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The map label for this gene is 17231627

Identifier: 17231627

GI number: 17231627

Start: 4981889

End: 4982275

Strand: Reverse

Name: 17231627

Synonym: all4135

Alternate gene names: NA

Gene position: 4982275-4981889 (Counterclockwise)

Preceding gene: 17231628

Following gene: 17231623

Centisome position: 77.68

GC content: 36.95

Gene sequence:

>387_bases
ATGAGGCTCATGCTCGACACCCATACGTTTTTGTGGTTTATTGAAGGTAGTTTAAATCTCAGTGATACAGCAAAAAGCCT
CATTGAAGATCAGCAAAATCAAAGATTTTTAAGCATTGCAAGTCTTTGGGAAATATCTATCAAAGTCAGTATTGGCAAGC
TAGAACTGGATATGACCTTTACTGAGTTGGTTAAACAACAGGTTTATGGTAATGCGATTGAATTGCTTGAAATACAGCCA
GCACATTTAGATGAGTTAGCAAAGCTGCCTTTTTACCATAAAGATCCTTTTGATAGGCTGATGATTTCTCAATCTTTGGT
GGAGAGCATACCTATAGTTACTAAAGACAGTGTGTTTGAGGGTTATCCTGTGCAAATATTATGGTGA

Upstream 100 bases:

>100_bases
GAGAAGTGAAAGCATATCCAAAGTTCGGTAGTGCTAAGGGTTTAGTGAAAATTTCAGATGATTTTGATGAGCCATTGGCA
GATTTTGAGGAATATGCTCC

Downstream 100 bases:

>100_bases
ACTATACTGCGCTTATAAAAGTTATTGGTAAGAGTTAAGACTTTTCAGGTTACTGAGTGTAAAGGTTATGCAAAGATAGT
TCGATCGCGATCGCCACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: PilT Protein Domain Protein; PilT Protein Domain-Containing Protein; PilT Protein-Like Protein; PilT Protein-Like; Pilus Retraction Motor Protein PilT; PilT Protein N-Terminal; PilT Protein Domain Containing Protein; PIN Domain Protein; PIN Domain Family Protein

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MRLMLDTHTFLWFIEGSLNLSDTAKSLIEDQQNQRFLSIASLWEISIKVSIGKLELDMTFTELVKQQVYGNAIELLEIQP
AHLDELAKLPFYHKDPFDRLMISQSLVESIPIVTKDSVFEGYPVQILW

Sequences:

>Translated_128_residues
MRLMLDTHTFLWFIEGSLNLSDTAKSLIEDQQNQRFLSIASLWEISIKVSIGKLELDMTFTELVKQQVYGNAIELLEIQP
AHLDELAKLPFYHKDPFDRLMISQSLVESIPIVTKDSVFEGYPVQILW
>Mature_128_residues
MRLMLDTHTFLWFIEGSLNLSDTAKSLIEDQQNQRFLSIASLWEISIKVSIGKLELDMTFTELVKQQVYGNAIELLEIQP
AHLDELAKLPFYHKDPFDRLMISQSLVESIPIVTKDSVFEGYPVQILW

Specific function: Unknown

COG id: COG3744

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14813; Mature: 14813

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLMLDTHTFLWFIEGSLNLSDTAKSLIEDQQNQRFLSIASLWEISIKVSIGKLELDMTF
CEEEEECCEEEEEEECCCCHHHHHHHHHHHHCCCHHEEEEEEEEEEEEEEEEEEEECCHH
TELVKQQVYGNAIELLEIQPAHLDELAKLPFYHKDPFDRLMISQSLVESIPIVTKDSVFE
HHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
GYPVQILW
CCCEEEEC
>Mature Secondary Structure
MRLMLDTHTFLWFIEGSLNLSDTAKSLIEDQQNQRFLSIASLWEISIKVSIGKLELDMTF
CEEEEECCEEEEEEECCCCHHHHHHHHHHHHCCCHHEEEEEEEEEEEEEEEEEEEECCHH
TELVKQQVYGNAIELLEIQPAHLDELAKLPFYHKDPFDRLMISQSLVESIPIVTKDSVFE
HHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
GYPVQILW
CCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA