| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is pgk [H]
Identifier: 17231623
GI number: 17231623
Start: 4979255
End: 4980457
Strand: Reverse
Name: pgk [H]
Synonym: all4131
Alternate gene names: 17231623
Gene position: 4980457-4979255 (Counterclockwise)
Preceding gene: 17231627
Following gene: 17231622
Centisome position: 77.65
GC content: 46.47
Gene sequence:
>1203_bases GTGTCTAAAAAAACTGTGGCTAGTTTATCTGCTGCTGATATCTCTGGTAAACGCGCTTTAGTGCGTGTTGACTTTAACGT GCCTTTAGACGATCAAGGCAACATCACAGACGATACTCGCATTCGTGCGGCTCTGCCAACCATCCAAGATTTGACGCAAA AGGGCGCTAAGGTTATTCTAGCAAGCCATTTCGGTCGTCCCAAGGGTGTAGATGAGAAGTTGCGTCTTACCCCAGTAGCC AAGCGGCTATCTGAGTTGTTGGGACAAGAAGTTATCAAAACCGATGACTCAATTGGTGATGAAGTTGCGGCTAAGGTGGC TACTTTGCAAAATGGCCAAGTTCTTTTATTAGAAAACGTCCGTTTTTATAAAGAAGAAGAGAAAAACGATCCTGAATTTG CTAAAAAATTAGCGGCTAATGCTGATTTCTACGTAAACGATGCTTTTGGTACTGCACACCGCGCTCATGCGTCTACGGAA GGCGTGACTAAATTCCTCAGCCCATCTGTGGCTGGATATTTGGTTGAGAAAGAATTGCAGTACTTACAAAGTGCGATCGA AAATCCCCAACGTCCTTTAGCAGCCATTATCGGTGGTTCTAAGGTTTCCAGCAAAATCGGTGTGATTGAAACACTACTAG AGAAGTGCGACAAGCTGATCATTGGTGGTGGGATGATTTTCACCTTCTACAAGGCTCGTGGTTTGAATGTGGGTAAATCT CTGGTGGAAGAAGACAAGCTGGAACTGGCGAAGTCTTTGGAAGCTAAAGCCAAGGAACGCGGCGTTAGCTTGTTGTTACC TACAGATGTGGTATTAGCAGATAACTTTGCACCTGATGCCAATTCTCAAACTGTCAGCATTGAAAACATCCCCGATGGTT GGATGGGTTTGGATATCGGCCCTGATTCTGTCAAAGTCTTCCAAGCAGCCCTTGCAGATACCAAAACTGTCATCTGGAAC GGGCCTATGGGTGTGTTTGAGTTTGATAAGTTTGCTGCTGGTACAGAAGCGATCGCTCATACACTAGCAGAGATTGGCAA AACTGGCACAACTACCATCATCGGCGGTGGTGACTCGGTAGCGGCTGTTGAGAAGGTAGGTTTGGCTGATCAAATGAGCC ACATCTCCACCGGCGGCGGCGCTAGCTTAGAGTTACTCGAAGGCAAAGTACTGCCCGGTATCGCTGCTTTAGATGAAGCG TAA
Upstream 100 bases:
>100_bases GTCTTGAACATCTCTGCACCTCCGCACCCCCGACTCCGGTAAAATCTTGATGGTTCTACTTTCAAAACAATAACAAAAAG GCAATCAGGAGGGTTTGGCT
Downstream 100 bases:
>100_bases GAGGCATTAGGGACTAAAGATTAGAGACTAGAGGCTGGGAATTAATTACTAATTACATTCCCTAGCCCCTAACCTCTAGC CTTGTGTAAAAAATATATGC
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MSKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDEKLRLTPVA KRLSELLGQEVIKTDDSIGDEVAAKVATLQNGQVLLLENVRFYKEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTE GVTKFLSPSVAGYLVEKELQYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKS LVEEDKLELAKSLEAKAKERGVSLLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKVFQAALADTKTVIWN GPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA
Sequences:
>Translated_400_residues MSKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDEKLRLTPVA KRLSELLGQEVIKTDDSIGDEVAAKVATLQNGQVLLLENVRFYKEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTE GVTKFLSPSVAGYLVEKELQYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKS LVEEDKLELAKSLEAKAKERGVSLLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKVFQAALADTKTVIWN GPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA >Mature_399_residues SKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDEKLRLTPVAK RLSELLGQEVIKTDDSIGDEVAAKVATLQNGQVLLLENVRFYKEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEG VTKFLSPSVAGYLVEKELQYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSL VEEDKLELAKSLEAKAKERGVSLLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKVFQAALADTKTVIWNG PMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=417, Percent_Identity=46.0431654676259, Blast_Score=351, Evalue=6e-97, Organism=Homo sapiens, GI31543397, Length=417, Percent_Identity=44.3645083932854, Blast_Score=343, Evalue=2e-94, Organism=Escherichia coli, GI1789294, Length=398, Percent_Identity=43.7185929648241, Blast_Score=305, Evalue=2e-84, Organism=Caenorhabditis elegans, GI17508823, Length=419, Percent_Identity=49.1646778042959, Blast_Score=378, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6319857, Length=417, Percent_Identity=49.1606714628297, Blast_Score=372, Evalue=1e-104, Organism=Drosophila melanogaster, GI17136394, Length=412, Percent_Identity=48.0582524271845, Blast_Score=347, Evalue=1e-95, Organism=Drosophila melanogaster, GI24581203, Length=413, Percent_Identity=45.7627118644068, Blast_Score=338, Evalue=3e-93,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 42442; Mature: 42311
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVIL CCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCEEEE ASHFGRPKGVDEKLRLTPVAKRLSELLGQEVIKTDDSIGDEVAAKVATLQNGQVLLLENV ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCC RFYKEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQ HHHHHHCCCCHHHHHHHHCCCCEEEECCCCCHHHHHCCHHHHHHHHCCHHHHHHHHHHHH YLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKS HHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEHHHCCCCHHHH LVEEDKLELAKSLEAKAKERGVSLLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIG HHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCCCCCEEEECCCCCCCEECCCC PDSVKVFQAALADTKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSV CCHHHHHHHHHHCCCEEEECCCCCCEEHHHHHCHHHHHHHHHHHHCCCCCEEEEECCCCC AAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA HHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCC >Mature Secondary Structure SKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVIL CCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCEEEE ASHFGRPKGVDEKLRLTPVAKRLSELLGQEVIKTDDSIGDEVAAKVATLQNGQVLLLENV ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCC RFYKEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQ HHHHHHCCCCHHHHHHHHCCCCEEEECCCCCHHHHHCCHHHHHHHHCCHHHHHHHHHHHH YLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKS HHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEHHHCCCCHHHH LVEEDKLELAKSLEAKAKERGVSLLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIG HHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCCCCCEEEECCCCCCCEECCCC PDSVKVFQAALADTKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSV CCHHHHHHHHHHCCCEEEECCCCCCEEHHHHHCHHHHHHHHHHHHCCCCCEEEEECCCCC AAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA HHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA