| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231964
Identifier: 17231964
GI number: 17231964
Start: 5356449
End: 5357318
Strand: Reverse
Name: 17231964
Synonym: all4472
Alternate gene names: NA
Gene position: 5357318-5356449 (Counterclockwise)
Preceding gene: 17231965
Following gene: 17231959
Centisome position: 83.53
GC content: 37.7
Gene sequence:
>870_bases ATGACTGGTACTCCATCCTTACAAATACCTATAAAGCAAAATTACCAACCACAAGCAGCTGATACAAATATCGATGCTGA TATTTATTTTTTTACTCGTTTGCAGCAACTTTCCCTAAGTCAAAGAATAAAAATGTTTGTTGCACATGAACGTGGGATAA AAAAATTATGTCTAGCAGGAATTAAATCTCGCCATCGCCATACGTCCTTAGAGGAAATTAGGTGTATATTTACGCGTGCG GTGCTAGGTGATAAATTGACTGCTGATTTCCAACCAATAGGTATTAATGAAAGTATGTGGATTCAAGACTCAATTACCCT TGCAGGTGAACTACACCAAATTTTTGAGTCAATTAATATTCCTTACTATGTTAGTGGTGGTGTCGCTAGTTCTATTCATG GTGAGCCTCGTTCAACCCGTGATTTAGATTTGGTGATAGAAATCCAACCCGACCAAATTGATTTACTAGTAGTGACATTA GAAACTGCGGGCTATTATTGTCCTGTAGGTGCAATTGAGGAATTAAAACGAGGTCGAGAGCAAACGCTCAACATTACTCA TACAGAAACTATTGCTAATGCTGATCTTTATATCACAGATGCTTCACCATTTGCATTATCGCAGATGGCGCGTCGCATTT TACCTGATTTAGATGGTATATCCCCTTTTTGGGTAGCTTCTCCAGAAGATACAATTTTACAAAAGTTGTTATGGAGTCGT CATAGTCAATCAGAAAAACAGTGGCGTGATGTATTGGGAATACTCAAATTACAAGCGCTTAATTTAGATTATGCTTATCT TACACAATGGGCTGAAGACCTCAATTTAGTTGATGCTTTCAGCCGAGCTTTAAGTGAAGCTGGTTTATAA
Upstream 100 bases:
>100_bases TGTCCGTCAAGGTTTTCTCATGGGTGAGAAAGTTTTACGTCCCACAGAAATTATTACATCAAAATCAGAACAGAATTAAA AACAGCAGCCAGAAAAAATC
Downstream 100 bases:
>100_bases TCTTCTTCAACTGGTCGCGGCATTAGTGAGCGATATTGATAATTTAATAAACTTCATCGTGGCTACCAATATCAACCAAT AAAATAACCATTTCTAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTGTPSLQIPIKQNYQPQAADTNIDADIYFFTRLQQLSLSQRIKMFVAHERGIKKLCLAGIKSRHRHTSLEEIRCIFTRA VLGDKLTADFQPIGINESMWIQDSITLAGELHQIFESINIPYYVSGGVASSIHGEPRSTRDLDLVIEIQPDQIDLLVVTL ETAGYYCPVGAIEELKRGREQTLNITHTETIANADLYITDASPFALSQMARRILPDLDGISPFWVASPEDTILQKLLWSR HSQSEKQWRDVLGILKLQALNLDYAYLTQWAEDLNLVDAFSRALSEAGL
Sequences:
>Translated_289_residues MTGTPSLQIPIKQNYQPQAADTNIDADIYFFTRLQQLSLSQRIKMFVAHERGIKKLCLAGIKSRHRHTSLEEIRCIFTRA VLGDKLTADFQPIGINESMWIQDSITLAGELHQIFESINIPYYVSGGVASSIHGEPRSTRDLDLVIEIQPDQIDLLVVTL ETAGYYCPVGAIEELKRGREQTLNITHTETIANADLYITDASPFALSQMARRILPDLDGISPFWVASPEDTILQKLLWSR HSQSEKQWRDVLGILKLQALNLDYAYLTQWAEDLNLVDAFSRALSEAGL >Mature_288_residues TGTPSLQIPIKQNYQPQAADTNIDADIYFFTRLQQLSLSQRIKMFVAHERGIKKLCLAGIKSRHRHTSLEEIRCIFTRAV LGDKLTADFQPIGINESMWIQDSITLAGELHQIFESINIPYYVSGGVASSIHGEPRSTRDLDLVIEIQPDQIDLLVVTLE TAGYYCPVGAIEELKRGREQTLNITHTETIANADLYITDASPFALSQMARRILPDLDGISPFWVASPEDTILQKLLWSRH SQSEKQWRDVLGILKLQALNLDYAYLTQWAEDLNLVDAFSRALSEAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32571; Mature: 32439
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTPSLQIPIKQNYQPQAADTNIDADIYFFTRLQQLSLSQRIKMFVAHERGIKKLCLAG CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKSRHRHTSLEEIRCIFTRAVLGDKLTADFQPIGINESMWIQDSITLAGELHQIFESINI HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCC PYYVSGGVASSIHGEPRSTRDLDLVIEIQPDQIDLLVVTLETAGYYCPVGAIEELKRGRE CEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHCCHH QTLNITHTETIANADLYITDASPFALSQMARRILPDLDGISPFWVASPEDTILQKLLWSR HHEEEEEHHEECCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHH HSQSEKQWRDVLGILKLQALNLDYAYLTQWAEDLNLVDAFSRALSEAGL CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TGTPSLQIPIKQNYQPQAADTNIDADIYFFTRLQQLSLSQRIKMFVAHERGIKKLCLAG CCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKSRHRHTSLEEIRCIFTRAVLGDKLTADFQPIGINESMWIQDSITLAGELHQIFESINI HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCC PYYVSGGVASSIHGEPRSTRDLDLVIEIQPDQIDLLVVTLETAGYYCPVGAIEELKRGRE CEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHCCHH QTLNITHTETIANADLYITDASPFALSQMARRILPDLDGISPFWVASPEDTILQKLLWSR HHEEEEEHHEECCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHH HSQSEKQWRDVLGILKLQALNLDYAYLTQWAEDLNLVDAFSRALSEAGL CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA