| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is gltI [H]
Identifier: 17231622
GI number: 17231622
Start: 4978161
End: 4979066
Strand: Reverse
Name: gltI [H]
Synonym: all4130
Alternate gene names: 17231622
Gene position: 4979066-4978161 (Counterclockwise)
Preceding gene: 17231623
Following gene: 17231620
Centisome position: 77.63
GC content: 41.17
Gene sequence:
>906_bases ATGTATAAAAATTTGGCGATCGCTCTTTTCAGTTTGACGTTGACGACAGTTATACCAGGTGCAGCATTAGCAGAAACGGT GATGCAGAAAGTCTCTCGTACAGGGGTGCTAACAGCTGGTACTAGTAAAGATGCCATGCCTTTTGCCTATACTAATGCTC AGGGACAGTTGACTGGTTACTCTGTCGATATGTTGTCTGAGATTAAGCGGCATTTAGAAAAAGAATTAGGTAAAAAAATA CAACTAAAATTAGTGCCATTAACTCCTGCACAAAGGATTCCCAAAATAGTTAATCGGCAAGTTGATATTGTTTGTGATGC TAGTAGTTTTACCTGGGAAAGAGATAAAAAGGTAGATTTTTCTGTCAGCTATGGGGCGACTGGTACTCAATTATTAGTGA AGTCTGGCAGCAATCTTGGTTCCCCTGAATCCCTCATTGGTAAACGCATTGGTGTGTTAGCACAAACTACCAATGAACAG GCTATCAAGCGGGTACAACCCCAAGCTAAACTGGTGTATTTGAAAAGTCGTTCAGAAGGTTACACGGCTTTGCAAGAAGG CAAAATAGATGCTTTCTCATCTGATAGCATTTTGTTAGAGGGTTGGTTGCAAAGGGTCGAAAATCCTGATGATTTTGCGA TTGTCCCCGATCGCCCTTATTCACGAGAGGGTATTGCCTGCATGGTTCCTGAAGATAACTCTAAATTTTTGGATGCAGTC AATTATTCTCTAGTGAAGTTTATGCAGGGATTTGTCAATGGTGATACTCGATATGTGACGATTTTTGATCGCTGGTTTGG GGCTAAAGGTGCTTTGCTGTTGAATCGGGATTTGCGCGATTTAATGAAAGAAACGATGCAGTTGTTTATCGAGTTTCGGG AAGAAATTCCTCAGCGTGAACTTTAA
Upstream 100 bases:
>100_bases AAAAATATATGCAGCCGAAATGGTTAGAGTAGACGCAAAAGCTACAAAAGCCAGAGGATAATAACTAATGACGATTAACT ATTGACTAATAACTACAAAT
Downstream 100 bases:
>100_bases CTTTTAGATGGTAATAGGTAATAGGTGATTGGCAATTGAGAATAAATTTTCACCAATTACCCATTACTCATTACCGTATT AGCCAGTTTTTTGGCTGCAT
Product: binding protein of ABC transporter component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MYKNLAIALFSLTLTTVIPGAALAETVMQKVSRTGVLTAGTSKDAMPFAYTNAQGQLTGYSVDMLSEIKRHLEKELGKKI QLKLVPLTPAQRIPKIVNRQVDIVCDASSFTWERDKKVDFSVSYGATGTQLLVKSGSNLGSPESLIGKRIGVLAQTTNEQ AIKRVQPQAKLVYLKSRSEGYTALQEGKIDAFSSDSILLEGWLQRVENPDDFAIVPDRPYSREGIACMVPEDNSKFLDAV NYSLVKFMQGFVNGDTRYVTIFDRWFGAKGALLLNRDLRDLMKETMQLFIEFREEIPQREL
Sequences:
>Translated_301_residues MYKNLAIALFSLTLTTVIPGAALAETVMQKVSRTGVLTAGTSKDAMPFAYTNAQGQLTGYSVDMLSEIKRHLEKELGKKI QLKLVPLTPAQRIPKIVNRQVDIVCDASSFTWERDKKVDFSVSYGATGTQLLVKSGSNLGSPESLIGKRIGVLAQTTNEQ AIKRVQPQAKLVYLKSRSEGYTALQEGKIDAFSSDSILLEGWLQRVENPDDFAIVPDRPYSREGIACMVPEDNSKFLDAV NYSLVKFMQGFVNGDTRYVTIFDRWFGAKGALLLNRDLRDLMKETMQLFIEFREEIPQREL >Mature_301_residues MYKNLAIALFSLTLTTVIPGAALAETVMQKVSRTGVLTAGTSKDAMPFAYTNAQGQLTGYSVDMLSEIKRHLEKELGKKI QLKLVPLTPAQRIPKIVNRQVDIVCDASSFTWERDKKVDFSVSYGATGTQLLVKSGSNLGSPESLIGKRIGVLAQTTNEQ AIKRVQPQAKLVYLKSRSEGYTALQEGKIDAFSSDSILLEGWLQRVENPDDFAIVPDRPYSREGIACMVPEDNSKFLDAV NYSLVKFMQGFVNGDTRYVTIFDRWFGAKGALLLNRDLRDLMKETMQLFIEFREEIPQREL
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=266, Percent_Identity=28.5714285714286, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1788228, Length=267, Percent_Identity=24.7191011235955, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787085, Length=251, Percent_Identity=27.0916334661355, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787088, Length=225, Percent_Identity=28.8888888888889, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788648, Length=172, Percent_Identity=30.8139534883721, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1788649, Length=270, Percent_Identity=24.4444444444444, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 33629; Mature: 33629
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKNLAIALFSLTLTTVIPGAALAETVMQKVSRTGVLTAGTSKDAMPFAYTNAQGQLTGY CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCCCEECC SVDMLSEIKRHLEKELGKKIQLKLVPLTPAQRIPKIVNRQVDIVCDASSFTWERDKKVDF CHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHCCCEEEEECCCCCCCCCCCCEEE SVSYGATGTQLLVKSGSNLGSPESLIGKRIGVLAQTTNEQAIKRVQPQAKLVYLKSRSEG EEECCCCCCEEEEECCCCCCCCHHHHHHHHHHEEECCCHHHHHHCCCCEEEEEEECCCCC YTALQEGKIDAFSSDSILLEGWLQRVENPDDFAIVPDRPYSREGIACMVPEDNSKFLDAV CHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCCHHHHHH NYSLVKFMQGFVNGDTRYVTIFDRWFGAKGALLLNRDLRDLMKETMQLFIEFREEIPQRE HHHHHHHHHHHHCCCEEEEEEEEHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCC L C >Mature Secondary Structure MYKNLAIALFSLTLTTVIPGAALAETVMQKVSRTGVLTAGTSKDAMPFAYTNAQGQLTGY CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCCCEECC SVDMLSEIKRHLEKELGKKIQLKLVPLTPAQRIPKIVNRQVDIVCDASSFTWERDKKVDF CHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHCCCEEEEECCCCCCCCCCCCEEE SVSYGATGTQLLVKSGSNLGSPESLIGKRIGVLAQTTNEQAIKRVQPQAKLVYLKSRSEG EEECCCCCCEEEEECCCCCCCCHHHHHHHHHHEEECCCHHHHHHCCCCEEEEEEECCCCC YTALQEGKIDAFSSDSILLEGWLQRVENPDDFAIVPDRPYSREGIACMVPEDNSKFLDAV CHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCCHHHHHH NYSLVKFMQGFVNGDTRYVTIFDRWFGAKGALLLNRDLRDLMKETMQLFIEFREEIPQRE HHHHHHHHHHHHCCCEEEEEEEEHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]