHHHHHHCCCCEEEEEECCCCHHHCCCEEEEHHHHCCCHHHHHHHH QPIVEVDLILHTPYTIELSIPVYDNKRITVIFYAFPLNEREHQLFIEIYSDLDWPKPLLQ CCHHEEEEEEECCEEEEEEEEEECCCEEEEEEEEECCCCCCHHHHEEHHHCCCCCHHHHH ILLHFASCLTLFEDLPYLRNLAEVNIERLFKLSRFSKQANMLLFKRFVELYGSSGDRIKL HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE LEGSNGN EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA